BAC Information

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BAC

Clone NameB6Ng01-034L02
Chromosome9 (Build37)
Map Location 30,824,589 - 30,825,282
singlet/doubletsinglet
Overlap genenone
Upstream geneSnx19, LOC666478, Adamts15, Adamts8
Downstream geneZbtb44, BC038156, St14, Aplp2, EG638580, EG666539, Prdm10, Nfrkb, Tmem45b, LOC666558, EG666576, Barx2, LOC100042266, Tpi-rs4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L02.bB6Ng01-034L02.g
ACCDH863369DH863370
length694894
definitionDH863369|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L02, 5' end.DH863370|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacagggaaagaacctggagggttgatgcagaagccgtgggag
gtgctgctcactgacttgtttctcatggcttgctcagcctgctttcttat
agaactcagggatggcctcacccacagtggctttggccttcccacatcaa
tcattaatcaagaaaatgctctatagatttgcctacaggcctattttagg
gagccattttctcagtcaaagctccctgctcccaaataattttagcttgt
ctcaagttggcataaaactaggcagcacagcgccttctacttactctggg
tattcactccctgggtagaatgacacacttttcttctctcaagaccttct
gactctaatggatgaactgtgtgtatattgcacacacttcttgagtataa
caaatataaaataacagaagacaactagaatattcattcttttaaaaaaa
ttgttccagtgtttggaacaaactcagactttatacatgatgttaggcaa
gtactctaccaaccaactaccatagctcaggtagactgctcacctagaat
gcatcaagctttggcctccaactccagcaccgtacaaactggggatagtg
gtacatgcttagaatctctgcactaaccgggcagtggtggcgtatgcctt
ttttgtttgtttgtttggttttttttgtttgttttgttttgttt
gaattcagtcacgaaagattagctgatcttgttattgaagacttgaacat
ctctccatgagaaataggcagattcaggacatagaaaaatcagtgggaca
cggttgacttcagtagccccagcagtcaatgggatgtaactgtcatctat
gggatagtgagatgcaaactcttcaaatacacggagcattcaatgaggta
gatcaccttctgagtcataaaacaaacctttaaggtttaaaagaacagtc
ttcacaaacctaaagaaacagaccttaatggtgtgctttcagtccaaggt
ggaatcaaacagaaaaggagctggcaattctcaagctacttaggaatcgg
acaataacgtgtgggccaaagaagaaatctcaaaagaacattcagaatat
cttgaaataaattaaaatgaaaatgcaacttaccaaaactcgtgggagtt
gatgaaatctgctcttaggtgggacttcacaacatttaacaaaacaccat
aagagccaaaaggggtagataactcagagaaggagtacctcccagacaca
acagggctgatgtgcatatgaactcacagagactgtggcaacatgcacag
ggtctgcgcaggtccaagccagacagggtcccaggactaagaggaagtga
acgcaagctcccacttgagagttgcttgccaaggaaaaatcagttttctc
caatgaagaaccttatgggcaagccccatgtcctgcagtaaacagccgcc
acaaaatgcgctcaaggccatttggggaggttgctttggtttcagcctca
ttttgctttatttggctttttattttaaaccttactgtcttttattttta
tgtgtatttatttgtagatttatagtattaatgggggttttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_30824589_30825282
seq2: B6Ng01-034L02.b_41_734 (reverse)

seq1  AAACAAAACAAAACAAACAAAAAAAACCAAACAAACAAACAAAAAAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAACAAAAAAAACCAAACAAACAAACAAAAAAGGCA  50

seq1  TACGCCACCACTGCCCGGTTAGTGCAGAGATTCTAAGCATGTACCACTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCCACCACTGCCCGGTTAGTGCAGAGATTCTAAGCATGTACCACTAT  100

seq1  CCCCAGTTTGTACGGTGCTGGAGTTGGAGGCCAAAGCTTGATGCATTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTTTGTACGGTGCTGGAGTTGGAGGCCAAAGCTTGATGCATTCTA  150

seq1  GGTGAGCAGTCTACCTGAGCTATGGTAGTTGGTTGGTAGAGTACTTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGCAGTCTACCTGAGCTATGGTAGTTGGTTGGTAGAGTACTTGCCT  200

seq1  AACATCATGTATAAAGTCTGAGTTTGTTCCAAACACTGGAACAATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATGTATAAAGTCTGAGTTTGTTCCAAACACTGGAACAATTTTTT  250

seq1  TAAAAGAATGAATATTCTAGTTGTCTTCTGTTATTTTATATTTGTTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAATGAATATTCTAGTTGTCTTCTGTTATTTTATATTTGTTATAC  300

seq1  TCAAGAAGTGTGTGCAATATACACACAGTTCATCCATTAGAGTCAGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGTGTGTGCAATATACACACAGTTCATCCATTAGAGTCAGAAGG  350

seq1  TCTTGAGAGAAGAAAAGTGTGTCATTCTACCCAGGGAGTGAATACCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGAGAAGAAAAGTGTGTCATTCTACCCAGGGAGTGAATACCCAGA  400

seq1  GTAAGTAGAAGGCGCTGTGCTGCCTAGTTTTATGCCAACTTGAGACAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTAGAAGGCGCTGTGCTGCCTAGTTTTATGCCAACTTGAGACAAGC  450

seq1  TAAAATTATTTGGGAGCAGGGAGCTTTGACTGAGAAAATGGCTCCCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATTTGGGAGCAGGGAGCTTTGACTGAGAAAATGGCTCCCTAAA  500

seq1  ATAGGCCTGTAGGCAAATCTATAGAGCATTTTCTTGATTAATGATTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCCTGTAGGCAAATCTATAGAGCATTTTCTTGATTAATGATTGATG  550

seq1  TGGGAAGGCCAAAGCCACTGTGGGTGAGGCCATCCCTGAGTTCTATAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGCCAAAGCCACTGTGGGTGAGGCCATCCCTGAGTTCTATAAGA  600

seq1  AAGCAGGCTGAGCAAGCCATGAGAAACAAGTCAGTGAGCAGCACCTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCTGAGCAAGCCATGAGAAACAAGTCAGTGAGCAGCACCTCCCA  650

seq1  CGGCTTCTGCATCAACCCTCCAGGTTCTTTCCCTGTTTGAATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTCTGCATCAACCCTCCAGGTTCTTTCCCTGTTTGAATTC  694