BAC Information

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BAC

Clone NameB6Ng01-019I17
Chromosome9 (Build37)
Map Location 82,816,970 - 82,817,856
singlet/doubletsinglet
Overlap genePhip
Upstream gene4930486G11Rik, LOC100039085, Irak1bp1
Downstream geneLOC100039144, Hmgn3, LOC100039159, 4930431B11Rik, EG619900, LOC100039186, LOC100039200, Sh3bgrl2, LOC100039222, Elovl4, Ttk, EG546150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019I17.bB6Ng01-019I17.g
ACCDH852600DH852601
length8891,068
definitionDH852600|Mus musculus domesticus DNA, BAC clone: B6Ng01-019I17, 5' end.DH852601|Mus musculus domesticus DNA, BAC clone: B6Ng01-019I17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaattctcctaattggtaaggtagagaaaatgctgagtaatcca
tcataaaattgaattataagttaattctactaccctttaaaagatagttt
taaaactgtaagtttaggaatgaatctgattattcagaagccaaagacta
ctggactggggcggggtgggggtgctgtagtgacaggactgagcccagta
cctcgtgagtgagtattaggtaagcattcacttcaacacctgacgatata
gcctcagccctaaacatatatttttaagttcttgtatattttaagaattc
gttcaattaaagacatactctctttcctattttctggctgtcagcccaat
ggtgaatttacttactcattttataagcttcaatttttaaatttcctaaa
gtaatacttattatataagcattcacagagtctaaggataagaggattat
tcatcattcttaaattctacaaaggatgactagacatgccaaataatact
caaaaatatttacaaaatttaatgtaaattaggataagcacaacaatatc
agagtatgcatttggattcctcaaagctttgtgatatctaacagctctga
ttagttacactaaaccaaatagctaacctgaagctgcagctgaacaatga
ccaataagagagaccatcagcttctatttcatcctaaaattgtttttaat
ttcttagtagcagagctggatgcttttttctgccatatatccattaaaaa
agaaaaaaaggcaatgtagtgaacagagggaaaaagtatggcagtcacaa
agatcactgaagagccactcaagaattatatcactgttaagttgttattc
ctagacacatcactaactgggtctaactgggagttgcta
gaattcacatccaccaaacaagccctacagagaatactgaaagcatactc
agactgaagagaagcacagtgaagaagtttgcagaaaggaaacaagtgaa
actataattactggggtaaatttaggagtaaaaccgtcaacagcagaaac
acaacaactgcaaaatgacagcaaccaacacacaatttctcaatagtaat
tttaaatattaatgacctcaattcccaaatcaaaagacacaggttagctg
aatagaatatgaagcaaactatatctctttgttctccacaaaaaacctac
cttgctttcaatgataaatattacactccagcaaaagaatacaaaacaat
attcaaaacaaataggaccagcaaataagcaaatttcactatcctaatat
cagataggagagcttcaagttgaaattagctagaagggataaagaaggac
gctccattctgatcaattgaacaattaacaaagaagacattatactttat
ccatcaaattctggtggatcaagttttgtaaattgtatactactggactt
aaagccacagattaaccccaactcagtagtggtaggtgatttcaatgtcc
ccattttcccaatagatcagtcatgggaacaaaaactaaacagagaaaac
actggaattaaataacattataaatcaagtggacctttatagatatcaac
agaatattttcatcaaagcgccaaagaatatacattttactcagcagttt
gtggaatattttttctagagagacaacatactggggcacaaaataattct
taacaaatttaaaaaattgaaaatagttccatgctttttactgaccacag
tgcaataaagcttaaaatcagcagagaaagacccaactcttttaaatata
tgaactcgttgagattaatatcacactactgaatatgagtagtcaaaatc
agaaaatataaacaattgaacagctagaggaatatagtcaaatctacata
tttggtgaaggaagacttcttggatgctccactttttaacattatgggca
aactatgaccaagggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_82816970_82817856
seq2: B6Ng01-019I17.b_39_927

