BAC Information

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BAC

Clone NameB6Ng01-028I10
Chromosome9 (Build37)
Map Location 115,810,541 - 115,811,085
singlet/doubletsinglet
Overlap genenone
Upstream geneGpd1l, LOC100043813, Osbpl10, LOC100043812, Stt3b, LOC100039567, LOC670467, EG546164
Downstream geneGadl1, EG668829, Tgfbr2, LOC100043817, LOC100043819, D730003K21Rik, Rbms3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028I10.bB6Ng01-028I10.g
ACCDH858980DH858981
length1,238940
definitionDH858980|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I10, 5' end.DH858981|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagcccatggtcagctcaaggactttctaggatgctatatcct
gtcctactacttctaagacctcctttgcctccaaatttttatctatataa
tatgttgctctgacaaagctatggaaatattcctatgcttatcattaaca
aaatgggcagtatgtagctgctgatctaaagctatggtagatacattttt
aaagtttgcattctcagattattaaaccaaggatcattttctaactctaa
taggcagcaaaacataagcaggtctcttacaaaaacataacagtagattc
cttatctaaattaggatctacacaattagttaattgacaagaattacaat
gaatataaaaagtcttcccaagattggcaatcttaacttttaaaattatc
taacaataagcatataggtaaggtacacaaactttcatagcaataaggag
ctggcctgaatggccaaaaacagtgtctctgacgaaagcatcttgtacat
tctctgtaccagtctttttgcctcacgagtcagtttttttagttgtttgt
attttaagttggcaccaggttggtacttcttgctgcagcccatggtggag
atacgaagtttctttatctgtttgtaagtggctgctctctgatttctcct
cttttgtgcactcaacacagctttctggtcaccactgtcagggcactcac
aggtcacaggtcagcctgtcacattggaagctagcatgctcttgtagcat
tctgtggaaaaaacagaaacattcccccttttccccatattaagtatctg
aacaggatcatggcaagtgccaataagtggatcctttttatctgccctag
acactattatatccagttttttcaaaaacaaaaatgtgatccaaataatg
tgcatggggatataatttccttcctcccttctttgttttaaagagtgtag
tttttaaagttttccataccttgtctttgagatataaatatctcagtaat
gtgtgtacataaatgtgacaaacatctcaatctttggctgtatagcagtt
atttgattgaacctcagcagcaaaaaaaaaaaaaaaaatcacacagcatg
actaactatactttagtagtggctttctgtaagacgtgtattgaagacta
acgttccaagtcaatggcatttatatggatccttgccatgtagtaggctc
ggattaacccagtggtggcacgggcgtacttgagggag
gaattccattgctcagccaggaggctctctgaaacacaaaccaatcatta
aagacagaaggaaaatatttgagccaaccaggctgtggccatgtactgtc
ctggacaatatcagatatttctgtttctagtttattgggtaaagtagatt
atgtggccaaacctgacaagaacaggatcagaagataatgataatctttc
ctcagagaagatttataataacctaaggagataaacctctgggtgttttt
gtgaaggagttttccaagaggattaaatgaggagagataacacaccctga
atgcacatgtttgtgaataagaatatagcctaccccacaggccatctgga
agaggaaagaatgtgaaaactcagagggcagaattggtaaaagcatatca
gttatagttctgcttgttgtgatgaaaaatccaacacaaagcaatgtaaa
gaggaaggaagagttatttggctcacagtctgaggtggtaccatcaataa
cagtgaagaagacagatggtaagagtgtgggggaggctggtcacactgtg
tctgcagtcaggaagcagtcagagatgaatgctggtgcccactcatcttt
gtcactcagcccatggctccaccccatgggatgatgttactcaaactcag
agttgtcagaagccatctaggaaaggctaaaggcatgggagtgaggtttc
tggagatggcccaacattttgtgtggcatgtgatgggtgagctctcagaa
tgcagggtccttagagacttcatcccagcattgagtcttgctgctgatat
gcctctcctgtcactgtggcataatctaatgattcctgaacatcagccta
ccctatcgggccaagtccctgcaatcaacatgaatatgaactttcatgaa
ttaatgctatttagatgaattaatggcttatagattcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_115810541_115811085
seq2: B6Ng01-028I10.g_65_609 (reverse)

seq1  TGTGACCAGCCTCCCCCACACTCTTACCATCTGTCTTCTTCACTGTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCAGCCTCCCCCACACTCTTACCATCTGTCTTCTTCACTGTTATT  50

seq1  GATGGTACCACCTCAGACTGTGAGCCAAATAACTCTTCCTTCCTCTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTACCACCTCAGACTGTGAGCCAAATAACTCTTCCTTCCTCTTTAC  100

seq1  ATTGCTTTGTGTTGGATTTTTCATCACAACAAGCAGAACTATAACTGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTGTGTTGGATTTTTCATCACAACAAGCAGAACTATAACTGATA  150

seq1  TGCTTTTACCAATTCTGCCCTCTGAGTTTTCACATTCTTTCCTCTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTACCAATTCTGCCCTCTGAGTTTTCACATTCTTTCCTCTTCCAG  200

seq1  ATGGCCTGTGGGGTAGGCTATATTCTTATTCACAAACATGTGCATTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTGTGGGGTAGGCTATATTCTTATTCACAAACATGTGCATTCAGG  250

seq1  GTGTGTTATCTCTCCTCATTTAATCCTCTTGGAAAACTCCTTCACAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTATCTCTCCTCATTTAATCCTCTTGGAAAACTCCTTCACAAAAA  300

seq1  CACCCAGAGGTTTATCTCCTTAGGTTATTATAAATCTTCTCTGAGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGAGGTTTATCTCCTTAGGTTATTATAAATCTTCTCTGAGGAAAG  350

seq1  ATTATCATTATCTTCTGATCCTGTTCTTGTCAGGTTTGGCCACATAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATTATCTTCTGATCCTGTTCTTGTCAGGTTTGGCCACATAATCT  400

seq1  ACTTTACCCAATAAACTAGAAACAGAAATATCTGATATTGTCCAGGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACCCAATAAACTAGAAACAGAAATATCTGATATTGTCCAGGACAG  450

seq1  TACATGGCCACAGCCTGGTTGGCTCAAATATTTTCCTTCTGTCTTTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGCCACAGCCTGGTTGGCTCAAATATTTTCCTTCTGTCTTTAATG  500

seq1  ATTGGTTTGTGTTTCAGAGAGCCTCCTGGCTGAGCAATGGAATTC  545
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTGTGTTTCAGAGAGCCTCCTGGCTGAGCAATGGAATTC  545