BAC Information

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BAC

Clone NameB6Ng01-010H06
Chromosome9 (Build37)
Map Location 32,390,211 - 32,577,871
singlet/doubletdoublet
Overlap geneLOC669759, LOC100041398, Ets1
Upstream geneEG666576, Barx2, LOC100042266, Tpi-rs4, LOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1
Downstream geneLOC100041426, LOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010H06.bB6Ng01-010H06.g
ACCDH846118DH846119
length7851,081
definitionDH846118|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H06, 5' end.DH846119|Mus musculus domesticus DNA, BAC clone: B6Ng01-010H06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,390,211 - 32,390,995)(32,576,795 - 32,577,871)
sequence
gaattcaataactccaaagcccgaatctcctaccaaatacagtctggaag
aagagcttgagagtccgcaattcttacttagcggagacaaaacattaaac
aacttttgacatatgcttgtgtgtttatgagatgctgaggaccaaactca
gggccctttacatgttaagcccttagctcctaaggttttaaatgtggtag
gagatgggaagtatcggttacttatattatggagtgaggtaacttctccg
ttccctaacccaaacacacctcaagaaagctgtgtaatttaagatatttg
aagactgaggagggatgatattggaagtcttgtatgaactaggcacacct
tgttactttctattgagccatctatccctccctccctccctccctacctc
tcaccatccatccatccatccatccatccatccatccatccatccatcca
tctatctgacagtccgttggtttttctaaccactgtaccatatctgtcta
ttatttaccaacagggcctctgagcacctgtcatttccagataatactct
ttctattttctggtcattcaagaataagtgtgcagccattgctcgtatgg
gactcaaggacatagcatacaaccctgaatttcagcaaaatgtgtcagga
gagcagggacatacaacacctgtcctggtgacagtctcccaagatgtttc
agctgagcaggaactggaagggtgaatctaggattcctaagtagagacag
cagtagggtggcgtggggtgaggtagggtggggtg
gaattcttttcattagtactggtctacactctttccttgctgacttgttt
ctgctgagaaattagtcccctagcctctgtatgtgatgcgtcttcttctg
tggctatgtgcgtacttgtgaatgcgtgccacagtatccccccccacaag
ttcagagttctgctttgtggggttctcttcacttttatgctagtcccgag
gatcaaacttagactgttaggcttatacagcaagtgccttcaccctctga
gacatctcattggtccctatggatacttttttggttttggttttacattt
atttattctagagattgagggatagcatatgtgtgcttgataacacatac
agatatcagagaacaacttggaaatgcccgcccttcctttcttccttcct
tccttccttcctttccctctttcttccttcctttctttctttctttcttt
ctttctttctttctttctttctttctttctttctttctttctttctatga
tgcaattctgggaaaacacacttgagagcaagcaccctcatccacttatc
catcctcctggcctcatcccctcatccccctcttccacccccaccccagc
ctccttcccctgccacttgtaagagttacgtttaatctttagttttgagc
aatttggcttaattatttcatacttccaatgcttgtgatttcctagatct
gtgggctgacaattttaaacaaatttagaaatattgtagcagttagtagt
acttccaatgttttgttttctttcagttatcctccctacgggttcacaac
tctaattctgtatctctaagcccttcaactcgctccacagttcctagaca
ctccacgcttctcggcttgcagcctctcttccttatgtgcttgattcggg
gcattttttgttgctacatattcatagtcactaatttttcccacagtgta
gaagtccaccattcaatcccactgcggagtttcatcttctttacggtagc
tcatccctctaacagggtgacttagattcctcatgccccttgcctcattc
agtctttccttgctcctttttgggtcttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32390211_32390995
seq2: B6Ng01-010H06.b_46_830

seq1  GAATTCAATAACTCCAAAGCCCGAATCTCCTACCAAATACAGTCTGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAACTCCAAAGCCCGAATCTCCTACCAAATACAGTCTGGAAG  50

seq1  AAGAGCTTGAGAGTCCGCAATTCTTACTTAGCGGAGACAAAACATTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTGAGAGTCCGCAATTCTTACTTAGCGGAGACAAAACATTAAAC  100

