BAC Information

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BAC

Clone NameB6Ng01-007L02
Chromosome9 (Build37)
Map Location 92,838,711 - 92,839,833
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009
Downstream geneLOC100040114, LOC674371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007L02.bB6Ng01-007L02.g
ACCDH844184DH844185
length1,1151,079
definitionDH844184|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L02, 5' end.DH844185|Mus musculus domesticus DNA, BAC clone: B6Ng01-007L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttccaaaggtaaagggaattcttggcaaatcttctgtttctta
ttgaattatgacaagttgagaaacgaatatttatggagaatagtctgtaa
gatctgttagcagaatcaggcaagatttcaaattttgagtagaaactcag
actaaataatatcacaagacctcagcagggaacaaaagaaaaagccaccc
ttagtgtgggacactgcatcttcctgtcagctgtgtagaggaaaaaatat
ggcagtggttctccattggaatggcaattttaagagaaacaattagttat
gcaaatattagttcaatatagaaaatgagatttgtggctttaaaattcca
tttgccacttcaattacaaataaagatttacccttctattcattttctta
cttttaattccatcttcattttttcttcaactttattagttgtcttagat
tgtttatatcatgcttatttctttcccccaaatcacagaataattttaaa
acaattattctgcttttctatcttatatcttgaccagagtcttccctccc
tctactcctcctagtccactctccatacacttctctgttttcttcaaata
agagtagttccttccagggatattaatcacacacagcataacaggttgta
ataagacacaggcacaaaccctgtatcaggctggaagaggtaaccaggac
tcaattgttaactcatgatattttcactctccttctgtcttttcttttct
gaacatgtagccttaaacatgctgagtatagatgctatcactgacctatg
cccctaggactttaaaaacatacattttgtaaacatctggaatgagattt
tgatttaaaaaaaaaggagattgtggagattaagtataagtgaaagatat
ttctagtcagttaatatataccttaatatggatgcaagtaagtatttctt
atttttaaagtgtatttccccatagaagtgatcttctggtcaaattagat
gaattatatgtagaaaaaacgcaaggttcaaaattgttagcaagctttcc
tgtttaggaccacatagtctggcattgaagggctatgagtatacacactt
caaccaggtcgaagt
gaattctcagctcctctagtgccatgcctgcctggatgctgccatgcttc
aggccatgatgattgtgggcctgggtacccgaggttttccatggagatct
ctgtccaggcctggtacaagggttccagtgaagggaagtaagtgcaggct
gggaggcgaaatctctgccctgccttctaggtcagtaactccaagccgct
ctgagctgagttgggtcggactgggccgacaggaagcctactatccagtg
aggagtgtgtcgagacctcaggtggctcttcgggagagaagatctcttcc
caagtgttacatacagctcctggaacaaaagactcagacgaaggagtagt
cctcctgtacctttagttccctggatggatttatatacagttctgggggt
gactcagggatcgacagcaggtacctttcattggcttggattgagagttt
gaggaaaatctaatttgcatgtaggaaggcttggtgctgtttctatgtga
ctgatagccatgcacctctcctgtaggggctgtgggggcagtaacttcaa
taggagccaggggtccaggagacatgatcgaatgccttcagtcccatgta
gttggaaattccacccactgggtcccaccagagttcaacacctaagctcc
actggagacctggctgtctgtgcgtagctagttgccccatagatgataat
ggactgaatctcagaaccagtaagccaatctcaattaaatgtcctttatg
tgtgttgttcttttcacagcaataaaaccctaactaacacagaagttggt
accatggactgggatattgctgtgatcgacctgactatgttttagtttgg
aggaatgtggacttggggactttgggtttgggaaagtgatggaatgcttt
tagtgaggcttaatgagctatcctagtaggattatggagggcattggtgc
tgaggggaattgaactgtacgacctggcccaagatagtctcgggaaaaga
tgttatatgttgttaccacacacagccagtttccaaaatgcgaaagatag
gaaaatccctatcgtatatcttggcatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_92838711_92839833
seq2: B6Ng01-007L02.b_41_1155

seq1  GAATTCTTTCCAAAGGTAAAGGGAATTCTTGGCAAATCTTCTGTTTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAAAGGTAAAGGGAATTCTTGGCAAATCTTCTGTTTCTTA  50

seq1  TTGAATTATGACAAGTTGAGAAACGAATATTTATGGAGAATAGTCTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTATGACAAGTTGAGAAACGAATATTTATGGAGAATAGTCTGTAA  100

seq1  GATCTGTTAGCAGAATCAGGCAAGATTTCAAATTTTGAGTAGAAACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTTAGCAGAATCAGGCAAGATTTCAAATTTTGAGTAGAAACTCAG  150

