MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-535L04
Chromosome	8 (Build37)
Map Location	35,567,479 - 35,568,064
singlet/doublet	singlet
Overlap gene	LOC666746
Upstream gene	Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159
Downstream gene	Dusp4, LOC675578, Tnks, LOC666792, LOC666797, LOC666804, Ppp1r3b, Thex1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hmgb1-rs17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628431 MGI:104764
definition	gene_synonym : Hmg1-rs17 note : high mobility group box 1, related sequence 17 pseudo : _no_value

name	Tex15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104271 MGI:1934816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp2cb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19053 MGI:1321161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubxd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108159 MGI:1337129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gsr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14782 MGI:95804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2e2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68153 MGI:1915403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbpms (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19663 MGI:1334446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100042769 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Dctn6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22428 MGI:1343154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042777 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042777
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 388 ESTs, 6 Proteins

name	Mboat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234155 MGI:2685017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	Leprotl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68192 MGI:1915442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666694 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Tmem66 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67887 MGI:1915137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619780 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 10 Proteins pseudo : _no_value

name	LOC666718 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG234159 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234159 MGI:3647233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	LOC666746 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins pseudo : _no_value

name	Dusp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319520 MGI:2442191
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675578 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675578
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Tnks (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21951 MGI:1341087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins pseudo : _no_value

name	LOC666797 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC666804 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ppp1r3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244416 MGI:2177268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thex1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67276 MGI:1914526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tex15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118722337 GeneID:104271 MGI:1934816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 15 transcript_id : NM_031374.2

name	Ppp2cb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119672926 GeneID:19053 MGI:1321161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform transcript_id : NM_017374.3

name	Ubxd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861246 GeneID:108159 MGI:1337129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UBX domain containing 6 transcript_id : NM_178648.2

name	Gsr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328488 GeneID:14782 MGI:95804
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione reductase 1 transcript_id : NM_010344.3

name	Gtf2e2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980884 GeneID:68153 MGI:1915403
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor II E, polypeptide 2 (beta subunit) transcript_id : NM_026584.2

name	Rbpms (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185960 GeneID:19663 MGI:1334446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding protein gene with multiple splicing transcript_id : NM_001042674.1

name	Rbpms (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185954 GeneID:19663 MGI:1334446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding protein gene with multiple splicing transcript_id : NM_019733.2

name	Rbpms (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185958 GeneID:19663 MGI:1334446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding protein gene with multiple splicing transcript_id : NM_001042675.1

name	LOC100042769 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258583 GeneID:100042769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042769 transcript_id : XM_001478906.1

name	Dctn6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368025 GeneID:22428 MGI:1343154
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynactin 6 transcript_id : NM_011722.2

name	LOC100042777 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258585 GeneID:100042777
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 388 ESTs, 6 Proteins product : similar to human protein homologous to DROER protein transcript_id : XM_001478939.1

name	Mboat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258534 GeneID:234155 MGI:2685017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : membrane bound O-acyltransferase domain containing 4 transcript_id : XM_001476434.1

name	Leprotl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543118 GeneID:68192 MGI:1915442
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leptin receptor overlapping transcript-like 1 transcript_id : NM_026609.2

name	Tmem66 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982646 GeneID:67887 MGI:1915137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 66 transcript_id : NM_026432.2

name	EG234159 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258536 GeneID:234159 MGI:3647233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : predicted gene, EG234159 transcript_id : XM_146296.7

name	Dusp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364920 GeneID:319520 MGI:2442191
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 4 transcript_id : NM_176933.4

name	LOC675578 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258588 GeneID:675578
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical LOC675578 transcript_id : XM_001479008.1

name	Tnks (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87239973 GeneID:21951 MGI:1341087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase transcript_id : NM_175091.3

name	Ppp1r3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51036623 GeneID:244416 MGI:2177268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 3B transcript_id : NM_177741.3

name	Thex1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541936 GeneID:67276 MGI:1914526
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : three prime histone mRNA exonuclease 1 transcript_id : NM_026067.2