seq1  AACTTTTGACATATGCTTGTGTGTTTATGAGATGCTGAGGACCAAACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTGACATATGCTTGTGTGTTTATGAGATGCTGAGGACCAAACTCA  150

seq1  GGGCCCTTTACATGTTAAGCCCTTAGCTCCTAAGGTTTTAAATGTGGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTTTACATGTTAAGCCCTTAGCTCCTAAGGTTTTAAATGTGGTAG  200

seq1  GAGATGGGAAGTATCGGTTACTTATATTATGGAGTGAGGTAACTTCTCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGGAAGTATCGGTTACTTATATTATGGAGTGAGGTAACTTCTCCG  250

seq1  TTCCCTAACCCAAACACACCTCAAGAAAGCTGTGTAATTTAAGATATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAACCCAAACACACCTCAAGAAAGCTGTGTAATTTAAGATATTTG  300

seq1  AAGACTGAGGAGGGATGATATTGGAAGTCTTGTATGAACTAGGCACACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAGGAGGGATGATATTGGAAGTCTTGTATGAACTAGGCACACCT  350

seq1  TGTTACTTTCTATTGAGCCATCTATCCCTCCCTCCCTCCCTCCCTACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTTCTATTGAGCCATCTATCCCTCCCTCCCTCCCTCCCTACCTC  400

seq1  TCACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA  450

seq1  TCTATCTGACAGTCCGTTGGTTTTTCTAACCACTGTACCATATCTGTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGACAGTCCGTTGGTTTTTCTAACCACTGTACCATATCTGTCTA  500

seq1  TTATTTACCAACAGGGCCTCTGAGCACCTGTCATTTCCAGATAATACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACCAACAGGGCCTCTGAGCACCTGTCATTTCCAGATAATACTCT  550

seq1  TTCTATTTTCTGGTCATTCAAGAATAAGTGTGCAGCCATTGCTCGTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTCTGGTCATTCAAGAATAAGTGTGCAGCCATTGCTCGTATGG  600

seq1  GACTCAAGGACATAGCATACAACCCTGAATTTCAGCAAAATGTGTCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGGACATAGCATACAACCCTGAATTTCAGCAAAATGTGTCAGGA  650

seq1  GAGCAGGGACATACAACACCTGTCCTGGTGACAGTCTCCCAAGATGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGGACATACAACACCTGTCCTGGTGACAGTCTCCCAAGATGTTTC  700

seq1  AGCTGAGCAGGAACTGGAAGGGTGAATCTAGGATTCCTAAGTAGAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGCAGGAACTGGAAGGGTGAATCTAGGATTCCTAAGTAGAGACAG  750

seq1  CAGTAGGGTGGCGTGGGGTGAGGTAGGGTGGGGTG  785
      |||||||||||||||||||||||||||||||||||
seq2  CAGTAGGGTGGCGTGGGGTGAGGTAGGGTGGGGTG  785

seq1: chr9_32576795_32577871
seq2: B6Ng01-010H06.g_65_1145 (reverse)

seq1  AACAAGA-CCAAAAAGGAGCTAGGGAAAGACTGAATGA-GCAAGGGGCAT  48
      | ||||| |||||||||||| | ||||||||||||||| |||||||||||
seq2  ATCAAGACCCAAAAAGGAGC-AAGGAAAGACTGAATGAGGCAAGGGGCAT  49

seq1  GAGAAATCTAAGTCA-CCTG-TAGAGGGGTGAGCTACCGTAAAGAAGATG  96
      ||| ||||||||||| |||| ||||||| |||||||||||||||||||||
seq2  GAGGAATCTAAGTCACCCTGTTAGAGGGATGAGCTACCGTAAAGAAGATG  99

seq1  AAACTCGCCAGGTGGGA-TGGATGGTGGAC-TCTACACTGTGGGAAAAAT  144
      ||||||  || |||||| || ||||||||| |||||||||||||||||||
seq2  AAACTCCGCA-GTGGGATTGAATGGTGGACTTCTACACTGTGGGAAAAAT  148