seq1  GAATTCTAATTCTCCTAATTGGTAAGGTAGAGAAAATGCTGAGTAATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTCTCCTAATTGGTAAGGTAGAGAAAATGCTGAGTAATCCA  50

seq1  TCATAAAATTGAATTATAAGTTAATTCTACTACCCTTTAAAAGATAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAATTGAATTATAAGTTAATTCTACTACCCTTTAAAAGATAGTTT  100

seq1  TAAAACTGTAAGTTTAGGAATGAATCTGATTATTCAGAAGCCAAAGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGTAAGTTTAGGAATGAATCTGATTATTCAGAAGCCAAAGACTA  150

seq1  CTGGACTGGGGCGGGGTGGGGGTGCTGTAGTGACAGGACTGAGCCCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTGGGGCGGGGTGGGGGTGCTGTAGTGACAGGACTGAGCCCAGTA  200

seq1  CCTCGTGAGTGAGTATTAGGTAAGCATTCACTTCAACACCTGACGATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGAGTGAGTATTAGGTAAGCATTCACTTCAACACCTGACGATATA  250

seq1  GCCTCAGCCCTAAACATATATTTTTAAGTTCTTGTATATTTTAAGAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGCCCTAAACATATATTTTTAAGTTCTTGTATATTTTAAGAATTC  300

seq1  GTTCAATTAAAGACATACTCTCTTTCCTATTTTCTGGCTGTCAGCCCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTAAAGACATACTCTCTTTCCTATTTTCTGGCTGTCAGCCCAAT  350

seq1  GGTGAATTTACTTACTCATTTTATAAGCTTCAATTTTTAAATTTCCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTTACTTACTCATTTTATAAGCTTCAATTTTTAAATTTCCTAAA  400

seq1  GTAATACTTATTATATAAGCATTCACAGAGTCTAAGGATAAGAGGATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATACTTATTATATAAGCATTCACAGAGTCTAAGGATAAGAGGATTAT  450

seq1  TCATCATTCTTAAATTCTACAAAGGATGACTAGACATGCCAAATAATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATTCTTAAATTCTACAAAGGATGACTAGACATGCCAAATAATACT  500

seq1  CAAAAATATTTACAAAATTTAATGTAAATTAGGATAAGCACAACAATATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATATTTACAAAATTTAATGTAAATTAGGATAAGCACAACAATATC  550

seq1  AGAGTATGCATTTGGATTCCTCAAAGCTTTGTGATATCTAACAGCTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATGCATTTGGATTCCTCAAAGCTTTGTGATATCTAACAGCTCTGA  600

seq1  TTAGTTACACTAAACCAAATAGCTAACCTGAAGCTGCAGCTGAACAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTACACTAAACCAAATAGCTAACCTGAAGCTGCAGCTGAACAATGA  650

seq1  CCAATAAGAGAGACCATCAGCTTCTATTTCATCCTAAAATTGTTTTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAGAGAGACCATCAGCTTCTATTTCATCCTAAAATTGTTTTTAAT  700

seq1  TTCTTAGTAGCAGAGCTGGATGC-TTTTTCTGCCATATATCCATT-AAAA  748
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  TTCTTAGTAGCAGAGCTGGATGCTTTTTTCTGCCATATATCCATTAAAAA  750

seq1  AGAAAAAAAGGCAATGTAGTGAACAGAGGGAAAAAGTATGGCAGTCACAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGGCAATGTAGTGAACAGAGGGAAAAAGTATGGCAGTCACAA  800

seq1  AGATCACAGAAGAGCCACTCAAGAATTATATCACTGTTAAGTTGTTATTC  848
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTGAAGAGCCACTCAAGAATTATATCACTGTTAAGTTGTTATTC  850

seq1  CTAGACACATCACTAACTGGGTCTAACTGGTAGTTGCTA  887
      |||||||||||||||||||||||||||||| ||||||||
seq2  CTAGACACATCACTAACTGGGTCTAACTGGGAGTTGCTA  889