BAC Information

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BAC

Clone NameB6Ng01-031F20
Chromosome9 (Build37)
Map Location 113,382,417 - 113,383,504
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043800, EG622110, LOC100039391, LOC100043801
Downstream geneLOC100043802, LOC636680, Pdcd6ip, Clasp2, Ubp1, Fbxl2, Susd5, EG665719, 4921528I07Rik, Bcl2a1c, 4930520O04Rik, Crtap, Glb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031F20.bB6Ng01-031F20.g
ACCDH861001DH861002
length1,0611,151
definitionDH861001|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F20, 5' end.DH861002|Mus musculus domesticus DNA, BAC clone: B6Ng01-031F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacccgaggaatacggaatggctgagaagcacctgaaaaaatg
ttcaacatcctcaatcatcagagaaatgcaaatcaaaacaatgctgagat
tccatctcacaccagtcagaatggctaagataaaaaattcaggtaacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggta
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccacaatacctctcctgggc
atatatccagaaaatgtcccaaccggtaagaagaactctcaagattttaa
gagtgtgtaaaaagtgaaagtgaactctactacatctcttaattttcact
aataaatgtatgctgtacagtgcacagcaaggatgcctcttcattctagt
gaatatatctgtgggatattattataatataagtgaaacattatttgtag
tatttcttaaaataaccattaataattagtaattggtatttaattgtgtg
gatttgccattacctcctcaataaatggtgagccatttcaggtgctaagt
attactaatagtgcttcatccttttattttcttggttaacatacaaatgg
tagtttcattatgaatttttatatatacttacgattgtaatttgcttata
ttagactccataatacacccccatgccatcatacccctgtatttcccttc
ttccctaccagtaggtatccacaggtaggtagatatccatccacagatag
atagattatatgtctactctactcttaatgttgtgtgtgtgtgtgtatcc
taaaagcttattcaattcagtaatatttcacctttatagccctttaaaat
cttaacatcttgagaggcacatgtgcgatcagaagagacactggttgtct
cgactgctcccactattccttcagtgggtctctcacgactgagttgtttt
ctcaaaagtctgtcttactgctgttctatgctggctgaaccatgacaaga
cacttataaaa
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
ggaaattggacataatactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagaagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctctacagaa
tggagtactactcagctattaaaaagaatgaatttatgaaattcctagcc
aaatggatggacgtggagggcatcatcctgagtgaggtaacacattcaca
aaggaactcacacaatatgtactcactgataagtggatattagcccaaaa
cctaggatacctaagatataagatacaatttcctaaacacatgaaactca
aggagaatgaagactgaagtgtggacactatgcccctccttagaagtggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaacgctgacacattgcatacactatcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgcctgggcctagcaaa
cacagaagtgatgctcacagtcagctaatggatggatcacagggctccca
atgagagtagaagaagtacccaaggagctaaagggatctgcaccctaagg
tggaactacagtattatgactaaccagcactccggagctctgactctgct
gctttgttcaagaaggcctagtggctacctgaagaaggtccattgacacg
caatcttatgccagttaggggatagtgcaggccaaggggaagtggtgtag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_113382417_113383504
seq2: B6Ng01-031F20.b_46_1106 (reverse)

seq1  TTTTATAAGTTGTCTTGGTCATGGTGTTTCAGCACAGCAATAGAACAGCA  50
      ||||||||| |||||| |||||||   |||||| |||| |||||||||||
seq2  TTTTATAAG-TGTCTT-GTCATGG---TTCAGC-CAGC-ATAGAACAGCA  43

seq1  GCTAAGACACAGACTGTCTGAGAAAACAACTCCAGGTTCGTGGAGAGACC  100
      | ||||  ||||||| | ||||||||||||| |||  |||| ||||||||
seq2  G-TAAG--ACAGACT-TTTGAGAAAACAACT-CAG--TCGT-GAGAGACC  85

