BAC Information

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BAC

Clone NameB6Ng01-033B18
Chromosome9 (Build37)
Map Location 17,132,623 - 17,133,615
singlet/doubletsinglet
Overlap genenone
Upstream geneFat3, EG434373, LOC100040074
Downstream geneLOC100040090, LOC244710, LOC100040508, EG665548, LOC665554, LOC665567, Chordc1, Naalad2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033B18.bB6Ng01-033B18.g
ACCDH862254DH862255
length1,160986
definitionDH862254|Mus musculus domesticus DNA, BAC clone: B6Ng01-033B18, 5' end.DH862255|Mus musculus domesticus DNA, BAC clone: B6Ng01-033B18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacaaaggaatttcaaatgacagaaaaacaattaagaatatt
caatattcgtagtcatcagtgaagtccaaatcaaaataactctgagattc
catcgtaaatctgtcagaatggctaatatcaaaagtacaagtgagatatc
attctgaaaaggatgtgaaacatccttcattgatgttgggggtacaaact
tgtatacccagtatagaagtcaatattgtggtttcccagaaaactgggaa
tggatctacctcaagatccaattatacaactcgggcacctgaagtatatt
ccatcctatcacaaggacacttctttggatatattcatagcagttttctt
tataagaaccctaaactgaaacagtttagatgtctctagatgagcatagc
agtggaagatatagagcacaaactggccatcttctataaaaaggcaaggt
tcctaccaatgggacttgagcatcaactcatgcacaaaaccatagagcta
taacctgccctgcctgcaaggagtactagcataatggtgatgcagaactt
gtgggcatggcaaagtagtgactggtttaacttaaggtccatgatacaag
agggagccatacataatactgccttaaattgccaggaatcaggggtaaga
caactctgagtcccaggatataactaagtacaactagaaataaaataata
attgattcttaatatttttctgctgtagtcataaactagtacctagacaa
attgtcatcaaagaagcatgattcaaccactgaaggaaaaaaattcagag
accaacaggcatgcactagggatagccagggtaatcccacagaacagggg
aatgaagaactgtaggagccatatgggtcaataatatgactgaagctaca
aacagacagtttaggtctgagctggatcctttgcatatacatttttgtag
cttgatgttcttgtgggactcctaacagtggtagtacatgctgtctctgc
ctcttatgcctgggctagaaacccttttctctactgggttgctaatcagt
ctgatgtaaggttatgctgtctttcataactgtaatgtcacgtcaaatga
atccctgggaggcctctcctgtttttgaaggaaatggaaaggggaaagag
gggaggtgga
gaattcctgtccctgagttcaaggagaagcttagctatcatatcttcaaa
gctctgctcataattgcttcagtggtgacttaaaaaacactagaaagcaa
gaaggacaaaatctccatgaaattttgcactgagagaagcaaatctcggg
taagacacttatagacaatctagaaacactggtgaatttagagaattgta
gagcatataattagtgaattctgtttttctgaacacgacatatcctgtcc
ttaatattgaaaaatggaaaatgtgatgaagtgtttgatggtcacatagt
gatcattgtaataagcaccatgaacaaatgggcttaataacaatgttaag
aaaaacactataagctagctttcaggttactcttctctgttgctaataac
agataccccaaaacagagccccagtctagctgacattttttttaagtatg
tttggctcttagtcataagtgtgtgaggttgaggtcctataactcttgat
ggctttcttactagcagagtctcaagcaagcacatggcattgtgtgtcat
gagccaagaaaaccatgcatctgtgtgtcccattacctctaagtttttca
taatcccaccaagattcacttattggatctcctctttaccaccacccaaa
gtcctaattatagattcaatgttctgattaaatttcagccttcttcatat
gtcataaagcttattaaatttctttatgtgaaatgttatacaaataccat
ggaaggtatgacatatatgaaatcaataaagagtatccataattgaagaa
agaggtatgttatgcagtaaaaatattccaatcaagacaataagatttaa
agacagactaaagtaaaatgtatgttgtgaacaataattaaagagatgtg
cactgagaagcacgggggtatacatataaaaataagaaagagtagaacta
caagaactggaaaacacaaagggtgtgtgttgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_17132623_17133615
seq2: B6Ng01-033B18.g_66_1051

seq1  GAATTCCTGTCCCTGAGTTCAAGGAGAAGCTTAGCTATCATATCTTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCCCTGAGTTCAAGGAGAAGCTTAGCTATCATATCTTCAAA  50

