NTGTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTGTTATTATTTATTATTACATTGTTCCATATGTTCATAC
CAGTGAAAATTTTTAGATACCATGTTTTGCTGTCATGAAGTCACTACCTA
ATGACAAAGAGAATACAGAATAGCCCAAACTGGACCTATCATGATCTTTT
AACATTAAATGCATATACTTTCAAAATATGTTACATGAAAGAACATTTAG
AAGTGAGAAAATCCTGTAGGAGTTAGAGATTTAGCATAAAATAAAGTTTC
TACTTTCAGGAAGCTAAAACTCTAGATTGCGTTGATCAGGAGCAATGTGT
GTGTTTTGTTTTCTTCTGTATCCAGTAATATAAAAATACTCTGTGTGATA
AATAAAAAAATGCCAACTAACCTAATATAATTTTGATAATGATGATAATT
TCAAACTCTACCATGATAATACATGCATACAATGCTCTCACCTGTGGAGA
GGAAGTAGGAAGATCAGGAGTTCAAATCCATCCTCAGCAATATCTAATGA
TGGAGGCCATGGTGAGCTGCATACCATGCTGTCACAAGTATAAGAATAAA
CGCATGAAACTCAAGAAGAACAAAGACCAAAGTGTGGACACTTTGCCCCT
TCTTAGAAATGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAAT
TTGGAGCTGTAACGAAAGGATGGACCATCTAGTGATTGCCC

NTTTTTGCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTTATTAATTTGTGTTTC
AGAGTGACTGTGGCCTCATAAAACTAATTAGGCAATGGTCCTTATGTATC
TCTTTTTTGGAATAATTTAAGGAGTATTGGTATTAGCTCTGTTTTGAAAG
TCTGGTAGAATTCTGTGCTAAAACTGCCTAGACCATGGCTGCTTTTGAGT
AGAACATTTTTAATGACTGCATATCCTTAGGAGTTATAGGCTTTTATATC
ATTTATTTGATCTTCATTTAACTTTGATAAGTGGTAATTATTGAGAAAAA
ATATTATTCCTTTTAGATTTTCCAATTTGGTCAAGTGCATGTATTTAAAT
TTTGACCTAATGATTCTTTAGATTTCTTCTATGTTCCTATTACTATGTCC
CCCTTTCAGTTTCTGATTTGTGTCGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGCATGTGTGTATGTTGTAGTAAGCTTGGATAAGG
TTTCATTTACCTTATTGTTTTTTTTTCAACTAACTCTTTTGTTTCATTAA
TTCTTTGTATTCTTCTCATTGTTTCTACTTTATTAATTTAAGCCCTTAGT
TGGGTTATTTCCTGCTATCTACCTAATTTGGGTGTGCTTACTTCTTTTTG
TTCTAGTACTTCCAAGTGTCCTGCTAANGTGTTAGTATG

Query= MSMg01no537_h16.b1 MSMg01no537_h16.b1 CHROMAT_FILE:
MSMg01no537_h16.b1 PHD_FILE: MSMg01no537_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:51 2005
         (683 letters)



>mm_chr8_103934388_103935471
          Length = 1084

 Score = 1183 bits (612), Expect = 0.0
 Identities = 660/676 (97%), Gaps = 1/676 (0%)
 Strand = Plus / Minus

                                                                       
Query: 9   tctgttattatttattattacattgttccatatgttcataccagtgaaaatttttagata 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tctgttattatttattattacattgttccatatgttcataccagtgaaaatttttagata 687

                                                                       
Query: 69  ccatgttttgctgtcatgaagtcactacctaatgacaaagagaatacagaatagcccaaa 128
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 acatgttttgctgtcatgaagtcactacctaatgacaaagagaatacagaatagcccaaa 627

                                                                       
Query: 129 ctggacctatcatgatcttttaacattaaatgcatatactttcaaaatatgttacatgaa 188
           ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 626 ctggacctatcatgatcttttaacattaaatgcatatactttcaacatatattacatgaa 567

                                                                       
Query: 189 agaacatttagaagtgagaaaatcctgtaggagttagagatttagcataaaataaagttt 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agaacatttagaagtgagaaaatcctgtaggagttagagatttagcataaaataaagttt 507

                                                                       
Query: 249 ctactttcaggaagctaaaactctagattgcgttgatcaggagcaatgtgtgtgttttgt 308
           |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 506 ctactttcaggaagctaaaactctagatagcgttgatcagtagcaatgtgtgtgttttgt 447

                                                                       
Query: 309 tttcttctgtatccagtaatataaaaatactctgtgtgataaataaaaaaatgccaacta 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 446 tttcttctgtatccagtaatataaaaatactctgtgtgataaataaaaaaatgccaactg 387

                                                                       
Query: 369 acctaatataattttgataatgatgataatttcaaactctaccatgataatacatgcata 428
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcctaatataattttgataatgatgataatttcaaactctaccatgataatacatgcata 327

                                                                       
Query: 429 caatgctctcacctgtggagaggaagtaggaagatcaggagttcaaatccatcctcagca 488
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caatgctctcatctgtggagaggaagtaggaagatcaggagttcaaatccatcctcagca 267

                                                                       
Query: 489 atatctaatgatggaggccatggtgagctgcataccatgctgtca-caagtataagaata 547
           ||||| | |||||||||||||||||||||||||||||||||||||  |||||| ||||||
Sbjct: 266 atatcgagtgatggaggccatggtgagctgcataccatgctgtcaggaagtatgagaata 207

                                                                       
Query: 548 aacgcatgaaactcaagaagaacaaagaccaaagtgtggacactttgccccttcttagaa 607
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 206 aacgcatgaaactcaagaagaacgaagaccaaagtgtggacactttgccccttctgagaa 147

                                                                       
Query: 608 atgggaacaaaacacccatggaaggagttacagagacaaaatttggagctgtaacgaaag 667
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgggaacaaaacacccatggaaggagttacagagacaaaatttggagctgtaacgaaag 87

                           
Query: 668 gatggaccatctagtg 683
           |||| |||||||||||
Sbjct: 86  gatgaaccatctagtg 71


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space:   722802
Effective search space used:   722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)