MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-023G13
Chromosome	9 (Build37)
Map Location	81,312,778 - 81,313,573
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG666534
Downstream gene	LOC100039038, Htr1b, LOC671392, 4930486G11Rik, LOC100039085
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG666534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666534 MGI:3644503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Htr1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15551 MGI:96274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 246 ESTs, 17 Proteins

name	4930486G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75033 MGI:1922283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039038 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260104 GeneID:100039038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100039038 transcript_id : XM_001472137.1

name	Htr1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754257 GeneID:15551 MGI:96274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 1B transcript_id : NM_010482.1

name	LOC671392 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260100 GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 245 ESTs, 17 Proteins product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 1 transcript_id : XM_001472004.1

name	LOC671392 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260102 GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 170 ESTs, 1 Protein product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 2 transcript_id : XM_001472036.1

name	4930486G11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803039 GeneID:75033 MGI:1922283
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930486G11 gene transcript_id : NM_175213.3

name	LOC100039038 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260105 GeneID:100039038
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472187.1

name	Htr1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754258 CCDS:CCDS23370.1 GeneID:15551 MGI:96274
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : 5-HT1B receptor; 5-HT<1B> receptor product : 5-hydroxytryptamine (serotonin) receptor 1B protein_id : NP_034612.1

name	LOC671392 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260101 GeneID:671392
definition	codon_start : 1 product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 1 protein_id : XP_001472054.1

name	LOC671392 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260103 GeneID:671392
definition	codon_start : 1 product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 2 protein_id : XP_001472086.1

name	4930486G11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424840 CCDS:CCDS23371.1 GeneID:75033 MGI:1922283
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC75033 protein_id : NP_780422.1

name	EG666534 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666534
definition	number : 3 pseudo : _no_value

name	EG666534 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666534
definition	number : 2 pseudo : _no_value

name	EG666534 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666534
definition	number : 1 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 4 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 3 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 2 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 1 pseudo : _no_value