seq1  ACTAAATAATATCACAAGACCTCAGCAGGGAACAAAAGAAAAAGCCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATAATATCACAAGACCTCAGCAGGGAACAAAAGAAAAAGCCACCC  200

seq1  TTAGTGTGGGACACTGCATCTTCCTGTCAGCTGTGTAGAGGAAAAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGGGACACTGCATCTTCCTGTCAGCTGTGTAGAGGAAAAAATAT  250

seq1  GGCAGTGGTTCTCCATTGGAATGGCAATTTTAAGAGAAACAATTAGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGGTTCTCCATTGGAATGGCAATTTTAAGAGAAACAATTAGTTAT  300

seq1  GCAAATATTAGTTCAATATAGAAAATGAGATTTGTGGCTTTAAAATTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATATTAGTTCAATATAGAAAATGAGATTTGTGGCTTTAAAATTCCA  350

seq1  TTTGCCACTTCAATTACAAATAAAGATTTACCCTTCTATTCATTTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCACTTCAATTACAAATAAAGATTTACCCTTCTATTCATTTTCTTA  400

seq1  CTTTTAATTCCATCTTCATTTTTTCTTCAACTTTATTAGTTGTCTTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTCCATCTTCATTTTTTCTTCAACTTTATTAGTTGTCTTAGAT  450

seq1  TGTTTATATCATGCTTATTTCTTTCCCCCAAATCACAGAATAATTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATATCATGCTTATTTCTTTCCCCCAAATCACAGAATAATTTTAAA  500

seq1  ACAATTATTCTGCTTTTCTATCTTATATCTTGACCAGAGTCTTCCCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATTCTGCTTTTCTATCTTATATCTTGACCAGAGTCTTCCCTCCC  550

seq1  TCTACTCCTCCTAGTCCACTCTCCATACACTTCTCTGTTTTCTTCAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCCTCCTAGTCCACTCTCCATACACTTCTCTGTTTTCTTCAAATA  600

seq1  AGAGTAGTTCCTTCCAGGGATATTAATCACACACAGCATAACAGGTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGTTCCTTCCAGGGATATTAATCACACACAGCATAACAGGTTGTA  650

seq1  ATAAGACACAGGCACAAACCCTGTATCAGGCTGGAAGAGGTAACCAGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACACAGGCACAAACCCTGTATCAGGCTGGAAGAGGTAACCAGGAC  700

seq1  TCAATTGTTAACTCATGATATTTTCACTCTCCTTCTGTCTTTTCTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGTTAACTCATGATATTTTCACTCTCCTTCTGTCTTTTCTTTTCT  750

seq1  GAACATGTAGCCTTAAACATGCTGAGTATAGATGCTATCACTGACCTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGTAGCCTTAAACATGCTGAGTATAGATGCTATCACTGACCTATG  800

seq1  CCCCTAGGACTTTAAAAACATACATTTTGTAAACATCTGGAATGAGATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGGACTTTAAAAACATACATTTTGTAAACATCTGGAATGAGATTT  850

seq1  TGATTTAAAAAAAAAGGAGATTTGTGGAGATTAAGTATAAGTGAAAGATA  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGATTTAAAAAAAAAGGAGA-TTGTGGAGATTAAGTATAAGTGAAAGATA  899

seq1  TTTCTAGTCAGTTAATATAATACCTTAATATGGAATGCAAGTAAGTATTT  950
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  TTTCTAGTCAGTTAATAT-ATACCTTAATATGG-ATGCAAGTAAGTATTT  947

seq1  CTTATTTTTAAAGTGTATTTTCCCCATAGAAGTGATC-TCTGGTCAAATG  999
      ||||||||||||||||| ||||||||||||||||||| ||||||||||| 
seq2  CTTATTTTTAAAGTGTA-TTTCCCCATAGAAGTGATCTTCTGGTCAAAT-  995

seq1  TAGATGAATTATATGTAGAAATAAGGCAGGGTTTCAAAAATTGTTAGC-A  1048
      ||||||||||||||||||||| || ||| ||||   |||||||||||| |
seq2  TAGATGAATTATATGTAGAAAAAACGCAAGGTT--CAAAATTGTTAGCAA  1043

seq1  GCTCTCTGTTTTAGGACACCATAGTCTGGCATTGAAGGGCTATGAGTATC  1098
      ||| ||   ||||||||  |||||||||||||||||||||||||||||| 
seq2  GCTTTCCTGTTTAGGACCACATAGTCTGGCATTGAAGGGCTATGAGTAT-  1092

seq1  ACAAACTTCATACCAGGTCAGAAGT  1123
      ||| |||||| |||||||| |||||
seq2  ACACACTTCA-ACCAGGTC-GAAGT  1115