seq1  CCCACCTGGAAGGAATAGGTGGGAGCAGTCGAGGACACCCAGTGCTCTCT  150
      | |     ||||||||| |||||||||||||| |||| |||||| |||||
seq2  CAC----TGAAGGAATA-GTGGGAGCAGTCGA-GACAACCAGTG-TCTCT  128

seq1  TCTGATCGCCACATGTGCCTCTCAAGATTGTTAAGATTTTTAAAGGGCTA  200
      |||||||| |||||||||||||||||| |||||||| |||||||||||||
seq2  TCTGATCG-CACATGTGCCTCTCAAGA-TGTTAAGA-TTTTAAAGGGCTA  175

seq1  TAAAGGTGAAATATTTACTGAATTGAATAAGCTTTTTAGGATACACACAC  250
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TAAAGGTGAAATA-TTACTGAATTGAATAAGC-TTTTAGGATACACACAC  223

seq1  ACACACAACATTAAGAGTAGAGTAGACATATAATCTATCTATCTGTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAACATTAAGAGTAGAGTAGACATATAATCTATCTATCTGTGGAT  273

seq1  GGATATCTACCTACCTGTGGATACCTACTGGTAGGGAAGAAGGGAAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCTACCTACCTGTGGATACCTACTGGTAGGGAAGAAGGGAAATAC  323

seq1  AGGGGTATGATGGCATGGGGGTGTATTATGGAGTCTAATATAAGCAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTATGATGGCATGGGGGTGTATTATGGAGTCTAATATAAGCAAATT  373

seq1  ACAATCGTAAGTATATATAAAAATTCATAATGAAACTACCATTTGTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCGTAAGTATATATAAAAATTCATAATGAAACTACCATTTGTATGT  423

seq1  TAACCAAGAAAATAAAAGGATGAAGCACTATTAGTAATACTTAGCACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGAAAATAAAAGGATGAAGCACTATTAGTAATACTTAGCACCTG  473

seq1  AAATGGCTCACCATTTATTGAGGAGGTAATGGCAAATCCACACAATTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCTCACCATTTATTGAGGAGGTAATGGCAAATCCACACAATTAAA  523

seq1  TACCAATTACTAATTATTAATGGTTATTTTAAGAAATACTACAAATAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATTACTAATTATTAATGGTTATTTTAAGAAATACTACAAATAATG  573

seq1  TTTCACTTATATTATAATAATATCCCACAGATATATTCACTAGAATGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTATATTATAATAATATCCCACAGATATATTCACTAGAATGAAG  623

seq1  AGGCATCCTTGCTGTGCACTGTACAGCATACATTTATTAGTGAAAATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCCTTGCTGTGCACTGTACAGCATACATTTATTAGTGAAAATTAA  673

seq1  GAGATGTAGTAGAGTTCACTTTCACTTTTTACACACTCTTAAAATCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTAGTAGAGTTCACTTTCACTTTTTACACACTCTTAAAATCTTGA  723

seq1  GAGTTCTTCTTACCGGTTGGGACATTTTCTGGATATATGCCCAGGAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTTCTTACCGGTTGGGACATTTTCTGGATATATGCCCAGGAGAGG  773

seq1  TATTGTGGGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACCGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACCGCC  823

seq1  AGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCTACCAACAATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCTACCAACAATGG  873

seq1  AGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTTACCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTTACCTGA  923

seq1  ATTTTTTATCTTAGCCATTCTGACTGGTGTGAGATGGAATCTCAGCATTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTATCTTAGCCATTCTGACTGGTGTGAGATGGAATCTCAGCATTG  973

seq1  TTTTGATTTGCATTTCTCTGATGATTGAGGATGTTGAACATTTTTTCAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTGCATTTCTCTGATGATTGAGGATGTTGAACATTTTTTCAGG  1023

seq1  TGCTTCTCAGCCATTCCGTATTCCTCGGGTGAGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCAGCCATTCCGTATTCCTCGGGTGAGAATTC  1061