name	Tex15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118722338 CCDS:CCDS22232.1 GeneID:104271 MGI:1934816
definition	codon_start : 1 product : testis expressed gene 15 protein_id : NP_113551.2

name	Ppp2cb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394024 CCDS:CCDS22233.1 GeneID:19053 MGI:1321161
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0000158 - protein phosphatase type 2A activity [Evidence IEA] codon_start : 1 product : protein phosphatase 2a, catalytic subunit, beta isoform protein_id : NP_059070.1

name	Ubxd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861247 CCDS:CCDS22234.1 GeneID:108159 MGI:1337129
definition	codon_start : 1 product : UBX domain containing 6 protein_id : NP_848763.2

name	Gsr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328489 CCDS:CCDS22235.1 GeneID:14782 MGI:95804
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0004362 - glutathione-disulfide reductase activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006749 - glutathione metabolism [Evidence IC] codon_start : 1 exception : mismatches in translation product : glutathione reductase 1 protein_id : NP_034474.3

name	Gtf2e2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980885 CCDS:CCDS22236.1 GeneID:68153 MGI:1915403
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : general transcription factor IIE, polypeptide 2 (beta subunit, 34kD); general transcription factor II E, polypeptide 2 (beta subunit, 34kD) product : general transcription factor II E, polypeptide 2 (beta subunit) protein_id : NP_080860.2

name	Rbpms (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33342267 GeneID:19663 MGI:1334446
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; RNA-binding protein gene with multiple splicing product : RNA binding protein gene with multiple splicing isoform 1 protein_id : NP_062707.1

name	Rbpms (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185961 GeneID:19663 MGI:1334446
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; RNA-binding protein gene with multiple splicing product : RNA binding protein gene with multiple splicing isoform 2 protein_id : NP_001036139.1

name	Rbpms (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185959 GeneID:19663 MGI:1334446
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; RNA-binding protein gene with multiple splicing product : RNA binding protein gene with multiple splicing isoform 3 protein_id : NP_001036140.1

name	LOC100042769 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258584 GeneID:100042769
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478956.1

name	Dctn6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756009 CCDS:CCDS22238.1 GeneID:22428 MGI:1343154
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005869 - dynactin complex [Evidence IDA] [Evidence ISS]; GO:0005739 - mitochondrion [Evidence NAS] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence NAS]; GO:0045502 - dynein binding [Evidence IDA] GO_process : GO:0008610 - lipid biosynthesis [Evidence NAS]; GO:0007005 - mitochondrion organization and biogenesis [Evidence NAS] codon_start : 1 note : p27 dynactin subunit; RGD containing protein product : dynactin 6 protein_id : NP_035852.1

name	LOC100042777 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258586 GeneID:100042777
definition	codon_start : 1 product : similar to human protein homologous to DROER protein protein_id : XP_001478989.1

name	Mboat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258535 GeneID:234155 MGI:2685017
definition	codon_start : 1 product : similar to FKSG89 protein_id : XP_001476484.1

name	Leprotl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386094 CCDS:CCDS22239.1 GeneID:68192 MGI:1915442
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : leptin receptor overlapping transcript-like 1 protein_id : NP_080885.1

name	Tmem66 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982647 CCDS:CCDS22240.1 GeneID:67887 MGI:1915137
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane protein 66 protein_id : NP_080708.2

name	EG234159 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258537 GeneID:234159 MGI:3647233
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_146296.7

name	Dusp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892737 CCDS:CCDS22241.1 GeneID:319520 MGI:2442191
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017017 - MAP kinase phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA] codon_start : 1 product : dual specificity phosphatase 4 protein_id : NP_795907.1

name	LOC675578 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258589 GeneID:675578
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479058.1

name	Tnks (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87239974 CCDS:CCDS22242.1 GeneID:21951 MGI:1341087
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA] GO_process : GO:0006471 - protein amino acid ADP-ribosylation [Evidence IEA] codon_start : 1 product : tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase protein_id : NP_780300.2

name	Ppp1r3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244224 CCDS:CCDS22243.1 GeneID:244416 MGI:2177268
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA] GO_process : GO:0005977 - glycogen metabolism [Evidence TAS] codon_start : 1 product : protein phosphatase 1, regulatory (inhibitor) subunit 3B protein_id : NP_808409.1

