NAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCTATACCTGGAGTACAGTGTTCAACTGTGGCTGTTTAAACA
CACACAATCCTCTTCTATCAACTCTGACTTTTGCTGATAATGGGTTTCAC
CAGGAACACTGTGGCTGATGGACTCAGAGACTGAAGTGGATTCTCCCTCC
AACTGCTCTCTTCTGAAGCCTTAGGCTGTGAAACAGCTGGCTGTCACATT
GATAGTGGCTGCATTACCCAGGCTGAGAATAAGAGCTTCTGGGCTCAGTC
CCAAGTCTTCATAATGTGCTGTCATACCAGTCACAGGCCAGTGAGCTCAG
AAGTCTGTATAAGCTCAAATGCCAGAGAGCCAGCATCTTCACAGGTCATC
CATTTGGATAGGGACCAAAGCTTCCCAGCCTGCCCTATCACCGAAGCTAT
ATGTCAATTCCCTCAGAGACCAGAATCCATGCTTCCTCACAGATGTCAGC
TGGAACCATGGAAATCATGTCATGATGAAAAGGTCATGAAGTCATGAGGG
CCTGCCATAGACTTTTGTCTTCGTGCCACATGAAGACTATAGAATTCAAA
GAGAACAAATCAAACCACCTCTACTAACAGCATGGCATAATAGTATTTAC
AGAGCACTCACTACAACTGAGCCCCACAATGTTCCACATGCACTATTGAT
TATAAGTTTTTCTGTACTCATTAGAGGGGATATCTATGAAGAAATTG

NCCCGCAGCATAAAAAGGAAGGCTGGTGGCGCTGGGCGTTCCCTTTAGGT
GAACTATATAAAGATTTTCGCGAAATCTCCACCATTCATTCAATTGCGTG
GCGTTCTTTTCCTTTCATATACACCTGTTGACCCCTTTTTTGTGCTTTTT
ACTTCCCGCGATCTTCGAAAATTTGTTTCAAGCGGGATTATTTGTAGGGT
TACACCCACTCTTCTTACATAGCGGATTAACTTTTTTATTTTATAAAATG
GGCCTTTGCAATTTGCGGTACCACATCCCAGCAAAAAAGTCTCAAAGGGC
TTTTTTAGGATATCAAAATTTACACAAAACCCCCGCAGGTGGTTTATATT
AATTGTGAAAAAATTACTAAGCGTTTTCTCCCGCATAAGCGTGCTAAGCC
CTAAAAATTGAAACCCCTCCCTCCTAGAATAACTTTTTATTAAAATACAA
AAGACCTCCCCTCTCCGCCCATAGCAGTGGAGGGATTTTAAATATTTCCC
CCCCCTGTGTGCACAACATGACCACATTCCTAGCCTTATTTTTAGCCCTC
AGAAAGAACACACGCTAGACTCTCTTCTAGTCCTGATGTAGATAGATCAG
TATGGTGGGTTGTTGGTAAAAATCTTCTCAGTATTATTGGTCTTTTTGTC
TGGGTGTCATGTGGGGAGAAAAATGATATTATCTTCTCTCATGGAATATA
AATAATACACTACCTCCAGAAAGNNTTAGNNAACATACTGCGNNNCGAGA
TCTCGCTAATATTATCTAATAAATNNNNNNNNNNGGGTGGGNNNCTCCTC
CCGNGNCCGTTTCCCCTCTCTCTTTACTATAGCGTAGTAGTAGATATCCA
CTCG

Query= MSMg01no542_p12.b1 MSMg01no542_p12.b1 CHROMAT_FILE:
MSMg01no542_p12.b1 PHD_FILE: MSMg01no542_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:10 2005
         (694 letters)



>mm_chr8_77304729_77305822
          Length = 1094

 Score = 1330 bits (688), Expect = 0.0
 Identities = 688/688 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctatacctggagtacagtgttcaactgtggctgtttaaacacacacaatcct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctatacctggagtacagtgttcaactgtggctgtttaaacacacacaatcct 263

                                                                       
Query: 64  cttctatcaactctgacttttgctgataatgggtttcaccaggaacactgtggctgatgg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttctatcaactctgacttttgctgataatgggtttcaccaggaacactgtggctgatgg 323

                                                                       
Query: 124 actcagagactgaagtggattctccctccaactgctctcttctgaagccttaggctgtga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actcagagactgaagtggattctccctccaactgctctcttctgaagccttaggctgtga 383

                                                                       
Query: 184 aacagctggctgtcacattgatagtggctgcattacccaggctgagaataagagcttctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacagctggctgtcacattgatagtggctgcattacccaggctgagaataagagcttctg 443

                                                                       
Query: 244 ggctcagtcccaagtcttcataatgtgctgtcataccagtcacaggccagtgagctcaga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggctcagtcccaagtcttcataatgtgctgtcataccagtcacaggccagtgagctcaga 503

                                                                       
Query: 304 agtctgtataagctcaaatgccagagagccagcatcttcacaggtcatccatttggatag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtctgtataagctcaaatgccagagagccagcatcttcacaggtcatccatttggatag 563

                                                                       
Query: 364 ggaccaaagcttcccagcctgccctatcaccgaagctatatgtcaattccctcagagacc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggaccaaagcttcccagcctgccctatcaccgaagctatatgtcaattccctcagagacc 623

                                                                       
Query: 424 agaatccatgcttcctcacagatgtcagctggaaccatggaaatcatgtcatgatgaaaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agaatccatgcttcctcacagatgtcagctggaaccatggaaatcatgtcatgatgaaaa 683

                                                                       
Query: 484 ggtcatgaagtcatgagggcctgccatagacttttgtcttcgtgccacatgaagactata 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggtcatgaagtcatgagggcctgccatagacttttgtcttcgtgccacatgaagactata 743

                                                                       
Query: 544 gaattcaaagagaacaaatcaaaccacctctactaacagcatggcataatagtatttaca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaattcaaagagaacaaatcaaaccacctctactaacagcatggcataatagtatttaca 803

                                                                       
Query: 604 gagcactcactacaactgagccccacaatgttccacatgcactattgattataagttttt 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gagcactcactacaactgagccccacaatgttccacatgcactattgattataagttttt 863

                                       
Query: 664 ctgtactcattagaggggatatctatga 691
           ||||||||||||||||||||||||||||
Sbjct: 864 ctgtactcattagaggggatatctatga 891


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space:   741456
Effective search space used:   741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)