BAC Information

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BAC

Clone NameB6Ng01-010K07
Chromosome9 (Build37)
Map Location 34,495,783 - 34,496,670
singlet/doubletsinglet
Overlap geneKirrel3
Upstream geneLOC100042343
Downstream geneSt3gal4, Dcps, Tirap, Foxred1, Srpr, C030004A17Rik, Rpusd4, EG434394, Cdon, Ddx25, Pus3, EG627480, LOC100042442, Svs7, Gm846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010K07.bB6Ng01-010K07.g
ACCDH846253DH846254
length885143
definitionDH846253|Mus musculus domesticus DNA, BAC clone: B6Ng01-010K07, 5' end.DH846254|Mus musculus domesticus DNA, BAC clone: B6Ng01-010K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctctaatatgctatgcaccaagaaagcagaatctaggaaaa
tattaacagtgttttctctaggtggtgggataatgggtgttttgaattat
cttgtttagacttgtggtgtgtgtgtgtgtttccaagctttctataatga
gtatacatgacttctgtgatcagaaaaggagagctaagagaaagagtgtt
taaagtatccaatccagttcactccccattgtagggacgagaaatctgat
gctcagagatccgttgaccagttcaacatcttgtattattaacttgaaag
gtcaggaggcaaggcactcccatagagttgcttcatccccacagctcccc
ttagagtctggcagctagacatagctaagcctccatcttaccggtaggaa
atgtcacccaactctccaacttacaccacccacttatcctgaccacatgc
tccctaagtttaaagtgcttcccagtacttccttcagtgtctgcccggag
gtccaggaactcataaaagccagcactagctaaccaggaaggaaaaacag
gctcttctctagcacctgccgtcagccacacattatgttggaattcagaa
gtaaggcagcaacagtggacagagttagcagatgtttcaactcacggcaa
actgaagcatggggctgtttcatcccatttggtggatgaagagactcatg
catgctcagactgccgatgcagagctgagggaaacttaatctcttgcttt
ctgatctgagccgccttctcatcatcactaagctaccacttatctggcac
caattaaagtccatggtgtcttagttgtattcccggaatgacacaactgc
atcctaatcttgagattgcagctggctctacactt
aggtacgggcacacgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtagtgtgagaaacaaacacaataacttgaacccctgtggttgt
attatttggttgttttgatttattatgataagtagattgtgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_34495783_34496670
seq2: B6Ng01-010K07.b_43_927

seq1  GAATTCACTCTCTAATATGCTATGCACCAAGAAAGCAGAATCTAGGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTCTAATATGCTATGCACCAAGAAAGCAGAATCTAGGAAAA  50

seq1  TATTAACAGTGTTTTCTCTAGGTGGTGGGATAATGGGTGTTTTGAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACAGTGTTTTCTCTAGGTGGTGGGATAATGGGTGTTTTGAATTAT  100

seq1  CTTGTTTAGACTTGTGGTGTGTGTGTGTGTTTCCAAGCTTTCTATAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTAGACTTGTGGTGTGTGTGTGTGTTTCCAAGCTTTCTATAATGA  150

seq1  GTATACATGACTTCTGTGATCAGAAAAGGAGAGCTAAGAGAAAGAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACATGACTTCTGTGATCAGAAAAGGAGAGCTAAGAGAAAGAGTGTT  200

seq1  TAAAGTATCCAATCCAGTTCACTCCCCATTGTAGGGACGAGAAATCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATCCAATCCAGTTCACTCCCCATTGTAGGGACGAGAAATCTGAT  250

seq1  GCTCAGAGATCCGTTGACCAGTTCAACATCTTGTATTATTAACTTGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAGATCCGTTGACCAGTTCAACATCTTGTATTATTAACTTGAAAG  300

seq1  GTCAGGAGGCAAGGCACTCCCATAGAGTTGCTTCATCCCCACAGCTCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAGGCAAGGCACTCCCATAGAGTTGCTTCATCCCCACAGCTCCCC  350

seq1  TTAGAGTCTGGCAGCTAGACATAGCTAAGCCTCCATCTTACCGGTAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTCTGGCAGCTAGACATAGCTAAGCCTCCATCTTACCGGTAGGAA  400

seq1  ATGTCACCCAACTCTCCAACTTACACCACCCACTTATCCTGACCACATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCCAACTCTCCAACTTACACCACCCACTTATCCTGACCACATGC  450

seq1  TCCCTAAGTTTAAAGTGCTTCCCAGTACTTCCTTCAGTGTCTGCCCGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAGTTTAAAGTGCTTCCCAGTACTTCCTTCAGTGTCTGCCCGGAG  500

seq1  GTCCAGGAACTCATAAAAGCCAGCACTAGCTAACCAGGAAGGAAAAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGAACTCATAAAAGCCAGCACTAGCTAACCAGGAAGGAAAAACAG  550

seq1  GCTCTTCTCTAGCACCTGCCGTCAGCCACACATTATGTTGGAATTCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTCTAGCACCTGCCGTCAGCCACACATTATGTTGGAATTCAGAA  600

seq1  GTAAGGCAGCAACAGTGGACAGAGTTAGCAGATGTTTCAACTCACGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCAGCAACAGTGGACAGAGTTAGCAGATGTTTCAACTCACGGCAA  650

seq1  ACTGAAGCATGGGGCTGTTTCATCCCATTTGGTGGATGAAGAGACTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCATGGGGCTGTTTCATCCCATTTGGTGGATGAAGAGACTCATG  700

seq1  CATGCTCAGACTGCCGATGCAGAGCTGAGGGAAACTTAATCTCATGCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATGCTCAGACTGCCGATGCAGAGCTGAGGGAAACTTAATCTCTTGCTTT  750

seq1  CTGATCTGAGCCGCCTTCCTCATCATCACTAAGCTACCACATATCTGGCA  800
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  CTGATCTGAGCCGCCTT-CTCATCATCACTAAGCTACCACTTATCTGGCA  799

seq1  CCAATTAAAAGTCCATGGTGTCTTAGTTGTATTCCCGGAAGGACCACAAC  850
      |||||| ||||||||||||||||||||||||||||||||| || ||||||
seq2  CCAATT-AAAGTCCATGGTGTCTTAGTTGTATTCCCGGAATGA-CACAAC  847

seq1  TGCATCCTAATCTTGAGATTGCAGCTGGCTCTACACCT  888
      |||||||||||||||||||||||||||||||||||| |
seq2  TGCATCCTAATCTTGAGATTGCAGCTGGCTCTACACTT  885