Query= MSMg01no544_i21.b1 MSMg01no544_i21.b1 CHROMAT_FILE:
MSMg01no544_i21.b1 PHD_FILE: MSMg01no544_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:15 2005
(663 letters)
>mm_chr8_103389740_103390802
Length = 1063
Score = 1191 bits (616), Expect = 0.0
Identities = 652/670 (97%), Gaps = 10/670 (1%)
Strand = Plus / Plus
Query: 4 ggaattccaaccctgctgctatatcctctgtcagtggaaacctttgcctcgattccaaac 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 194 ggaattccaaccctgctgctatatcctctgtcagtggaaacctttgccttgattctaaac 253
Query: 64 tgcatatttttccattttcagaataaagttgttatgtggattaatatagcctagaataga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgcatatttttccattttcagaataaagttgttatgtggattaatatagcctagaataga 313
Query: 124 gtagctgatcaataactattagacaatccactcttttcttgaatatggttaaactgaatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gtagctgatcaataactattagacaatccactcttttcttgaatatggttaaactgaatg 373
Query: 184 aataaaccaagaatatatttaattacccctttttgttactaatacattccacacatattt 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aatagaccaagaatatatttaattacccctttttgttactaatacattccacacatattt 433
Query: 244 attttccaactctttatatctataaatctatgtgtctttctaaaatctatctaagtatcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 attttccaactctttatatctataaatctatgtgtctttctaaaatctatctaagtatcc 493
Query: 304 atctgcccatggacctaaaatattaccttcatacttaaaatatctaaaatttatgggcac 363
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atctgcccatgtacctaaaatattaccttcatacttaaaatatctaaaatttatgggcac 553
Query: 364 atcataagtaaatttaactatctattcccaaacatagacacacactgtgtatgtataggc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atcataagtaaatttaactatctattcccaaacatagacacacactgtgtatgtataggc 613
Query: 424 ataggtatatgtttatgatgtatgtatgcatgtgtgtgtgtgtgtatatatatatatata 483
||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 614 ataggtatatgtttatgatgtatgtatgcatgtgtgtgtatatatatatatatatatata 673
Query: 484 tata----------atctatgtaatacatattatatactatatatttattaaatgatgta 533
|||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tatatatatatataatctatgtaatacatattatatactatatatttattaaatgatgta 733
Query: 534 cataaatatgttcacagtctgttttcatacacttacatatgttattgcagtggtattgac 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tataaatatgttcacagtctgttttcatacacttacatatgttattgcagtggtattgac 793
Query: 594 attagataaaataatttcaagaattgtcttcctgacccttttgtgtattttcttactttt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 attagataaaataatttcaagaattgtcttcctgacccttttgtgtattttcttactttt 853
Query: 654 tagtttttgt 663
||||||||||
Sbjct: 854 tagtttttgt 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_i21.g1 MSMg01no544_i21.g1 CHROMAT_FILE:
MSMg01no544_i21.g1 PHD_FILE: MSMg01no544_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:15 2005
(658 letters)
>mm_chr8_103427277_103428330
Length = 1054
Score = 1176 bits (608), Expect = 0.0
Identities = 644/658 (97%), Gaps = 4/658 (0%)
Strand = Plus / Minus
Query: 1 aacagcagtttaatttcagttttctttgaagaattagtttttctgtaaaattgaagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 854 aacagcagtttaatttcagttttctttgaagaattagtttttctgtataattgaagcaca 795
Query: 61 aaaatttttatctggtttatgaagtgatatttgattgcatagtataattttcatatgtga 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 aaattttttatctggtttatgaagtgatatttgattgcatagtataattttcatatgtga 735
Query: 121 gagtaaaacaacaaaatttgcatcttatataaataatgggttcatttgctaaccttagaa 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 734 gagtaaaacaacaaaatttgcatcttatataaataatgagttcatttgctaaccttagaa 675
Query: 181 aagtgatgtgtttatttcataggatttccttatcaacaattaaatatgaacatataaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aagtgatgtgtttatttcataggatttccttatcaacaattaaatatgaacatataaata 615
Query: 241 gatttgatttactagttgtaaaaagatggggagcagatttcacaatggattaaagaacac 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 614 gatttgatttactagttgtaaaaagatggggatcagatttcacaatggattaaggaacac 555
Query: 301 atgattctttaaaggaaattatattacgtagttacaggaaaatgggataaacctatttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atgattctttaaaggaaattatattacgtagttacaggaaaatgggataaacctatttaa 495
Query: 361 aagattcatgtgtatacaatgatagatggcagacctgttgactctcagatttccaacttt 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 494 aagattcatgtgtatacaatgatagatggcagacctgttgtctctcagatttccatcttt 435
Query: 421 gtttggctccaactgggctgaaatattttacacggcacatgcataacactttaaggcaca 480
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 434 gcttggctccaactgggctgaaatattttacacggcacatgcataacaccttaaggcaca 375
Query: 481 tagttccaccacaaagatagtactcttcataaattgcttcaattccaaaaactgtggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tagttccaccacaaagatagtactcttcataaattgcttcaattccaaaaactgtggttt 315
Query: 541 tagaggttctccccatgcctaattgactctaaatatttctgaagaaaaaagcagattatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 tagaggttctccccatgcctaattgactctaaatatttctgaagaaaaaagcagactatt 255
Query: 601 tatttttctttcatttatatggggaattatctctagacagtcctgtttatgactgtaa 658
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 t----ttctttcatttatatggggaattatctctagacagtcctgtttatgactgtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1054
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1044
Effective search space: 676512
Effective search space used: 676512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
