BAC Information

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BAC

Clone NameB6Ng01-009O16
Chromosome9 (Build37)
Map Location 17,261,001 - 17,261,950
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434373, LOC100040074
Downstream geneLOC100040090, LOC244710, LOC100040508, EG665548, LOC665554, LOC665567, Chordc1, Naalad2, B020006M18Rik, Map1lc3-ps, Mbd3l2, Zfp558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009O16.bB6Ng01-009O16.g
ACCDH845733DH845734
length1,0671,102
definitionDH845733|Mus musculus domesticus DNA, BAC clone: B6Ng01-009O16, 5' end.DH845734|Mus musculus domesticus DNA, BAC clone: B6Ng01-009O16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgtttagctctgcaattcatttttaaaattagaatatttata
ttgttgatagctagggtttttttttttggttcattatatatttggatatt
agccctgtattggatgtagagttgataaaaacattttcccattctgtaaa
ctgccattttgttatattgaccgtgtactttgccttagagaagtttttca
gtttcatgaggttccaattattaattgttaatattagtgcctgggctgtt
gattttctattcaagaagatatatctggtgccaatgagttcaaggctatc
actcacttttatttctattaggtttagagtaatgggtttgatgttgaggt
ctttaatccacttgcacttgagttttgtgctgtactacagagctataata
ataaataccacattatgttagaataaaaacagacaggttaatcaatggaa
gtgagtcaaatactcagatgtaaatccacacatctatggacacctgagtt
ttgataaagaagcaagaaatacatactgtaaaaaagaaaacatcttcaac
aaatgttgctgctttaactggctatcagtatgtagaaggatgcaaattga
cgtatttgtaacatcctgcacaattctttgttttctcatttagatagtat
ttgtgctttttgttatattccatacttttggtctgctgttattatttgga
ctattaatagaccactatgaattaggcatatacatggttttccctagttc
tgtcgatcttaatatatcttagttgtagcaaactccaggaggaatgctta
catttctctattgaatcatacgggtttttctccttttcaatacgatgcct
cctagatgcggaaagatcattcaacatcgctagccgaatcaagctccatc
tctagctataatcatacttgtaactagacaactacataactttctttacc
tcagattttttactgaaattgatccttcggtgtttaataaattgattcct
aaccacttttctacgacctcttcatttttccccaaccatctgccgatggc
tggtactcaaaccagca
gaattcctttgtacttgaaagaaagtatcattgagaggaaataaaactca
gagaaaaaaatcagaacaatatacttatcccatgactgtttcaaaaatga
gaatcaaagtgaatatattttaatataaatcttgtttctggaaattctga
agttcaaaatctatgggttgatcaatgatttataaatatttacctataga
aagcttatcatttcaggatttataaataactaggaacatttacaaatcat
cctttgcagctaatatttcatttattagttagtcatatttttaagtctaa
cataaaatttttattttaattttttattattttattttcttactggatat
tttctttatttacatttcaaatgttatctcctttcccagttttccccctg
aaaacctcctacccattctcccttcccctgcttctatgagggtgtttccc
tgcccacccacccaccaactcccacctcccgccttggcattatcgtacac
tggggaattaagccgtcacaggaccaagggcctatcctcccatgatgcca
gacaagaccatcctctgctacatatgtgaatggagccatgggtcccccca
tgtgtactctttggttgggggtttagtccctgggaactctgaggagactg
gttggttgatattgtttttctttctatggggttgaaaaccccttcatccc
cttctgtcctttctctaactccttcttttggaaccccgtgttcagtgcaa
tgggtggctatgagcatctgcctctgtacttatcagtctctcttagagcc
tctcagaagtcaggtatatcaggctcctatcagcaagcactttctggaca
tccacaatagtctctgagtttggtgactgtatatggtatggatccccagt
ggggcagtccttggagggcattccttcagtctctgttccacactttgatt
ccttatttcttccctgagtatatgttcctcccttctaagaaggaccaagc
atcactcttattcttcctgttcaggagcttatgtatctttaaattgattt
tgaaattctgagcttgggcaaataccctttaactagaagaaaaacaggtg
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_17261001_17261950
seq2: B6Ng01-009O16.b_171_1113

seq1  ATAAAAACATTTTCCCATTCTGTAAACTGCCATTTTGTTATATTGACCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACATTTTCCCATTCTGTAAACTGCCATTTTGTTATATTGACCGT  50

