Query= MSMg01no531_b05.b1 MSMg01no531_b05.b1 CHROMAT_FILE:
MSMg01no531_b05.b1 PHD_FILE: MSMg01no531_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:36 2005
(521 letters)
>mm_chr8_100643273_100644195
Length = 923
Score = 930 bits (481), Expect = 0.0
Identities = 509/519 (98%), Gaps = 2/519 (0%)
Strand = Plus / Minus
Query: 5 gaattcttagtatttcctatgtggaggttggaaacaagagttcagccaatcattcctctc 64
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gaattcttagtaatgcatatgtggaggttggaaacaagagttcagccaatcattcctctc 664
Query: 65 ttcatctttagagcatgtgcaagtatgaaaacttgactcagggggctatggaaagagaat 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttcacctttagagcatgtgcaagtatgaaaacttgactcagggggctatggaaagagaat 604
Query: 125 tgaagaaaacagctctgagatgaacaca--gtgtctgtaaacagctcccagattttttgt 182
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 603 tgaagaaaacagctctgagatgaacacagtgtgtctgtaaacagctcccagatttttttt 544
Query: 183 tgaatgttatgtaacatagagaataagggcatacaatgagtggagcacatgtacagctcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgaatgttatgtaacatagagaataagggcatacaatgagtggagcacatgtacagctcc 484
Query: 243 ctgccctcacaggatacacagataacatgtattcctttcctaaaatagttcttcatgata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctgccctcacaggatacacagataacatgtattcctttcctaaaatagttcttcatgata 424
Query: 303 gcacagaattgtaaaactagtttcttcgagatagaggcaagatgaccccaaacaatgaat 362
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 423 gcacagaattgtaaaaccagtttcttagagatagaggcaagatgaccccaaacaatgaat 364
Query: 363 cctgggattcacagtaagatcctatctcagaaacaaaacaaaattctttaagaattggta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cctgggattcacagtaagatcctatctcagaaacaaaacaaaattctttaagaattggta 304
Query: 423 tgtttgctatttagttgtgtgtcaaacaacatgctacatactatgaataaatgttttaat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 303 tgtttgctatttagttgtgtgtcaaacaacatgctacatactatgaataaatgttttgat 244
Query: 483 ataagccaaccaaagcaggaatgagctgctcctcataag 521
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ataagccaaccaaagcaggaatgagctgctcctcataag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 923
Length adjustment: 10
Effective length of query: 511
Effective length of database: 913
Effective search space: 466543
Effective search space used: 466543
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_b05.g1 MSMg01no531_b05.g1 CHROMAT_FILE:
MSMg01no531_b05.g1 PHD_FILE: MSMg01no531_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:36 2005
(379 letters)
>mm_chr8_100481171_100481949
Length = 779
Score = 671 bits (347), Expect = 0.0
Identities = 371/379 (97%)
Strand = Plus / Plus
Query: 1 tttctaaggaattgtttttattacctggaactaattttcaaaggcatgcctaatagattg 60
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 201 tttctaaggaattgtttttattacctggagctaattttcaaaggcatgtctaatagattg 260
Query: 61 taaataaatcatgattggtatttataaaaatatctacacaaaaccattctggcttgtttt 120
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 261 taaataaatcatgattggtatttatgaaaatatctacacaaagccattctggcttgtttt 320
Query: 121 cataatactctctcttttaaaaaaaattgatgcatatgtacatttatctacatgtatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cataatactctctcttttaaaaaaaattgatgcatatgtacatttatctacatgtatgtc 380
Query: 181 taggtagcactgatatgccttgtgcccacagatgttagcagaaggtgttgaatctcctgg 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 taggtagcactgatatgccttgtgcccacagaggttagcagaaggtgttgaatctcctgg 440
Query: 241 aataggagctaacactattgtgaactgccatgtttatgccaagatacgaacacatttcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aataggagctaacactattgtgaactgccatgtttatgccaagatacgaacacatttcct 500
Query: 301 tttgtcgagcagcaagaactcttgaccactaagctatcttaccagtccttaacaatacta 360
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 tttgtcgagcagcaagtcctcttgacaactaagctatcttaccagtccttaacaatacta 560
Query: 361 ttatttattaattatcagt 379
|||||||||||||||||||
Sbjct: 561 ttatttattaattatcagt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