clone name	MSMg01-115P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-161A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-316K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057L13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-023G13.b	B6Ng01-023G13.g
ACC	DH855338	DH855339
length	906	798
definition	DH855338\|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G13, 5' end.	DH855339\|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G13, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaatactgaatggctgagaaacacctgaaaaaatg ttcagcatccttaatcatcagggaaatcaaaacaaccctgagattccatc tcacaccagtcagaatggctaagatcaaaaattcaggtgacagcagatgc tggcaaggatgtggagagagaggaacactcctccatagttggtggaattg taagcttatacaaccactctggaaatcagtctggtggttcctcagaaaat tggacatagtactactggaggatcccgcaatacctctcctaggaatatat ccagaagatgttccaaccggtaagaaggacacatgctccactatgttcat agcagccttatttgtaatagccagaagctggaaagaacccagatgcccct caacagatttatggatacagaaaatgtggtagatttacacaatagagtac tactcagctattaaaaagaatgaatttatgaaatttctaggcaaatggat ggacctggagggcatcatcctgagtgaggtaacccaatcacaaaagaact cacatgatatgtactcactgataagtggatattagcccagaaacttagaa tatcaaagatacaagatacaatttgcaaaacacatgaaactcaagaagga tgaagactaaagtgtggacactttgccccttcttagaactgggtttggtt tttgtagatgggatggatccgcaagtgtggtgatctctggggggactttt cttcagtctctgctccattattatttatttattatttatttatttattta tttatttgtttcgtaattattatcatggcggattcttagatggaccatct gggttaaattttgaatggtgtggaccctcccactctgggttggctatctc cgtaga	gaattctgtgtcccttttaaggttgttcctttgtttctttattttttgtt tgtttgttttagtttttcaatgatggatgaaaaaaaagcattaagttgtg agcctctgaggacttaagtgaaacaattgcctaccatgcagtcagcccat tatagtggggagctagctcctatcgttttaaccaagcttattaaggaaag gagagggtccttcactttggggaaccctttctctaactccttggatttta ggctcagcctttatactatgaaagaagtccacattctccctctccctgct ttgcatttgattctgtctgtctgagtcttgaggaccattgacttctagca gtgttatccccttatttaaaaataggagaaataaaaatgtgaaattcttc ccagcacttgggaggcagaggcaggcgaatttctgagttcgaggccagcc tggtctacagagtgagttccaggacagccagggctacacagagaaaccct gtctagaaaaaacaaaaaaacaaaaacaaaacaaacaaacaaacaaaaaa gtgaaattctcatagcaagaacaaataaactggggcttctctttaaaatg agaaaatattttattaaaactgttttgttccaatataaatagtagggtcc aagggaaagatgtgaataaaggtagaaaacaacaaaaattttttccctgt agagttgaaagagaacatatatagatcctatgagatatccagacctgaaa gaagctcccgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality values	Open. Hide. 47 41 17 29 57 53 47 31 30 53 53 53 57 47 47 61 61 34 30 53 53 43 61 61 61 43 13 12 14 8 8 8 4 8 9 10 10 12 28 50 50 61 61 55 61 61 61 61 43 49 49 61 49 49 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 28 59 19 20 27 26 35 30 23 52 52 61 61 59 61 61 61 61 61 61 59 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 59 52 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 59 59 59 61 61 61 59 61 61 59 59 59 59 55 59 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 59 52 61 55 55 52 49 52 55 55 52 52 61 61 55 55 61 61 61 61 61 61 55 61 55 52 55 52 61 55 61 61 55 61 43 55 52 52 52 55 55 61 61 61 61 61 61 61 61 61 61 55 55 61 61 55 61 61 61 61 55 55 50 38 55 41 50 50 55 55 55 55 61 55 55 55 61 50 41 47 61 61 61 55 43 55 61 49 55 61 61 61 61 61 55 61 61 61 61 47 61 61 55 61 47 32 61 61 43 49 45 49 34 43 49 61 61 53 53 45 61 61 61 43 61 27 52 50 50 52 52 52 52 53 53 50 53 50 50 50 61 50 61 61 53 61 61 53 52 40 61 61 61 50 18 22 20 8 13 24 53 43 31 61 61 61 47 45 33 42 33 45 61 61 53 31 39 30 47 61 39 53 61 61 31 35 61 53 52 61 53 61 61 40 61 61 50 45 47 52 42 42 47 30 47 17 30 42 28 53 52 42 25 40 53 19 47 53 47 42 47 43 31 42 46 47 36 28 53 27 53 57 47 57 57 53 57 52 31 53 38 53 53 19 53 35 24 42 45 53 43 53 25 33 22 53 43 45 42 40 28 53 52 40 39 30 36 53 29 35 45 47 57 57 57 50 50 50 30 50 53 20 53 43 31 45 38 57 53 42 53 36 47 31 14 57 53 53 34 50 30 50 33 23 12 47 47 42 39 27 45 42 30 36 37 45 24 32 10 10 13 14 50 24 40 35 25 45 42 32 37 23 36 27 33 43 46 46 46 38 35 24 14 53 53 23 36 9 57 24 22 7 5 11 17 14 40 50 23 19 30 33 33 23 18 8 8 9 6 11 39 17 23 8 34 29 32 30 22 14 23 28 35 14 31 50 41 13 21 53 32 27 28 53 19 39 32 40 37 17 29 40 23 15 9 7 6 7 10 11 8 19 34 17 29 14 4 9 21 19 17 24 22 12 34 12 19 29 37 11 57 6 24 9 12 15 8 7 15 30 18 30 10 10 14 10 11 27 29 24 21 19 11 11 7 28 33 30 13 10 17 17 23 27 10 18 23 9 21 21 13 23 21 11 8 25 13 9 13 8 17 11 8 8 20 9 13 17 13 17 29 11 10 17 20 7 11 14 9 10 18 5	Open. Hide. 55 61 37 49 13 13 12 13 10 10 26 12 12 19 19 35 59 59 59 59 61 59 49 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 49 43 28 28 35 30 49 52 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 55 55 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 59 49 59 59 52 59 61 61 61 43 59 59 59 59 52 59 59 61 61 61 59 59 59 59 59 52 59 59 59 50 43 52 52 50 44 45 52 61 61 59 52 59 59 52 52 52 43 43 49 59 61 61 61 61 61 61 61 61 61 59 59 55 59 59 59 59 49 52 49 50 49 49 59 59 59 52 61 61 52 49 52 59 52 39 49 37 52 52 52 61 61 61 61 61 59 61 61 61 61 59 61 61 59 61 61 59 59 39 44 49 49 52 49 29 36 59 59 61 61 61 61 59 59 59 49 43 41 59 52 59 52 52 52 45 41 49 49 52 49 50 49 49 61 61 61 61 61 61 61 59 49 59 52 59 59 49 27 44 59 52 52 61 59 59 59 59 59 59 59 59 61 59 44 55 61 61 59 59 59 61 59 59 52 59 52 59 52 50 59 59 59 59 52 52 52 52 49 59 59 59 59 61 61 61 59 61 61 61 61 61 59 59 59 59 61 61 59 59 61 59 59 59 59 59 35 49 49 43 45 61 61 59 59 61 59 59 59 59 59 59 59 59 59 59 61 59 59 43 59 52 52 61 61 61 52 52 49 49 49 49 52 49 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 50 50 52 50 55 61 55 61 61 61 55 55 55 52 52 52 52 52 49 43 28 30 28 37 43 41 61 61 61 55 52 55 43 49 41 61 52 55 50 49 43 61 49 49 55 61 55 55 55 50 50 50 61 45 55 55 55 49 61 41 47 32 49 31 34 43 50 50 55 43 34 49 49 49 49 37 31 61 55 55 61 61 55 50 49 49 31 38 35 52 61 50 35 35 33 35 26 29 32 47 35 43 35 43 24 32 43 35 61 53 50 45 43 31 38 35 43 50 50 50 53 53 50 61 50 61 50 50 50 50 43 50 50 61 29 38 38 45 38 35 33 33 28 35 16 27 38 34 35 34 28 42 47 31 35 27 38 27 34 35 42 28 33 61 61 61 61 53 61 61 50 57 57 57 57 42 40 39 38 45 43 45 39 43 50 45 47 42 39 32 45 34 47 35 38 27 20 38 43 38 34 34 32 43 36 38 53 36 57 57 43 36 46 46 53 38 53 53 50 53 53 53 47 39 45 57 57 57 53 52 53 53 50 31 28 31 32 32 50 45 57 57 17 22 10 8 15 11 9 33 52 57 52 50 52 46 50 33 52 45 52 37 47 35 28 28 26 26 27 43 43 46 47 41 43 38 40 21 53 42 50 41 53 40 45 53 32 46 53 21 53 50 53 47 43 43 45 33 25 23 23 36 57 46 25 36 57 57 50 30 36 17 22 17 30 38 37 50 50 53 40 22 43 40 50 47 46 34 41 19 39 37 29 25 38 47 53 32 52 40 40 31 32 20 24 23 31 40 29 40 23 18 16 34 27 9 14 28 30 44 20 13 32 27 53 53 53 24 37 30 11 14 6 20 24 23 17 40 29 33 45 21 53 40 53 40 53 39 37 33 37 32 53 37 45 53 53 53 47 39 47 34 37 32 44 31 30 20 17 8 13 9 19 24 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_81312778_81313573
seq2: B6Ng01-023G13.g_71_868 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACTCGGG-GCTTCTT  49
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CACACACACACACACACACACACACACACACACACACTCGGGAGCTTCTT  50

