Query= MSMg01no535_m01.b1 MSMg01no535_m01.b1 CHROMAT_FILE:
MSMg01no535_m01.b1 PHD_FILE: MSMg01no535_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:39 2005
(666 letters)
>mm_chr8_116992935_116994000
Length = 1066
Score = 1073 bits (555), Expect = 0.0
Identities = 570/575 (99%)
Strand = Plus / Minus
Query: 92 aacaaaagctaagagataaaagacaagttcttaaatcattcccataaaaaaaaataacag 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 aacaaaagctaagagataaaagacaagttcttaaatcattcccataaaaaaaaataacag 1007
Query: 152 ttttcatacaacttgagatttttaaaaaggcctacccacatacacacagcagcttctgat 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 ttttcatacaacttgagatttttaaaaaggcctacccacatacacacagcagcttctgat 947
Query: 212 cacttaagtactgcgtcttgtagaattatgtccatcactcccacgtctatccttagagca 271
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 946 cacttaagtactgcgtcttgtagaattatgtccgtcactcccacgtctatccttagagca 887
Query: 272 gtggttctcaaccttcctaatgcaggctagcagatatgcgacccctgtgaaagggggtca 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 gtggttctcaaccttcctaatgcaggctagcagatatgcgacccctgtgaaagggggtca 827
Query: 332 tttggccccctagggggtcgtgacccatactttgagaaccactgccttagagtatcttaa 391
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 826 tttggccccctagggggtcgtgacccacactttgagaaccactgccttagagtatcttaa 767
Query: 392 gtttatctctgtccctagtagctatcagaattaatgtatataaatctctcctaccaaccc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gtttatctctgtccctagtagctatcagaattaatgtatataaatctctcctaccaaccc 707
Query: 452 actagtcactcactctccctttaatggtgtgctcagaacagaaacttcagcaagctttca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 actagtcactcactctccctttaatggtgtgctcagaacagaaacttcagcaagctttca 647
Query: 512 gcttatccgtgcttcatccagaaaggaacagactagtctagatcagtggttcttgatttg 571
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 646 gcttatccgtgcttcatccagaaaggaacagactagtctagatcagtggttcttgacttg 587
Query: 572 taagttgcgaccctaagaccatcgggaaaacaagtatttacaattcataacaattgcaaa 631
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 586 taagttgcgaccctaagaccatcgggaaaacaaatatttacaattcataacaattgcaaa 527
Query: 632 actccatttatgaagtaccaatgaaaataacttca 666
|||||| ||||||||||||||||||||||||||||
Sbjct: 526 actccagttatgaagtaccaatgaaaataacttca 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_m01.g1 MSMg01no535_m01.g1 CHROMAT_FILE:
MSMg01no535_m01.g1 PHD_FILE: MSMg01no535_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:40 2005
(634 letters)
>mm_chr8_116838750_116839782
Length = 1033
Score = 1172 bits (606), Expect = 0.0
Identities = 627/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 1 gtctcagaaccgtcttcctggaaagccagagccaggagcatttgtcattaaatgtcactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctcagaaccgtcttcctggaaagccagagccaggagcatttgtcattaaatgtcactc 260
Query: 61 cccaggtgcttgactccagtctctggggagacttaggaatgcttctcagaattgtcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaggtgcttgactccagtctctggggagacttaggaatgcttctcagaattgtcttct 320
Query: 121 tgagaaaccagagcaaggaatattggtcattaaatgccactcccccgagtccaaggtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagaaaccagagcaaggaatattggtcattaaatgccactcccccgagtccaaggtgac 380
Query: 181 ctcacaggcaggaactctccgtctttctggacaaattctatgtagaacaaatcccaacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcacaggcaggaactctccgtctttctggacaaattctatgtagaacaaatcccaacag 440
Query: 241 cagtagttgcacaaagactcgaatataatggggttgacgttggattttctttagcagaat 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtagttgcacaaagactggaatataatggggttgacgttggattttctttagcagaat 500
Query: 301 gcaatgcagaaaccagtgaagacgattgcacctagtgggaggtagcagcaaagactccga 360
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 501 gcaatgcagaaaccagtgaagacgattgcaactagtgggaggtagcagcaaagactccaa 560
Query: 361 agtaaaaaaaaatacacatagtggtgtgctggtcactgttgtagctatgtgcccttagag 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtaaaaaaaa-tacacatagtggtgtgctggtcactgttgtagctatgtgcccttagag 619
Query: 421 aagaaagtcgtgtttgccaatgtcagtggtgtaaatgcactcaccactatgtcgttgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 620 aagaaagtcgtgtttgccaatgtcagtggtgtaaatgcactcaccaccatgtcgttgaaa 679
Query: 481 acacaagtctgtggaaatgtaaatcatcactcccgggctcatagttgatacatagtccct 540
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 680 acacaagtctgtggaaatgtaaatcatcactctcaggctcatagttgatacatagtccct 739
Query: 541 aaaccctgattccatagggttgactgagaatttgatccctttagtggtggattggaccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaaccctgattccatagggttgactgagaatttgatccctttagtggtggattggaccag 799
Query: 601 cctacagctcgctttcactagtcttgtctgcaga 634
||||||||||||||||||||||||||||||||||
Sbjct: 800 cctacagctcgctttcactagtcttgtctgcaga 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1033
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1023
Effective search space: 638352
Effective search space used: 638352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
