Query= MSMg01no528_d01.b1 MSMg01no528_d01.b1 CHROMAT_FILE:
MSMg01no528_d01.b1 PHD_FILE: MSMg01no528_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:43 2005
(402 letters)
>mm_chr8_130203585_130204386
Length = 802
Score = 748 bits (387), Expect = 0.0
Identities = 396/399 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcacaaatatcagcattatagctccagaactttcctgtaattttgagattgtt 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcacaaagataagcattatagctccagaactttcctgtaattttgagattgtt 263
Query: 64 tcaatttttcattacaaagaatctgtaaggaaggtaaattctacaaggatgttgtaaatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcaatttttcattacaaagaatctgtaaggaaggtaaattctacaaggatgttgtaaatt 323
Query: 124 aatacacggtgtggctttctagtgagtgattctaagccaaaagctttacagaatcttcta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aatacacggtgtggctttctagtgagtgattctaagccaaaagctttacagaatcttcta 383
Query: 184 gggatttttgcaaacacacacatacagcccacatacagctgtggcctctgtttgtttgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gggatttttgcaaacacacacatacagcccacatacagctgtggcctctgtttgtttgtt 443
Query: 244 gagagggttccagcagagaagtgtggaagctgagccatggagcaggccggtgctcactgg 303
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 gagagggttccagcagagaagtgtggaagctgagccatggagcaggccagtgctcactgg 503
Query: 304 catctgtccctaaagaatgtttcatgggacatttgctggctcctcttgatacattagctc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catctgtccctaaagaatgtttcatgggacatttgctggctcctcttgatacattagctc 563
Query: 364 tttgtcttattgcaacaacagaatacctgactgaaggga 402
|||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttgtcttattgcaacaacagaatacctgactgaaggga 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_d01.g1 MSMg01no528_d01.g1 CHROMAT_FILE:
MSMg01no528_d01.g1 PHD_FILE: MSMg01no528_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:43 2005
(620 letters)
>mm_chr8_130362815_130363833
Length = 1019
Score = 1114 bits (576), Expect = 0.0
Identities = 609/620 (98%), Gaps = 1/620 (0%)
Strand = Plus / Minus
Query: 1 tttgtttacacatcctatctttgagcacagcccacaaacccccactttaatgatcttctc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 819 tttgtttacacatcctatctttgagcagagcccacaaacccccactttaatgatcttctc 760
Query: 61 ttctttgaatgacactgaggaagctatgcgacaggcagggccaagctggacccaccttgc 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 759 ttctttgaatgacactgaggaagctatgtgacaggcagggccaagctggacccaccttgc 700
Query: 121 tgtctgctcctctcacatgcgctgtgacagtctcctatgccactacctcacatatttact 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tgtctgctcctctcacatgctctgtgacagtctcctatgccactacctcacatatttact 640
Query: 181 gcacagatctgcagcagaacaaggggctttgcggaagactacgtgctttggggcacagat 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 639 gcacagatctgcagcagaacaaggggctttgcggaagactatgtgctttggggcacagat 580
Query: 241 ctttccatgcctgcatacttcatgtggtcggacaaatcaccttccagtacactgtcagta 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ctttccatgcctgtatacttcatgtggtcggacaaatcaccttccagtacactgtcagta 520
Query: 301 gagatccagggccatcggttcatttggagaggtacatgctcagttgcccatttctttagc 360
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 519 gagatccagggccatcggttcatttggagatgtacatgctcagttgcccatttcttcagc 460
Query: 361 tgactactattctgcctcttttttcctgtagtcttcatattctttcccctagtcttcctg 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tgactgctattctgcctcttttttcctgtagtcttcatattctttcccctagtcttcctg 400
Query: 421 cactatgccagcccatgctcttgagtaggcaatttgaaacaccaatgcatttgaggataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cactatgccagcccatgctcttgagtaggcaatttgaaacaccaatgcatttgaggataa 340
Query: 481 ttggaatgtgatccatttgagttaaattttgttcctcttagaggggcttagctgcttaga 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 339 ttggaatgtgatccatttgagttaaattttgtttctcttagaggggcttagctgcttaga 280
Query: 541 tattttttcccccctgattcctctgctggggcactgggactagcagcttcatcatccatc 600
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tattttt-cccctctgattcctctgctggggcactgggactagcagcttcatcatccatc 221
Query: 601 attagcacacaggcaataag 620
||||||||||||||||||||
Sbjct: 220 attagcacacaggcaataag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1019
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1009
Effective search space: 615490
Effective search space used: 615490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
