Query= MSMg01no527_b18.b1 MSMg01no527_b18.b1 CHROMAT_FILE:
MSMg01no527_b18.b1 PHD_FILE: MSMg01no527_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:14 2005
(606 letters)
>mm_chr8_60243483_60244488
Length = 1006
Score = 1133 bits (586), Expect = 0.0
Identities = 598/602 (99%)
Strand = Plus / Plus
Query: 5 gaattccatcccaggtacacttccgtgaaccatcaaatgttgaccgcatgtgttctgctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatcccaggtacacttccgtgaaccatcaaatgttgaccgcatgtgttctgctt 264
Query: 65 taacagtgcattttgtctacacatcttttgtccagagtctttaaggatgactgtgtgttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taacagtgcattttgtctacacatcttttgtccagagtctttaaggatgactgtgtgttc 324
Query: 125 gggtttcctgtcttgattttcatcggttttccctccttgttagctgactaatgtttaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggtttcctgtcttgattttcatcggttttccctccttgttagctgactaatgtttaagg 384
Query: 185 agtgcagaaacacagtcattagctctcttgctgttaagtccttccagtgttccttatcag 244
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 385 agtgcagaaacacagtcattagctctcttgctgttaagtccttccggtgttcctgataag 444
Query: 245 gaacacctttccattttcccaaactgtgtaaggctgacacagtagactagtctgagaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaacacctttccattttcccaaactgtgtaaggctgacacagtagactagtctgagaatc 504
Query: 305 acttcactaagttttcagtggtgcgatagagttctggtaaatattgactgctttccttta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acttcactaagttttcagtggtgcgatagagttctggtaaatattgactgctttccttta 564
Query: 365 tatcttcgtttgcaagttacaaagcaatttcatgtttattatcatacttcaccaatgcca 424
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatcttcatttgcaagttacaaagcaatttcatgtttattatcatacttcaccaatgcca 624
Query: 425 cagccctgagaggaacctttagaggaatgggtattggcccaatgtcaaacaggaatgaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagccctgagaggaacctttagaggaatgggtattggcccaatgtcaaacaggaatgaaa 684
Query: 485 ggcagcagcagctgctttcatgaccaaccaggcatatattatacctcatttctttttaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggcagcagcagctgctttcatgaccaaccaggcatatattatacctcatttctttttaat 744
Query: 545 acccagaacacacatactgagttggatttagagagggtgttcaccatgcataggggaaga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acccagaacacacatactgagttggatttagagagggtgttcaccatgcataggggaaga 804
Query: 605 ga 606
||
Sbjct: 805 ga 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_b18.g1 MSMg01no527_b18.g1 CHROMAT_FILE:
MSMg01no527_b18.g1 PHD_FILE: MSMg01no527_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:14 2005
(592 letters)
>mm_chr8_60250504_60251496
Length = 993
Score = 994 bits (514), Expect = 0.0
Identities = 523/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Minus
Query: 68 atttccaaatcctattgctaatgactttacccgcacatcattcaccttgggatgaaagcc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 atttccaaatcctattgctaatgactttacccgcacatcattcaccttgggatgaaagcc 934
Query: 128 aatcatgaccaagaagcatatattctggattttcagggacagtcatggtttatgtctact 187
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 aatcataaccaagaagcatatattctggattttcagggacagtcatggtttatgtctact 874
Query: 188 tactatgtaactattcatagtgtcttcctttgctcttaaaaaatgacctgaattatgtaa 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 tactatgtaactattcatagtgtcttcctttgctcttaaaaaatgacctgaattatgtaa 814
Query: 248 cacattgaatagtcaacttatttataatctactcaggctgtgtatgattcctctgtggga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 cacattgaatagtcaacttatttataatctactcaggctgtgtatgattcctctgtggga 754
Query: 308 attgctaaagaagtcttttgcttcttcatgtctgcaagaaatccgctagccttccttccc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 attgctaaagaagtcttttgcttcttcatgtctgcaagaaatccgctagccttccttccc 694
Query: 368 tcccagtgggaccagaatatagtcattctactgacgactttccatcgagtttacatgaga 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tcccagtgggaccagaatatagtcattctactgacgactttccatcgagtttacatgaga 634
Query: 428 gttgacaggtttttaaatgaagggttatctcccagatttcgtttatctacctaccccccc 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gttgacaggtttttaaatgaagggttatctcccagatttcgtttatctacctaccccccc 574
Query: 488 -aaaaaagaagttgcagaattaataaaacaataatttaaatggatttttaaatagtttaa 546
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 573 aaaaaaagaagttgcagaattaataaaacaataatgtaaatggatttttaaatagtttaa 514
Query: 547 attttctattgaaatgtgagactaagacatctcagacttctctgag 592
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 attttctattgaaatgtgagactaagacatctcagacttctctgag 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 993
Length adjustment: 10
Effective length of query: 582
Effective length of database: 983
Effective search space: 572106
Effective search space used: 572106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
