XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTA
CTGTCCGATGAAAAAAATTTTACTCCCTTATGCATTTTCTTAAATCCAAA
TATAAGTGAATATCATAAAATTTAATTACCTTCCATTTCTTATGATTGTA
TCTTTTCAATAGAATTCCTTTGATCTTTAATATGTAACCACCAATACTGT
GATTCTCAGTATTGACATTGCCCTTTTATGGAGTTTTTTGTTTTTTGTTT
TTTTGGTTTTTTTTTTCTGGCATGGGGGTTGGGATATTTTAAGAGAACTT
TCTAAGCACTGATATCTTTGATAATTATAATGTACTTGTAAGAATGGGAC
CAAATAGCCTTGTAGAGGTTAGTGCTTTGATTCACAGCCCAGATTGCATG
AACTTTAACTCGAGGTACATTTCTTAATACACTTTACACATTAGAGATTA
TATTTAATTTTGTTTATATTTGTTATAGAGAATATATTTAAATTTGACAT
CTTCCAAAAGGATAGAAATATATTGTAATATACTGAGTTGTATATATGAG
AATAAACATTGAGTTATGTTAATTATTAATTGTGTTCAATATACATTCAT
TCTTTTGAAATATCTGTACTTTTTAGGGTTCTTGGCCTTGTAAATATTTC
TAATAAACTTTGTGAACTAATGTGAAGAGTTGTTGGCTTATGGGTATCTA
TTTATAGCATATATATGAGTAGAGATTATTATTAAGCATACAATTTA

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCAGACTGATTTCCAGAATGCTTGTAAACACC
TTGCAATCTCACCAGCAATGGAGGAGTGTTCTCTTTTCTCCGCATCCTCA
GTAGCATCTGCTGTTACCTGAGATTTTGATCTTAGCCATTCTGATTGGTG
TGAGGTGAAATCTCAGGATTGCTTTNGATTTTTNNNNCATNTNNTCCCTG
NNATGNNACTAAAAAGGTTTGGTTTTGAAATATTTNTTTTTTAAAAGTTG
CCTTTTTCTTCCCAGTTAAAATTTTTTGGAAAAAATTGGCCCTTCCCAAA
CCCTGGGAAAGAAATTTTTTTTTTTGTGTTTTTTAAAAGCCCTTCCTTGG
AAACCCCAAGTTTTTTTATTTTAAAAAATTTTTTTATTTTTTTTTTTTTA
CCCCCTTTCTCCAAAGGGGTTATTCCCCCCCTTTTTTCCGGGGGGTTTCC
CCCTCCCCCCAAAAAAAACCTTTTTGAAACCCCCCTCCCCCCCCCATTTT
TCCCCCTTTTTTTTTGGAGAAAAAGGGAGGACTCCCCCTTTACTCCCCCT
TTTCAAACATCTTTTTTTTTAATAAAGGGGGTTTTATTTTTGGTTTTTCT
GTGAAAAAAAACACCTTCTCTCTTCTTTTGGAAAGAAAATTTTGTGGAAA
TAATTTTTTGGGAGAGAAAAAAAACCCCCCCCCCTCTCTCACAAAAAAAA
AAGAGGGGGGTGTGGGGAGAAAAAAATTCCTTTTTT

Query= MSMg01no534_j12.b1 MSMg01no534_j12.b1 CHROMAT_FILE:
MSMg01no534_j12.b1 PHD_FILE: MSMg01no534_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:09 2005
         (701 letters)



>mm_chr8_66288454_66289554
          Length = 1101

 Score = 1131 bits (585), Expect = 0.0
 Identities = 603/609 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttactgtccgatgaaaaaaattttactcccttatgcattttcttaaatccaaa 63
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ggaattcttactggcagatgaaaaaaattttactcccttatgcattttcttaaatccaaa 550

                                                                       
Query: 64  tataagtgaatatcataaaatttaattaccttccatttcttatgattgtatcttttcaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tataagtgaatatcataaaatttaattaccttccatttcttatgattgtatcttttcaat 490

                                                                       
Query: 124 agaattcctttgatctttaatatgtaaccaccaatactgtgattctcagtattgacattg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agaattcctttgatctttaatatgtaaccaccaatactgtgattctcagtattgacattg 430

                                                                       
Query: 184 cccttttatggagttttttgttttttgtttttttggttttttttttctggcatgggggtt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cccttttatggagttttttgttttttgtttttttggttttttttttctggcatgggggtt 370

                                                                       
Query: 244 gggatattttaagagaactttctaagcactgatatctttgataattataatgtacttgta 303
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 369 gggatattttaagagaactttctaagcactgatatctttgataattataaagtacttata 310

                                                                       
Query: 304 agaatgggaccaaatagccttgtagaggttagtgctttgattcacagcccagattgcatg 363
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 309 agaatgggaccaaatagccttgtagaggttagtgctttgattcatagcccagattgcatg 250

                                                                       
Query: 364 aactttaactcgaggtacatttcttaatacactttacacattagagattatatttaattt 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aactttaactccaggtacatttcttaatacactttacacattagagattatatttaattt 190

                                                                       
Query: 424 tgtttatatttgttatagagaatatatttaaatttgacatcttccaaaaggatagaaata 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tgtttatatttgttatagagaatatatttaaatttgacatcttccaaaaggatagaaata 130

                                                                       
Query: 484 tattgtaatatactgagttgtatatatgagaataaacattgagttatgttaattattaat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tattgtaatatactgagttgtatatatgagaataaacattgagttatgttaattattaat 70

                                                                       
Query: 544 tgtgttcaatatacattcattcttttgaaatatctgtactttttagggttcttggccttg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  tgtgttcaatatacattcattcttttgaaatatctgtactttttagggttcttggccttg 10

                    
Query: 604 taaatattt 612
           |||||||||
Sbjct: 9   taaatattt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1101
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1091
Effective search space:   753881
Effective search space used:   753881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)