name	Thex1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541937 CCDS:CCDS22244.1 GeneID:67276 MGI:1914526
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : histone mRNA 3' end-specific exonuclease protein_id : NP_080343.3

name	LOC666694 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666694
definition	number : 1 pseudo : _no_value

name	LOC666694 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666694
definition	number : 2 pseudo : _no_value

name	LOC666718 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666718
definition	number : 1 pseudo : _no_value

name	LOC666797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666797
definition	number : 2 pseudo : _no_value

name	LOC666797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666797
definition	number : 1 pseudo : _no_value

name	LOC666804 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666804
definition	number : 1 pseudo : _no_value

name	LOC619780 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258587 GeneID:619780
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 10 Proteins product : similar to Fatty acid binding protein 5, epidermal pseudo : _no_value transcript_id : XR_035697.1

name	LOC666746 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258538 GeneID:666746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins product : similar to hCG1777176 pseudo : _no_value transcript_id : XR_032785.1

name	LOC666792 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258590 GeneID:666792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins product : similar to chromodomain helicase DNA binding protein 6 pseudo : _no_value transcript_id : XR_034029.1

clone name	MSMg01-412F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541N21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-535L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-535L04.T7 (MSMg01no535_l04.b1)	MSMg01-535L04.TJ (MSMg01no535_l04.g1)
ACC	AG603086	AG603087
length	777	1,987
length of high quality (start - end)	638 (47 - 684)	---
definition	CHROMAT_FILE: MSMg01no535_l04.b1 PHD_FILE: MSMg01no535_l04.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:13:35 2005	CHROMAT_FILE: MSMg01no535_l04.g1 PHD_FILE: MSMg01no535_l04.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:13:35 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	ACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG GAATTCAGAGCATGTTGATATCACAACTGAATACACTTGACTCCCAGAAG TGCTCTGATAAATCACTGATAAGAAAAAGGCTACAATCTATTTTACTACA CTAAGGGCTTGATAGCATAGAAAGAAAGTGCAGAAGTCTCAAAACTCATA ACAGCCAGTTGCCCTAGATATCACGTCCTACCATAAGGATATTTTGCCAA CGACTCTCTACCTAAGATTCTAAGGGAGCTGAAATTTTCCTATTACCTAG AATCTGATAGCTGTCATATGTCACAGTGCTCAATAAGCACGGCTCATTTT TGTATTGATGCTAGTGTAGACAAGCTTATTGTGTGTCCATAATACAGAAA GTCTAGCCTGGTATCTATAGCACTTTAGAGTGATATTTTTGTTATTAATT TAGACATTTATACTATATATATTTTATCATATTTTAATGTTTTATTTTGA GATGGGTCCTCACCATGCATGTCATCCAGGCTAGCTTTAACCATCCAGGG CTCATGTGAATGCCTTATCTCAGGTTTTTGAGAGGCCAGCTGTAGGCACA CACCATCACATCTGCAGCCACAGGCTTCCTATCCTGTCTTGAGGAGACTG TGCCCTGGAAAACAATGTGCCATATCTCCCAAGTTCAATGTTAACCCACA TGTGCCTATGTATAGGGAAGATCTTGTAGACACACCAGGGAGACAATTTA AACCATGTTCACAATCATGTGATCTAT	TGATGTGTTTACTGCGTCTGTGGCATACGCAAGNGTGAGAACGACAAGAA CAGATGGAGCAGAGTCCGTATCTAACGAGAGAGATGGTCTCACGCGCGTA CCGTGTCGCGCGACGCGTCACGCCGACGTGTGCACATTACTATTCNCTCN ACTCATCCTTATCATACTCTATTACGCTACTGGCCGTATACGCTAGTGTA GCCACACACATATCCTATATCATCNAACCACANCACTATACGACACGCCC CTAGAATCGACTCACCCATCTTCGCGNGCNCNGAGGGCTGTGTCTGTCTG AGCGTCGGATGTGTATGCGGCGTAGTACTACGCCTACTCCTAGATGAGAT CTGACACGCCTAGCACATACTACGTTACTGACGACGACGCGCTCANATGA