Query= MSMg01no543_e14.b1 MSMg01no543_e14.b1 CHROMAT_FILE:
MSMg01no543_e14.b1 PHD_FILE: MSMg01no543_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:36 2005
(106 letters)
>mm_chr8_75944627_75945132
Length = 506
Score = 205 bits (106), Expect = 6e-58
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 1 aggaacagggaaaaaggaaaccctcccaatcagcagctaagattccttctggtggctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aggaacagggaaaaaggaaaccctcccaatcagcagctaagattccttctggtggctcca 247
Query: 61 gccaacatggtaggccctagcaaacacaagatcttgggatcactga 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gccaacatggtaggccctagcaaacacaagatcttgggatcactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 506
Length adjustment: 8
Effective length of query: 98
Effective length of database: 498
Effective search space: 48804
Effective search space used: 48804
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no543_e14.g1 MSMg01no543_e14.g1 CHROMAT_FILE:
MSMg01no543_e14.g1 PHD_FILE: MSMg01no543_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:36 2005
(319 letters)
>mm_chr8_75753652_75754368
Length = 717
Score = 578 bits (299), Expect = e-169
Identities = 314/319 (98%), Gaps = 2/319 (0%)
Strand = Plus / Plus
Query: 1 tatctgagcattgtattccttccagatcttttaccccctttatctgcttaattagcattg 60
|||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 201 tatctgagcattgtattccttccagatc-tttacctgctttatctgcttaattagcattg 259
Query: 61 ccctctgggtctcacccagctcaattgcctcaccatgcaggaaacctttcagtaccatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccctctgggtctcacccagctcaattgcctcaccatgcaggaaacctttcagtaccatag 319
Query: 121 ccacctacagcacaacttgactttttctggagggttatccatttgtcatctggttttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccacctacagcacaacttgactttttctggagggttatccatttgtcatctggttttgtt 379
Query: 181 tctatgtggtgaactccagcagaagaggagagacgctgccttccagtcagatgaataaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctatgtggtgaactccagcagaagaggagagacgctgccttccagtcagatgaataaaa 439
Query: 241 aacacattttagtttccaaagaaaagaaactacttgtatctttctgctagatttgaaaca 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 440 aacacattttagtttccaaagaaaagaaactacttgtatctt-ctgctagattcgaaaca 498
Query: 301 ggaattatggaaaaatctt 319
|||||||||||||||||||
Sbjct: 499 ggaattatggaaaaatctt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 717
Length adjustment: 9
Effective length of query: 310
Effective length of database: 708
Effective search space: 219480
Effective search space used: 219480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