seq1  GTACTTTGCCTTAGAGAAGTTTTTCAGTTTCATGAGGTTCCAATTATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGCCTTAGAGAAGTTTTTCAGTTTCATGAGGTTCCAATTATTAA  100

seq1  TTGTTAATATTAGTGCCTGGGCTGTTGATTTTCTATTCAAGAAGATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATATTAGTGCCTGGGCTGTTGATTTTCTATTCAAGAAGATATAT  150

seq1  CTGGTGCCAATGAGTTCAAGGCTATCACTCACTTTTATTTCTATTAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCAATGAGTTCAAGGCTATCACTCACTTTTATTTCTATTAGGTT  200

seq1  TAGAGTAATGGGTTTGATGTTGAGGTCTTTAATCCACTTGCACTTGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTAATGGGTTTGATGTTGAGGTCTTTAATCCACTTGCACTTGAGTT  250

seq1  TTGTGCTGTACTACAGAGCTATAATAATAAATACCACATTATGTTAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGTACTACAGAGCTATAATAATAAATACCACATTATGTTAGAAT  300

seq1  AAAAACAGACAGGTTAATCAATGGAAGTGAGTCAAATACTCAGATGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGACAGGTTAATCAATGGAAGTGAGTCAAATACTCAGATGTAAA  350

seq1  TCCACACATCTATGGACACCTGAGTTTTGATAAAGAAGCAAGAAATACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACATCTATGGACACCTGAGTTTTGATAAAGAAGCAAGAAATACAT  400

seq1  ACTGTAAAAAAGAAAACATCTTCAACAAATGTTGCTGCTTTAACTGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAAAAGAAAACATCTTCAACAAATGTTGCTGCTTTAACTGGCTA  450

seq1  TCAGTATGTAGAAGGATGCAAATTGACGTATTTGTAACATCCTGCACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATGTAGAAGGATGCAAATTGACGTATTTGTAACATCCTGCACAAT  500

seq1  TCTTTGTTTTCTCATTTAGATAGTA-TTGTGC-TTTTGTTATATTCCATA  548
      ||||||||||||||||||||||||| |||||| |||||||||||||||||
seq2  TCTTTGTTTTCTCATTTAGATAGTATTTGTGCTTTTTGTTATATTCCATA  550

seq1  CTTTTGGTCTGCTGTTATTATTTGGACTATTAATAGACCACTATGAATTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGTCTGCTGTTATTATTTGGACTATTAATAGACCACTATGAATTA  600

seq1  GGCATATACATGGTTTTCCCTAGTTCTGTCGATCTTAATATATCTTAGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATACATGGTTTTCCCTAGTTCTGTCGATCTTAATATATCTTAGTT  650

seq1  GTAGCAAACTCCAGGAGGAATGCTTACATTTCTCTATTGAATCATTACGG  698
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTAGCAAACTCCAGGAGGAATGCTTACATTTCTCTATTGAATCA-TACGG  699

seq1  GTTCTTCTCCCTTTTCAATACGATGCCTCCATGATGCGGAAAGATCATTC  748
      ||| |||| |||||||||||||||||||||  ||||||||||||||||||
seq2  GTTTTTCT-CCTTTTCAATACGATGCCTCCTAGATGCGGAAAGATCATTC  748

seq1  AACATCGCTAGCCGAATCAAGCTCCATCTCTAGCTATAAATCATACTTGC  798
      ||||||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  AACATCGCTAGCCGAATCAAGCTCCATCTCTAGCTAT-AATCATACTTG-  796

seq1  TACTTAGAACAACTTACATAACTTTC-TTACCTCAGATTTTTTACTGAAA  847
      ||  ||| ||||| |||||||||||| |||||||||||||||||||| ||
seq2  TAACTAG-ACAAC-TACATAACTTTCTTTACCTCAGATTTTTTACTG-AA  843

seq1  ATTGATACCTGGGTGTTTTATAAATTGATTCCCTAAACAACTTTTCTACG  897
      |||||| | | ||||||| |||||||||||||   ||| |||||||||||
seq2  ATTGATCCTTCGGTGTTTAATAAATTGATTCC--TAACCACTTTTCTACG  891

seq1  ACCTTCTTCATTTTTTCCCCAACCATCTGCCGATGTCT-GTACTCAAATC  946
      ||| |||||| |||||||||||||||||||||||| || ||||||||| |
seq2  ACC-TCTTCA-TTTTTCCCCAACCATCTGCCGATGGCTGGTACTCAAACC  939

seq1  AGCA  950
      ||||
seq2  AGCA  943