BAC Information

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BAC

Clone NameB6Ng01-009G02
Chromosome9 (Build37)
Map Location 31,191,058 - 31,191,534
singlet/doubletsinglet
Overlap genenone
Upstream geneSnx19, LOC666478, Adamts15, Adamts8, Zbtb44, BC038156, St14, Aplp2, EG638580, EG666539, Prdm10
Downstream geneNfrkb, Tmem45b, LOC666558, EG666576, Barx2, LOC100042266, Tpi-rs4, LOC666619, LOC666622, Grit, Kcnj5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009G02.bB6Ng01-009G02.g
ACCDH845336DH845337
length799471
definitionDH845336|Mus musculus domesticus DNA, BAC clone: B6Ng01-009G02, 5' end.DH845337|Mus musculus domesticus DNA, BAC clone: B6Ng01-009G02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagcagaggaatcttaaatagctgggaagcacttaaagaacca
ggagaatgaatctaaatatgcagcagtaggggctaggagggaagaggaac
ctctagaaagtctcagaaacctgggatgtgagaggctatcaggacttaat
ggagatgacattaggcaaagtgcccaacagtggggagatggaaccggaag
agaccacctccagtagatagacacggccctcagttgaggcaggggccacc
cactcatcttcaaattttttaacccgtaattgttcctgtctaaaggaaat
gtagagacaaaaatggagcagagactgaaaaaaaaggccacccagtgacc
agcccagcttgggatccatcccatgagcacacatcaaatcctgacactat
tactgaggccatattctacacacagacaggagcctagcatggctgtcctc
taagaggctctaccagcagctgactgaggcaaatgcagatacagccaccc
attggattgaagttggggaactatatggaagagttagcggaaggactgaa
ggagctgaaggggattgattgcaatcccatagaaagaacaacagtgtcaa
ctaacccagacccctcagagctcccagagactaatctaaaaaccaaggag
tgtacatgagtggtttgtggccccaagcacatatgtagcagaggactgcc
ttgtgtggcctcagtgggagaggatgcgcttaatcctgtggaaattcaat
gccccagggaagcaggatgctggtggtggtgaagtgggagtgggtgggc
aagacagtgagagcaagaaagagatggagaggcagacccagggaaaaaat
gttttcagattatgtgtctaataaaggactgttagccagagtacacaaag
aagaaaaagaaacaaacagtcctagtgagaactggcatgaagatttcttc
ataaagaatatacacaaataaatgaacatgtgaaagtatgctccacatgt
tagcaccagggaagttcaaattaatatttaaacaatacaagctttcaggg
tgcagctcagtggcagagtgcctgcattccgtccctactaccagaaccag
accataatatttactatctagttggaaaaaagatgcaatctctgccaagt
gtggcggcattcatgataatgccagtacttggaggtctaaagcaggaacg
tggcaagtttgatggctaagtgatggagacacttaaaacatcagtgtttg
tgggtgggagggagaagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_31191058_31191534
seq2: B6Ng01-009G02.g_68_544

seq1  GAATTCAAGACAGTGAGAGCAAGAAAGAGATGGAGAGGCAGACCCAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACAGTGAGAGCAAGAAAGAGATGGAGAGGCAGACCCAGGGA  50

seq1  AAAAATGTTTTCAGATTATGTGTCTAATAAAGGACTGTTAGCCAGAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTTTTCAGATTATGTGTCTAATAAAGGACTGTTAGCCAGAGTAC  100

seq1  ACAAAGAAGAAAAAGAAACAAACAGTCCTAGTGAGAACTGGCATGAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAGAAAAAGAAACAAACAGTCCTAGTGAGAACTGGCATGAAGAT  150

seq1  TTCTTCATAAAGAATATACACAAATAAATGAACATGTGAAAGTATGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATAAAGAATATACACAAATAAATGAACATGTGAAAGTATGCTCC  200

seq1  ACATGTTAGCACCAGGGAAGTTCAAATTAATATTTAAACAATACAAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTAGCACCAGGGAAGTTCAAATTAATATTTAAACAATACAAGCTT  250

seq1  TCAGGGTGCAGCTCAGTGGCAGAGTGCCTGCATTCCGTCCCTACTACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTGCAGCTCAGTGGCAGAGTGCCTGCATTCCGTCCCTACTACCAG  300

seq1  AACCAGACCATAATATTTACTATCTAGTTGGAAAAAAGATGCAATCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACCATAATATTTACTATCTAGTTGGAAAAAAGATGCAATCTCTG  350

seq1  CCAAGTGTGGCGGCATTCATGATAATGCCAGTACTTGGAGGTCTAAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGTGGCGGCATTCATGATAATGCCAGTACTTGGAGGTCTAAAGCA  400

seq1  GGAACGTGGCAAGTTTGATGGCTAAGTGATGGAGACACTTAAAACATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGTGGCAAGTTTGATGGCTAAGTGATGGAGACACTTAAAACATCAG  450

seq1  TGTTTGTGGGTGGGAGGGAGAAGGGGA  477
      |||||||||||||||||||||||||||
seq2  TGTTTGTGGGTGGGAGGGAGAAGGGGA  477