AGCACTTACGCAACACTTCCTCTCTACTCCTTAATTACTATCACATACAT AGACATNTTACGTAGATCCATATCCNTCTCCACACTAGCTTGAGGCTCTA CGACTCAATATAACACACCNCTTATCCACACACACGCATATCTCTCTACC CNCACCTAACTCAATGTACATNTGTGACAACCATGTAATCTATNGCACGA GATGTCGCGNGAGACGANAGACACATATATAGACTAAATATCNCATACAC TNCTNAAGAACGATACTANGAAGAATATAGATAGAAGCGAGAGANCACTA GCATCTAATATTCGCGAACATAGACTAATAACAACGATATGTAGACATAT TCACACGCGTATAGCGAATCGTAGATATCAGTCGAGAGGATATGAGCTAC ACCGCACGCAGAGATATGAGATATGCGCTACGTCGATATGCAGAACGACT AGTATAGCAGCACGTGCACAAGCACAGTCTNACTGCANTCTAATGGTAGT AGATCTGATCTACCACGCACCGTATGCATCGACGTCGATAATATGATAAC GCACCATATCACACAGTGTGTATACGCATCGCACNTNACCTACGCACATA TGACGCTACCTGTCTCAGNATGACGCGCGTCATATATACGATACAAGAGT ATGCGNACATNGTATACCAGCTCTACATATATAACTATCATACTGACTGT ACACAACACATACGANCACATACTATATAGTCACGTACATAACCGAGCAC ATGTGTACACACGACGATCTACTCTCATCTCTCACGCCACACATAGTAAT GCTACATGATCTTGACACTCTCACTACTACTAAACTGCATCGTCTAGATA GAGCTACGANTCGGCTGCGTGTGCACACNTACTGCTGACAACACACGCNA ACATCACACACTATGATGTCGTCAGTGTCTACTATCATGACGGCACTACC GCGCATGTGTNGATACTATGTGTCGATACGATGATATGAGCGATACGCTG CATAGTGTCTACCACNAGTTTCCACTATNTAGTGCNCATACATTGCACAC TAGCATATAGAGACGACTAACATGTAATGCCGTAGACACACCANCTATAT ATACTCCACTCAACACTAGTCTCGACTGCTATACCTATCCACACTGCCAC GATATNCAGTCNTATCGACATAATAGCACACATACAGAATCAAATCGGCA TGACACAAACGACTACATATGATGTGCTGNGTACATCGCTCTACACCGTA CGCGTAATTATAACTCATACGCATCACACGATGTCGCGTCGTATGCCCTG CTTCATACTGCAGTATGTCGCCGATTCTCCGCTGANANCTGCTGATACTG TGTAGATGTGATCAGATATGAGACTACTAGTATCATCTAGTCAGCATANT ACCGTCAATATGTANTACTATACTCCGTACTCCACATGATACCGCCANGA GCGATAGATGNACGCATGTTCCGCACCATATTCATCATAATGACATCACT NACCAGATCCCTACTCAACCANTGATACTCGACACTCATCTGCTCTCAGT ACTTATCTATCAGAGATCCTANATACTACCACGCTAT
quality values	Open. Hide. 6 6 6 6 6 10 8 8 8 19 19 23 22 18 17 17 32 43 37 37 37 37 33 33 48 48 35 30 30 35 35 36 47 34 34 23 23 32 32 43 59 42 42 34 29 29 36 47 57 57 47 47 42 42 50 41 41 50 50 51 68 68 68 68 68 50 50 50 50 50 50 50 51 51 68 68 50 68 51 51 51 51 57 57 57 57 51 68 68 68 57 57 50 48 47 47 50 51 68 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 68 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 68 68 68 68 62 62 62 62 62 68 68 68 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 68 68 59 59 59 57 57 57 57 57 57 59 59 59 59 68 59 59 68 68 59 59 59 59 59 59 59 59 57 59 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 57 57 59 59 59 59 68 59 59 57 57 57 59 59 68 68 68 68 68 68 59 59 59 59 54 54 54 59 59 57 57 57 57 57 57 43 43 43 59 59 59 59 57 57 57 57 57 57 48 48 44 57 57 57 57 57 46 47 47 47 47 57 57 54 54 48 57 48 48 48 48 48 47 47 47 47 48 57 57 57 54 54 57 57 57 57 48 48 48 48 48 48 46 48 46 59 43 43 43 47 43 43 41 41 41 59 43 48 48 48 48 43 47 46 46 41 32 32 20 19 18 28 28 59 59 47 47 32 34 30 28 25 28 28 32 36 47 39 34 34 28 24 25 34 34 41 41 46 47 47 47 47 43 40 40 47 47 39 46 39 39 36 36 43 36 32 41 41 37 31 28 32 32 34 29 31 39 35 37 39 36 36 28 28 28 34 32 39 35 25 25 19 19 19 26 26 28 30 33 28 31 37 39 32 37 43 43 36 37 39 31 22 28 20 20 20 19 19 23 23 30 34 37 37 27 31 22 19 19 25 19 12 15 14 21 25 16 17 17 28 24 31 31 35 37 41 34 34 25 25 25 28 28 28 28 30 30 30 33 33 35 31 32 30 26 11 13 11 12 12 17 16 12 12 12 18 14 18 18 25 23 22 15 14 14 15 13 9 8 8 10 8 9 9 14 18 27 17 12 11 11 10 22 10 10 10 15 15 16 17 17 10 10 10 12 9 9 9 9 9 9 12 10 10	Open. 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Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no535_l04.b1 MSMg01no535_l04.b1 CHROMAT_FILE:
MSMg01no535_l04.b1 PHD_FILE: MSMg01no535_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:35 2005
         (638 letters)



