Query= MSMg01no529_b20.b1 MSMg01no529_b20.b1 CHROMAT_FILE:
MSMg01no529_b20.b1 PHD_FILE: MSMg01no529_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:56 2005
(645 letters)
>mm_chr8_68879846_68880890
Length = 1045
Score = 1218 bits (630), Expect = 0.0
Identities = 638/642 (99%), Gaps = 3/642 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttccctcctattgggttgttgtgtccaacttcgatataaaagtttttgcttt 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattctttccctcttattgggttgttgtgtccaacttcgatataaaagtttttgcttt 266
Query: 64 atcttatttgtcatgtttcattgttatctcttagaatcctattcttttctaagagacagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atcttatttgtcatgtttcattgttatctcttagaatcctattcttttctaagagacagg 326
Query: 124 aaggagtggatctggaggggattggaggtgaagaggaagtgagaggagttaaactatagc 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 327 aaggagtggatctggaggggattggaggtgaagaggaagtgagagga---aaactatagc 383
Query: 184 cgggatatattgtaagagaaaaatctattttcaaaagataaaaaagaagatgatgaagtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgggatatattgtaagagaaaaatctattttcaaaagataaaaaagaagatgatgaagtt 443
Query: 244 agcatgtagaaaagagaaaaaaaatcatgtaaaaatcacagaaaatgacaagattttgaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agcatgtagaaaagagaaaaaaaatcatgtaaaaatcacagaaaatgacaagattttgaa 503
Query: 304 agttcttttgtgaattctttgatactcctaaatgtgtcagccttgtgtttttcaaccaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agttcttttgtgaattctttgatactcctaaatgtgtcagccttgtgtttttcaaccaaa 563
Query: 364 catctaaaaatttttactgtgatgtaaaatgaggataataccattctagaatcaaactta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catctaaaaatttttactgtgatgtaaaatgaggataataccattctagaatcaaactta 623
Query: 424 tgtcacctaggtatgaagttgacaatttatttaagttgttgtaaataacagaaggtgaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtcacctaggtatgaagttgacaatttatttaagttgttgtaaataacagaaggtgaca 683
Query: 484 gctcaggcttttatctatacatagatgactttctaaaaaatatcatgcataaacacagta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gctcaggcttttatctatacatagatgactttctaaaaaatatcatgcataaacacagta 743
Query: 544 caaatataattagatattgtcatggttacttttctacatgctgtgataaaatattctaac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caaatataattagatattgtcatggttacttttctacatgctgtgataaaatattctaac 803
Query: 604 aaaagcaacttaagggaggaatggtttttcctgatgtagaat 645
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaaagcaacttaagggaggaatggtttttcctgatgtagaat 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_b20.g1 MSMg01no529_b20.g1 CHROMAT_FILE:
MSMg01no529_b20.g1 PHD_FILE: MSMg01no529_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:57 2005
(661 letters)
>mm_chr8_69040071_69041132
Length = 1062
Score = 1241 bits (642), Expect = 0.0
Identities = 657/662 (99%), Gaps = 1/662 (0%)
Strand = Plus / Minus
Query: 1 attccaaagggagctgcttgtatgcgtctattaccccgggactgtggagaaagactaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 attccaaagggagctgcttgtatgcgtctattaccccgggactgtggagaaagactaagg 803
Query: 61 ataatgacttatctctgtccctttagccttgagaacagatgatattaggcagactcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ataatgacttatctctgtccctttagccttgagaacagatgatattaggcagactcaaga 743
Query: 121 tggaatctcagccaagaagacagagaccaaatgaaggaagacctgacagactttctacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tggaatctcagccaagaagacagagaccaaatgaaggaagacctgacagactttctacct 683
Query: 181 tcacatatttaccttgtgggtccaagtgaagagttggtgctttttatgaaaagaggcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcacatatttaccttgtgggtccaagtgaagagttggtgctttttatgaaaagaggcttc 623
Query: 241 taaatgcctattacgctattgactgtcaactcatctttagcatacaggcctgtggtgact 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 taaatgcttattacgctattgactgtcaactcatctttagcatacaggcctgtggtgact 563
Query: 301 ttaagacacaaatctcagcatctggacacatcacctaaagtccc-agctctcaacacaat 359
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 ttaagacacaaatctcagcgtctggacacatcacctaaagtccccagctctcaacacaat 503
Query: 360 tgcatctaggattaaacatcaacccaatgaactgatggtgtgtgtgcacatatatttatt 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgaatctaggattaaacatcaacccaatgaactgatggtgtgtgtgcacatatatttatt 443
Query: 420 tggcctttgtgcttttctgacagttcccatgtgcttttattctttcagagtctggccact 479
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tggcctgtgtgcttttctgacagttcccatgtgcttttattctttcagagtctggccact 383
Query: 480 ttgttaatgaggccacactgttaatgtattgctacaatttttctttcctgggtatttaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttgttaatgaggccacactgttaatgtattgctacaatttttctttcctgggtatttaca 323
Query: 540 ctagatttttaaaacttgtgctgaacagtaatgagtttaaatttacccactttaaatagg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctagatttttaaaacttgtgctgaacagtaatgagtttaaatttacccactttaaatagg 263
Query: 600 aaaacatggaaatgtcgaatataagtgaacaaagagaatcttgaaataagttttgaagca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaaacatggaaatgtcgaatataagtgaacaaagagaatcttgaaataagttttgaagca 203
Query: 660 aa 661
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space: 684852
Effective search space used: 684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
