Query= MSMg01no531_f09.b1 MSMg01no531_f09.b1 CHROMAT_FILE:
MSMg01no531_f09.b1 PHD_FILE: MSMg01no531_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:56 2005
(503 letters)
>mm_chr8_125468323_125469227
Length = 905
Score = 866 bits (448), Expect = 0.0
Identities = 458/462 (99%), Gaps = 3/462 (0%)
Strand = Plus / Minus
Query: 44 gtgtttgattctctgtagtatttcagaaaagcagtttgtgaaaaacatcaaaacatgcat 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 gtgtttgattctctgtagtatttcagaaaagcagtttgtgaaaaacatcaaaacatgcat 846
Query: 104 aataatatctgtttatttttcttttatgagtcagggtcttactaggttccctaagctatc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aataatatctgtttatttttcttttatgagtcagggtcttactaggttccctaagctatc 786
Query: 164 ccctat-ccctggttaccagtgatctcctgcctcagccttccgagtagctagaactacag 222
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ccctatcccctggttaccagtgatctcctgcctcagccttccgagtagctagaactacag 726
Query: 223 catgttccattatacttggcttaatgtccgtgtatttacattggagtaggttgtctcacc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 catgttccattatacttggcttaatgtccgtgtatttacattggagtaggttgtctcacc 666
Query: 283 tttactaagttaaaaaacac--tgtttcaggatcttaggttttaaaaaacatgaaggcag 340
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 665 tttactaagttaaaaaacactatgtttcaggatcttaggtttcaaaaaacatgaaggcag 606
Query: 341 tgtttaatgttgtctaatccggagtacagcaccctgtcttcatatgctcggggccatggc 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgtttaatgttgtctaatccggagtacagcaccctgtcttcatatgctcggggccatggc 546
Query: 401 cggcacctttcaatttcttgttacagtttgctgcgcacacgcagtactacctggatcacc 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cggcacctttcaatttcttgttacagtttgctgcgcacacgcagtactacctggatcacc 486
Query: 461 acagttgaaatctcagtgattatgaaaagaaagcattttgtg 502
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 acagttgaaatctcagtgattatgaaaagaaagcattttgtg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 905
Length adjustment: 10
Effective length of query: 493
Effective length of database: 895
Effective search space: 441235
Effective search space used: 441235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_f09.g1 MSMg01no531_f09.g1 CHROMAT_FILE:
MSMg01no531_f09.g1 PHD_FILE: MSMg01no531_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:56 2005
(433 letters)
>mm_chr8_125296928_125297760
Length = 833
Score = 799 bits (413), Expect = 0.0
Identities = 428/433 (98%)
Strand = Plus / Plus
Query: 1 ctcctatgaattcccttgttctgtcttttccactttcccttcccgaaacctcaaatcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcctatgaattcccttgttctgtcttttccactttcccttcccgaaacctcaaatcctg 260
Query: 61 cccaccagacttcccagcagacccagccaatctcttccccctcgatttacacctcggctg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 cccaccagacttcccagcagacccagccaatctcttccccctcgatttccacctcggctg 320
Query: 121 tttgtccagacacacccctcccccttgtttccagcccttctgtggaggatcctgcttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtccagacacacccctcccccttgtttccagcccttctgtggaggatcctgcttagc 380
Query: 181 caccactcttcctagtcctcaggcctttggggaactctctgctagagcatcttggtcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caccactcttcctagtcctcaggcctttggggaactctctgctagagcatcttggtcctt 440
Query: 241 caggacatctgtaactcagctgaggacagtaatgggagtcgtgctggagttctcctcaca 300
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 441 caggacatctgtaactcagctgaggacagtaatgggggtcgtgctggagttttcctcaca 500
Query: 301 tggatatgcctgctttctgcatttgtttttcctggctggttagtccacatctcttctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggatatgcctgctttctgcatttgtttttcctggctggttagtccacatctcttctgtt 560
Query: 361 agtgactatctggataacctcaaatatctggtcattgcagacaacccgtgctgtggtcac 420
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 561 agtgactatctggataacctcaaatatctggtcattccagacaacccatgctgtggtcac 620
Query: 421 tgaaatgtcaatc 433
|||||||||||||
Sbjct: 621 tgaaatgtcaatc 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