>mm_chr8_35567479_35568516
          Length = 1038

 Score = 1133 bits (586), Expect = 0.0
 Identities = 586/586 (100%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagagcatgttgatatcacaactgaatacacttgactcccagaagtgctctgat 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ggaattcagagcatgttgatatcacaactgaatacacttgactcccagaagtgctctgat 527

                                                                       
Query: 64  aaatcactgataagaaaaaggctacaatctattttactacactaagggcttgatagcata 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aaatcactgataagaaaaaggctacaatctattttactacactaagggcttgatagcata 467

                                                                       
Query: 124 gaaagaaagtgcagaagtctcaaaactcataacagccagttgccctagatatcacgtcct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaaagaaagtgcagaagtctcaaaactcataacagccagttgccctagatatcacgtcct 407

                                                                       
Query: 184 accataaggatattttgccaacgactctctacctaagattctaagggagctgaaattttc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 accataaggatattttgccaacgactctctacctaagattctaagggagctgaaattttc 347

                                                                       
Query: 244 ctattacctagaatctgatagctgtcatatgtcacagtgctcaataagcacggctcattt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctattacctagaatctgatagctgtcatatgtcacagtgctcaataagcacggctcattt 287

                                                                       
Query: 304 ttgtattgatgctagtgtagacaagcttattgtgtgtccataatacagaaagtctagcct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttgtattgatgctagtgtagacaagcttattgtgtgtccataatacagaaagtctagcct 227

                                                                       
Query: 364 ggtatctatagcactttagagtgatatttttgttattaatttagacatttatactatata 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ggtatctatagcactttagagtgatatttttgttattaatttagacatttatactatata 167

                                                                       
Query: 424 tattttatcatattttaatgttttattttgagatgggtcctcaccatgcatgtcatccag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tattttatcatattttaatgttttattttgagatgggtcctcaccatgcatgtcatccag 107

                                                                       
Query: 484 gctagctttaaccatccagggctcatgtgaatgccttatctcaggtttttgagaggccag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gctagctttaaccatccagggctcatgtgaatgccttatctcaggtttttgagaggccag 47

                                                         
Query: 544 ctgtaggcacacaccatcacatctgcagccacaggcttcctatcct 589
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  ctgtaggcacacaccatcacatctgcagccacaggcttcctatcct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information