seq1  TCAGGTCTGGATATCTCATAGGATCTATATATGTTCTCTTTCAACTCTAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCTGGATATCTCATAGGATCTATATATGTTCTCTTTCAACTCTAC  100

seq1  AGGG-AAAAATTTTTGTTGTTTTCTACCTTTATTCACATCTTTCCCTTGG  148
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAAATTTTTGTTGTTTTCTACCTTTATTCACATCTTTCCCTTGG  150

seq1  ACCCTACTATTTATATTGGAACAAAACAGTTTTAATAAAATATTTTCTCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACTATTTATATTGGAACAAAACAGTTTTAATAAAATATTTTCTCA  200

seq1  TTTTAAAGAGAAGCCCCAGTTTATTTGTTCTTGCTATGAGAATTTCACTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGAGAAGCCCCAGTTTATTTGTTCTTGCTATGAGAATTTCACTT  250

seq1  TTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTTTGTTTTTTCTAGACAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTTTGTTTTTTCTAGACAG  300

seq1  GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGG  350

seq1  CTGGCCTCGAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGTGCTGGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCGAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGTGCTGGGA  400

seq1  AGAATTTCACATTTTTATTTCTCCTATTTTTAAATAAGGGGATAACACTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCACATTTTTATTTCTCCTATTTTTAAATAAGGGGATAACACTG  450

seq1  CTAGAAGTCAATGGTCCTCAAGACTCAGACAGACAGAATCAAATGCAAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGTCAATGGTCCTCAAGACTCAGACAGACAGAATCAAATGCAAAG  500

seq1  CAGGGAGAGGGAGAATGTGGACTTCTTTCATAGTATAAAGGCTGAGCCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAGGGAGAATGTGGACTTCTTTCATAGTATAAAGGCTGAGCCTA  550

seq1  AAATCCAAGGAGTTAGAGAAAGGGTTCCCCAAAGTGAAGGACCCTCTCCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAGGAGTTAGAGAAAGGGTTCCCCAAAGTGAAGGACCCTCTCCT  600

seq1  TTCCTTAATAAGCTTGGTTAAAACGATAGGAGCTAGCTCCCCACTATAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAATAAGCTTGGTTAAAACGATAGGAGCTAGCTCCCCACTATAAT  650

seq1  GGGCTGACTGCATGGTAGGCAATTGTTTCACTTAAGTCCTCAGAGGCTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGACTGCATGGTAGGCAATTGTTTCACTTAAGTCCTCAGAGGCTCA  700

seq1  CAACTTAATGCTTTTTTTTCATCCATCATTGAAAAACTAAAACAAACAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAATGCTTTTTTTTCATCCATCATTGAAAAACTAAAACAAACAAA  750

seq1  CAAAAAATAAAGAAACAAAGGAACAACCTTAAAAGGGACACAGAATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATAAAGAAACAAAGGAACAACCTTAAAAGGGACACAGAATTC  798

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information