Query= MSMg01no529_p08.b1 MSMg01no529_p08.b1 CHROMAT_FILE:
MSMg01no529_p08.b1 PHD_FILE: MSMg01no529_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:06 2005
(630 letters)
>mm_chr8_118738201_118739230
Length = 1030
Score = 1166 bits (603), Expect = 0.0
Identities = 620/626 (99%), Gaps = 2/626 (0%)
Strand = Plus / Minus
Query: 5 gaattcacatttcatgtgactgagcaaaatgacacaagccagggcactcaataaagtgag 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gaattcacatttcaggtgactgagcaaaatgacacaagccagggcactcaataaagtgag 656
Query: 65 ctgggtttgaacttagatcatgaggcagttgaactgtgggaactgggcaaagcccttcac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ctgggtttgaacttagatcatgaggcagttgaactgtgggaactgggcaaagcccttcac 596
Query: 125 tccccatctctggtccccatatctgtatggtaaccctgtgggattgttgtgaggattaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tccccatctctggtccccatatctgtatggtaaccctgtgggattgttgtgaggattaaa 536
Query: 185 ggtgtaaatgatgggaatgttaggcaaatggaaatgtttgtcctaagtgtcccaaacgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggtgtaaatgatgggaatgttaggcaaatggaaatgtttgtcctaagtgtcccaaacgtc 476
Query: 245 ttgcagagcagaccttaaccttttatgtttgtcacatttcaaatcatgttttcaaaagaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttgcagagcagaccttaaccttttatgtttgtcacatttcaaatcatgttttcaaaagaa 416
Query: 305 gagttctcaaactccatatcccatactgaccatataaatatataaaatagataacatgga 364
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gatttctcaaactccatatcccatactgaccatataaatatataaaatagataacatgga 356
Query: 365 atatgctatacaatgtgtatgcaaatatactcatgcaagtataaatatatctatgcatac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atatgctatacaatgtgtatgcaaatatactcatgcaagtataaatatatctatgcatac 296
Query: 425 atgcatagatatatacatatggaatatatcaaatatacataatttatatgcctgtgtaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atgcatagatatatacatatggaatatatcaaatatacataatttatatgcctgtgtaag 236
Query: 485 tatacatacacatatatagccacttttagaagaaactaanaacattgatgtttggggacc 544
||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| |
Sbjct: 235 tatacatacacatatatag-cac-tttagaagaaactaagaacattgatgtttggggatc 178
Query: 545 atagtgatgatatatacatacacatatatattcatacatctacatatatagatatacatg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 atagtgatgatatatacatacacatatatattcatacatctacatatatagatatacatg 118
Query: 605 tcacatatatagagaggcatatatac 630
||||||||||||||||||||||||||
Sbjct: 117 tcacatatatagagaggcatatatac 92
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_p08.g1 MSMg01no529_p08.g1 CHROMAT_FILE:
MSMg01no529_p08.g1 PHD_FILE: MSMg01no529_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:06 2005
(627 letters)
>mm_chr8_118600237_118601260
Length = 1024
Score = 1162 bits (601), Expect = 0.0
Identities = 620/627 (98%), Gaps = 3/627 (0%)
Strand = Plus / Plus
Query: 1 tccagaaccatgaaccaatatatatatatagctctttaacagataaactaaccacctcag 60
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tccagaaccatgaaccaatatatatata--gctctttaacagataaactaaccacctcag 258
Query: 61 gtatctcattatagtgatggacagtagactaacacagatgtagcctcacagagattctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtatctcattatagtgatggacagtagactaacacagatgtagcctcacagagattctgt 318
Query: 121 taggaaataaatgaaatggcattttacatggaaaggggaaatgcccatagtctggcctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 taggaaataaatgaaatggcattttacatggaaaggggaaatgcccatagtctggcctaa 378
Query: 181 tcattccattgctaaactgtgtatgcttttgttgttgttttggttgattttttttttttt 240
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcatttcattgctaaactgtgtatgcttttgttgttgttttggttgatttttttttttt- 437
Query: 241 gagtgagtaagtaacccaaatccttggggccttgtgtatccatgaaagaagccaatttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gagtgagtaagtaacccaaatccttggggccttgtgtatccatgaaagaagccaatttgg 497
Query: 301 agtattcagatatataaaatagataaagtaaaagttcactgatactaattaagtctgaga 360
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 498 ggtattcagatatataaaatagataaagtaaaagtttactgatactaattaagtctgaga 557
Query: 361 caattctttggtctgcataggagttgagacttataaaagatgaaaaaaatgtgcctttta 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 558 caattctttggtctgcatagaagttgagacttataaaagatgaaaaaaatgtgcctttta 617
Query: 421 atgatggatgctttggtcttcttgtttgtttttacatgaagaattggatgctagctgggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 atgatggatgctttggtcttcttgtttgtttttacatgaagaattggatgctagctgggt 677
Query: 481 gttttgaatggtgagagcctacgaagtggaaggtgaggagttacattcccagcaccgtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gttttgaatggtgagagcctacgaagtggaaggtgaggagttacattcccagcaccgtca 737
Query: 541 atgggggaaaggggctgagtatctgatacggtatggtacaagggatcttcaacatttgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 atgggggaaaggggctgagtatctgatacggtatggtacaagggatcttcaacatttgtc 797
Query: 601 caagttgatcaacatcttgattttata 627
|||||||||||||||||||||||||||
Sbjct: 798 caagttgatcaacatcttgattttata 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1024
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1014
Effective search space: 625638
Effective search space used: 625638
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