seq1  GCTCTGCTCATAATTGCTTCAGTGGTGACTTAAAAAACACTAGAAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTCATAATTGCTTCAGTGGTGACTTAAAAAACACTAGAAAGCAA  100

seq1  GAAGGACAAAATCTCCATGAAATTTTGCACTGAGAGAAGCAAATCTCGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACAAAATCTCCATGAAATTTTGCACTGAGAGAAGCAAATCTCGGG  150

seq1  TAAGACACTTATAGACAATCTAGAAACACTGGTGAATTTAGAGAATTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACACTTATAGACAATCTAGAAACACTGGTGAATTTAGAGAATTGTA  200

seq1  GAGCATATAATTAGTGAATTCTGTTTTTCTGAACACGACATATCCTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATATAATTAGTGAATTCTGTTTTTCTGAACACGACATATCCTGTCC  250

seq1  TTAATATTGAAAAATGGAAAATGTGATGAAGTGTTTGATGGTCACATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTGAAAAATGGAAAATGTGATGAAGTGTTTGATGGTCACATAGT  300

seq1  GATCATTGTAATAAGCACCATGAACAAATGGGCTTAATAACAATGTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTGTAATAAGCACCATGAACAAATGGGCTTAATAACAATGTTAAG  350

seq1  AAAAACACTATAAGCTAGCTTTCAGGTTACTCTTCTCTGTTGCTAATAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACTATAAGCTAGCTTTCAGGTTACTCTTCTCTGTTGCTAATAAC  400

seq1  AGATACCCCAAAACAGAGCCCCAGTCTAGCTGACATTTTTTTTAAGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCCCAAAACAGAGCCCCAGTCTAGCTGACATTTTTTTTAAGTATG  450

seq1  TTTGGCTCTTAGTCATAAGTGTGTGAGGTTGAGGTCCTATAACTCTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTCTTAGTCATAAGTGTGTGAGGTTGAGGTCCTATAACTCTTGAT  500

seq1  GGCTTTCTTACTAGCAGAGTCTCAAGCAAGCACATGGCATTGTGTGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCTTACTAGCAGAGTCTCAAGCAAGCACATGGCATTGTGTGTCAT  550

seq1  GAGCCAAGAAAACCATGCATCTGTGTGTCCCATTACCTCTAAGTTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAGAAAACCATGCATCTGTGTGTCCCATTACCTCTAAGTTTTTCA  600

seq1  TAATCCCACCAAGATTCACTTATTGGATCTCCTCTTTACCACCACCCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCACCAAGATTCACTTATTGGATCTCCTCTTTACCACCACCCAAA  650

seq1  GTCCTAATTATAGATTCAATGTTCTGATTAAATTTCAGCCTTCTTCATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAATTATAGATTCAATGTTCTGATTAAATTTCAGCCTTCTTCATAT  700

seq1  GTCATAAAGCTTATTAAATTTCTTTATGTGAAATGTTATACAAATACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAAGCTTATTAAATTTCTTTATGTGAAATGTTATACAAATACCAT  750

seq1  GGAAGGTATGACATATATGAAATCAATAAAGAGTATCCATAATTGAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTATGACATATATGAAATCAATAAAGAGTATCCATAATTGAAGAA  800

seq1  AGAGGTATGTTATGCAGTAAAAATATTCCAATCAAGACAATAAGATTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATGTTATGCAGTAAAAATATTCCAATCAAGACAATAAGATTTAA  850

seq1  AGACAGACTAAAGTAAAATGTATGTTGTGAACAATAAATTAAAGAGATGT  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGACAGACTAAAGTAAAATGTATGTTGTGAACAAT-AATTAAAGAGATGT  899

seq1  GCACTGAGAAGCACGGGGGTATACAATATTAAAAATAAGAAAGAGTAGAA  950
      |||||||||||||||||||||||| ||| |||||||||||||||||||||
seq2  GCACTGAGAAGCACGGGGGTATAC-ATA-TAAAAATAAGAAAGAGTAGAA  947

seq1  CTTACAAAGAACTGGAAAACACAAAGGTGTGTGTGTATGTGTG  993
      | ||| ||||||||||||||||||||| |||||||| ||||||
seq2  C-TAC-AAGAACTGGAAAACACAAAGG-GTGTGTGT-TGTGTG  986