Query= MSMg01no528_b05.b1 MSMg01no528_b05.b1 CHROMAT_FILE:
MSMg01no528_b05.b1 PHD_FILE: MSMg01no528_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:34 2005
(647 letters)
>mm_chr8_35387767_35388813
Length = 1047
Score = 932 bits (482), Expect = 0.0
Identities = 485/486 (99%)
Strand = Plus / Minus
Query: 162 ctccttgacttgggccgatttcaaagtattcactcttaacaagcaacgacaacgcagaga 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ctccttgacttgggccgatttcaaagtattcactcttaacaagcaacgacaacgcagaga 988
Query: 222 ttccctcttgaaagagccctgcatgtgttcagaatccagcaaacctcaggcatcctctct 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 ttccctcttgaaagagccctgcatgtgttcagaatccagcaaacctcaggcatcctctct 928
Query: 282 ctgcctcctcagtactgcggttacaggtgcacgcggctatgtccagagtttgccctgggt 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 ctgcctcctcagtactgcggttacaggtgcacgcggctatgtccagagtttgccctgggt 868
Query: 342 actctggataggccgagctctatccagaatgaatgtgaccacttaagggaggagttacag 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 actctggataggccgagctctatccagaatgaatgtgaccacttaagggaggagttacag 808
Query: 402 taagacctgtggataccatcctcagcagtgacctatggactggcaggaaaagaaagaaaa 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 taagacctgtggataccatcctcagcagtgacctatggactggcaggaaaagaaagaaaa 748
Query: 462 aaaaagtctacatgggggtatggacttagcatttcttgcagtaggggatgtatagaaaat 521
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aaaaagactacatgggggtatggacttagcatttcttgcagtaggggatgtatagaaaat 688
Query: 522 agagtacaaactaatccaagctaaaatggaaccaacatttggagtccatggaaagaacca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agagtacaaactaatccaagctaaaatggaaccaacatttggagtccatggaaagaacca 628
Query: 582 gacagggaggaaagagagagaagggtagatgtgtcggaagataaccctttgggtcccatc 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gacagggaggaaagagagagaagggtagatgtgtcggaagataaccctttgggtcccatc 568
Query: 642 tttgag 647
||||||
Sbjct: 567 tttgag 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_b05.g1 MSMg01no528_b05.g1 CHROMAT_FILE:
MSMg01no528_b05.g1 PHD_FILE: MSMg01no528_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:34 2005
(671 letters)
>mm_chr8_35252086_35253156
Length = 1071
Score = 1288 bits (666), Expect = 0.0
Identities = 671/674 (99%), Gaps = 3/674 (0%)
Strand = Plus / Plus
Query: 1 accctcccttggagattgtcaattaggtaatctctcctactcaggtttatgattaaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accctcccttggagattgtcaattaggtaatctctcctactcaggtttatgattaaggtg 260
Query: 61 aattagaaaattagtggcacttaaactggttatgagagatgcctgagcttgggtgggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattagaaaattagtggcacttaaactggttatgagagatgcctgagcttgggtgggcct 320
Query: 121 gacaaggcataactacgctctgcagcacttcatatgagccttgaaccttgtctcccccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaaggcataactacgctctgcagcacttcatatgagccttgaaccttgtctcccccag 380
Query: 181 cttcttggctgggcagaatttcattcctgttaatgctgtcattgatagagcagctaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcttggctgggcagaatttcattcctgttaatgctgtcattgatagagcagctaattg 440
Query: 241 ttaactcaaaggacaaggagggggagaagtctccaaacttatccgaactttgggatgata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaactcaaaggacaaggagggggagaagtctccaaacttatccgaactttgggatgata 500
Query: 301 atcaggcatgcctttctttcaaattctttctcaataagcacaacaaacacaaacagaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcaggcatgcctttctttcaaattctttctcaataagcacaacaaacacaaacagaaac 560
Query: 361 tttggaaatttataagggaaagagaatggggtgacccgatcaacacactcccttagggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttggaaatttataagggaaagagaatggggtgacccgatcaacacactcccttagggat 620
Query: 421 agccacgtgacactggcattcagtaagaccaattgataaccagtctaaggacatagctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agccacgtgacactggcattcagtaagaccaattgataaccagtctaaggacatagctac 680
Query: 481 tgcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 740
Query: 541 ttcttcttcttc---atttatttatttatttatttattttatgtatatgagtacactgtg 597
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcttcttcttcttcatttatttatttatttatttattttatgtatatgagtacactgtg 800
Query: 598 agccttcatgtggttgttgggaattgaattttagaatctctgcttgctccggttgcccct 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agccttcatgtggttgttgggaattgaattttagaatctctgcttgctccggttgcccct 860
Query: 658 gctcgctccgctcc 671
||||||||||||||
Sbjct: 861 gctcgctccgctcc 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
