NATGATTCTAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTGTTCATTTCTGAGCCCCATTTTTTAATGGGGTTAT
TTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATT
AGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGG
TGGTCTTTTTGTCTTATTGACAGTGTCTTTTGCCTTGCAGAAACTTTGGA
GTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATT
GCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTT
CCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGAT
CCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCG
ATTCGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTT
GAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGA
TCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTC
CATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCAC
AATTGCTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAG
TTCTTTTATCCTTGAGAAGACTTTTTGCTATCCT

TGGGGTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGCTTCCCCACGGAGGATAA
AGCTCTGCCTTCCCCCTCCCTCCCCTCTGCAATCTTTCTTTGTGATGGGC
GTTAGAGAGCCCAGCCGCCTCTGTTCTGCACTGCACCGCTCCAAGAGCAA
ATTTATTTATATATTAATTTTATATAAAAAAGATTTCTCATAGGGAGCCA
GAGATTGAATCACAGGCAGAAACCTGATTTGAGGTTGGAGGCAGGATGGC
AGCAAGCAAAGTCAAAGAACAGAGGCTCTGAGGCTAGGAAGTAGGCAGGG
GTTAGAATTGGCTTCCAGAAAGCTCCCCAGCACCTGGTCTGCCCTCTTGG
CACAGGGGCCCACGTGCAGTGCACAGCCCGAGTGTTCTTTTTCCGTGGTT
ATGTAACTGACAAATGACCACAAACGCAGTGATTTAAAACTACCTGTTTC
TTATCTCCTAGCCTCGGTAGGTGTCGGGGGCTCTGCTCTGCTGGCTTTTC
AGCTCAGGGTCTCCCAGCTGAGATCAAGGTGTGGGATAGGTTGTGTTCTC
ATTTGCAGGATCAACTTGGGGACCCATCCATTTCAAACTTCCCCCAGGGT
GTCTACAGAATTCATTTCCGTTCAGCATTATGGTTTGTGGCAGCTTGTTG
TTCTTTTATTTTTTTAAAGCAAGAAATGAAGAGGAAGATACA

Query= MSMg01no544_p20.g1 MSMg01no544_p20.g1 CHROMAT_FILE:
MSMg01no544_p20.g1 PHD_FILE: MSMg01no544_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:50 2005
         (661 letters)



>mm_chr8_110580095_110581155
          Length = 1061

 Score = 1255 bits (649), Expect = 0.0
 Identities = 659/663 (99%), Gaps = 2/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgcttccccacggaggataaagctctgccttccccctccctcccctctgcaatctttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcttccccacggaggataaagctctgccttccccctccctcccctctgcaatctttc 260

                                                                       
Query: 61  tttgtgatgggcgttagagagcccagccgcctctgttctgcactgcaccgctccaagagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtgatgggcgttagagagcccagccgcctctgttctgcactgcaccgctccaagagc 320

                                                                       
Query: 121 aaatttatttatatattaattttatataaaaaagatttctcatagggagccagagattga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatttatttatatattaattttatataaaaaagatttctcatagggagccagagattga 380

                                                                       
Query: 181 atcacaggcagaaacctgatttgaggttggaggcaggatggcagcaagcaaagtcaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcacaggcagaaacctgatttgaggttggaggcaggatggcagcaagcaaagtcaaaga 440

                                                                       
Query: 241 acagaggctctgaggctaggaagtaggcaggggttagaattggcttccagaaagctcccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagaggctctgaggctaggaagtaggcaggggttagaattggcttccagaaagctcccc 500

                                                                       
Query: 301 agcacctggtctgccctcttggcacaggggcccacgtgcagtgcacagcccgagtgttct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcacctggtctgccctcttggcacaggggcccacgtgcagtgcacagcccgagtgttct 560

                                                                       
Query: 361 ttttccgtggttatgtaactgacaaatgaccacaaacgcagtgatttaaaac--tacctg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 561 ttttccgtggttatgtaactgacaaatgaccacaaacgcagtgatttaaaacaatacctg 620

                                                                       
Query: 419 tttcttatctcctagcctcggtaggtgtcgggggctctgctctgctggcttttcagctca 478
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 tttcttatctcctagcctcggtaggtgttgggggctctgctctgctggcttttcagctca 680

                                                                       
Query: 479 gggtctcccagctgagatcaaggtgtgggataggttgtgttctcatttgcaggatcaact 538
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 gggtctcccagctgagatcaaggtgtgggataggatgtgttctcatttgcaggatcaact 740

                                                                       
Query: 539 tggggacccatccatttcaaacttcccccagggtgtctacagaattcatttccgttcagc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggggacccatccatttcaaacttcccccagggtgtctacagaattcatttccgttcagc 800

                                                                       
Query: 599 attatggtttgtggcagcttgttgttcttttatttttttaaagcaagaaatgaagaggaa 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 attatggtttgtggcagcttgttgttcttttatttttttaaagcaagaaatgaagaggaa 860

              
Query: 659 gat 661
           |||
Sbjct: 861 gat 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)