seq1  TAGTGACTATGAATATGTAGCAACAAAAAATGCCCCGAATCAAGCACATA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACTATGAATATGTAGCAACAAAAAATGCCCCGAATCAAGCACATA  198

seq1  AGGAAGAGAGGCTGCAAGCCGAGAAGCGTGGAGTGTCTAGGAACTGTGGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGAGGCTGCAAGCCGAGAAGCGTGGAGTGTCTAGGAACTGTGGA  248

seq1  GCGAGTTGAAGGGCTTAGAGATACAGAATTAGAGTTGTGAACCCGTAGGG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGTTGAAGGGCTTAGAGATACAGAATTAGAGTTGTGAACCCGTAGGG  298

seq1  AGGATAACTGAAAGAAAACAAAACATTGGAAGTACTACTAACTGCTACAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAACTGAAAGAAAACAAAACATTGGAAGTACTACTAACTGCTACAA  348

seq1  TATTTCTAAATTTGTTTAAAATTGTCAGCCCACAGATCTAGGAAATCACA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAAATTTGTTTAAAATTGTCAGCCCACAGATCTAGGAAATCACA  398

seq1  AGCATTGGAAGTATGAAATAATTAAGCCAAATTGCTCAAAACTAAAGATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGGAAGTATGAAATAATTAAGCCAAATTGCTCAAAACTAAAGATT  448

seq1  AAACGTAACTCTTACAAGTGGCAGGGGAAGGAGGCTGGGGTGGGGGTGGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTAACTCTTACAAGTGGCAGGGGAAGGAGGCTGGGGTGGGGGTGGA  498

seq1  AGAGGGGGATGAGGGGATGAGGCCAGGAGGATGGATAAGTGGATGAGGGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGGATGAGGGGATGAGGCCAGGAGGATGGATAAGTGGATGAGGGT  548

seq1  GCTTGCTCTCAAGTGTGTTTTCCCAGAATTGCATCATAGAAAGAAAGAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCTCAAGTGTGTTTTCCCAGAATTGCATCATAGAAAGAAAGAAA  598

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  648

seq1  AAGGAAGGAAGAAAGAGGGAAAGGAAGGAAGGAAGGAAGGAAGAAAGGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGAAAGAGGGAAAGGAAGGAAGGAAGGAAGGAAGAAAGGAA  698

seq1  GGGCGGGCATTTCCAAGTTGTTCTCTGATATCTGTATGTGTTATCAAGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGGCATTTCCAAGTTGTTCTCTGATATCTGTATGTGTTATCAAGCA  748

seq1  CACATATGCTATCCCTCAATCTCTAGAATAAATAAATGTAAAACCAAAAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGCTATCCCTCAATCTCTAGAATAAATAAATGTAAAACCAAAAC  798

seq1  CAAAAAAGTATCCATAGGGACCAATGAGATGTCTCAGAGGGTGAAGGCAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGTATCCATAGGGACCAATGAGATGTCTCAGAGGGTGAAGGCAC  848

seq1  TTGCTGTATAAGCCTAACAGTCTAAGTTTGATCCTCGGGACTAGCATAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTATAAGCCTAACAGTCTAAGTTTGATCCTCGGGACTAGCATAAA  898

seq1  AGTGAAGAGAACCCCACAAAGCAGAACTCTGAACTTGTGGGGGGGGATAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGAGAACCCCACAAAGCAGAACTCTGAACTTGTGGGGGGGGATAC  948

seq1  TGTGGCACGCATTCACAAGTACGCACATAGCCACAGAAGAAGACGCATCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCACGCATTCACAAGTACGCACATAGCCACAGAAGAAGACGCATCA  998

seq1  CATACAGAGGCTAGGGGACTAATTTCTCAGCAGAAACAAGTCAGCAAGGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGAGGCTAGGGGACTAATTTCTCAGCAGAAACAAGTCAGCAAGGA  1048

seq1  AAGAGTGTAGACCAGTACTAATGAAAAGAATTC  1077
      |||||||||||||||||||||||||||||||||
seq2  AAGAGTGTAGACCAGTACTAATGAAAAGAATTC  1081