BAC Information

Click to search

BAC

Clone NameB6Ng01-037I19
Chromosome9 (Build37)
Map Location 81,031,140 - 81,032,117
singlet/doubletsinglet
Overlap genenone
Upstream geneMyo6, Impg1, EG666534
Downstream geneLOC100039038, Htr1b, LOC671392, 4930486G11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037I19.bB6Ng01-037I19.g
ACCDH865381DH865382
length1,009971
definitionDH865381|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I19, 5' end.DH865382|Mus musculus domesticus DNA, BAC clone: B6Ng01-037I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcttcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgcctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactactccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattgggcatagtactaccggaggatctagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctctactat
gttcacagcagccttatttataatagccagaagctggaaagaatccagat
gcctctcaacagaggaatggatacagaaaatggggtacagctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtaccattttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctctttagaattggga
aacaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaaggctgacaccattgcatatactagcaagattttatcga
aaggacccagatgtagctttctctgtgagactatgccggggtctagcaaa
cactgaaggtgattgcttcaccatccgctatggatggatcacgggcttcc
caatggaaggagctagagaaagtacccaatggagctaaagggatcctcaa
ccctttagg
gaattctaagtggacccaaagttaatttattcatctccaggaagtgtggt
caaaggcaaaaaacaaaaattaaaaaaaaaaacattttaaaaagccagac
tatattggaggaaggggagatgatggatgtcaaagccaagagcagcaatg
gagttaagaggttgagagaaagctagaaacgatgtcaggcatggaaaaac
tgaagataagttcctgggggcagaagtaaagttactttgaataatctact
gtgagaaacctaatgagtttcccatgtggtcatgtcagtaaggcatgagt
gacttggagttcatagaaagggctggatctgggcttcactttcaaacctc
aaacacatcaatgctataggaattctgggcatcaccaggaagagataaaa
acatgggaagaaagccaaacactaaagacagcaaagaacaaggacaaacc
agaaatctcttttcaactgaaaatcagtgtcacactgcttagagaaacaa
atggaatcttgtatgccagtttatgacagtggaacctgtgcttgtaaagg
ctataggctaatggatatatctaattatgaaactttcttaacaaagtcta
gtgtaatagttgtctttgaaactacattttctgttttgattctttttgat
tttctagtacaggagaggtcttcatgcagtgcagacaatgaggtactttt
ggagtattttcagaatgctgactctgaactttgcgtgtagcttgctctat
tctttgggaatctttagaagtaccatataaacatttaaaaaggagaggtt
actattgttttttcctttgatttatatgaggaagaaatcctaaattttaa
agatattctatatatatttttgccttaatcaactggaatacggtttcatc
accttcagctgctcagtcttagtccctttccaagggtgcatctaaggaac
agggattttacatttattatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_81031140_81032117
seq2: B6Ng01-037I19.g_69_1039 (reverse)

seq1  AATAAT-AATGTAAAATCCATGTTACTTTAGATGTCACCTTAGAAAAGGA  49
      |||||| |||||||||||| |||| | |||||||   |||| |||| |||
seq2  AATAATAAATGTAAAATCCCTGTT-CCTTAGATGCACCCTTGGAAAGGGA  49

seq1  CTTAAGACTGAAGCAGCTTGAAGGTGATTGAAACCGTTATTCCAGTTGAT  99
      | |||||||| |||||| ||||||||| |||||||| |||||||||||||
seq2  C-TAAGACTG-AGCAGC-TGAAGGTGA-TGAAACCG-TATTCCAGTTGAT  94

seq1  TTAAAGGC-AAAATATATATAGAATATCTTTAAAATTTTAGGATTTTCTT  148
      |  ||||| |||||||||||||||||||||||||| ||||||| ||||||
seq2  T--AAGGCAAAAATATATATAGAATATCTTTAAAA-TTTAGGA-TTTCTT  140

seq1  CCTCATATAAATCAAA-GAAAACACAATAGTAACCTTCTCCTTTTTAAAT  197
      |||||||||||||||| ||||| |||||||||||| ||||||||||||||
seq2  CCTCATATAAATCAAAGGAAAAAACAATAGTAACC-TCTCCTTTTTAAAT  189

seq1  GTTTATATGGTACTTCTAAAGAATTCCAAAGAATAGAGCAAGCTACACGC  247
      |||||||||||||||||||||| | |||||||||||||||||||||||||
seq2  GTTTATATGGTACTTCTAAAGATTCCCAAAGAATAGAGCAAGCTACACGC  239

seq1  AAAGTTCAGAGTCAGCATTCTGAAAATACTCC-AAAGTACCTCATTGTCT  296
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGTTCAGAGTCAGCATTCTGAAAATACTCCAAAAGTACCTCATTGTCT  289

seq1  GCACTGCATGAAGACCTCTCCTGTACTAGAAAATCAAAAAGAATCAAAAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCATGAAGACCTCTCCTGTACTAGAAAATCAAAAAGAATCAAAAC  339

seq1  AGAAAATGTAGTTTCAAAGACAACTATTACACTAGACTTTGTTAAGAAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTAGTTTCAAAGACAACTATTACACTAGACTTTGTTAAGAAAG  389

seq1  TTTCATAATTAGATATATCCATTAGCCTATAGCCTTTACAAGCACAGGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAATTAGATATATCCATTAGCCTATAGCCTTTACAAGCACAGGTT  439

seq1  CCACTGTCATAAACTGGCATACAAGATTCCATTTGTTTCTCTAAGCAGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCATAAACTGGCATACAAGATTCCATTTGTTTCTCTAAGCAGTG  489

seq1  TGACACTGATTTTCAGTTGAAAAGAGATTTCTGGTTTGTCCTTGTTCTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTGATTTTCAGTTGAAAAGAGATTTCTGGTTTGTCCTTGTTCTTT  539

seq1  GCTGTCTTTAGTGTTTGGCTTTCTTCCCATGTTTTTATCTCTTCCTGGTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTTAGTGTTTGGCTTTCTTCCCATGTTTTTATCTCTTCCTGGTG  589

seq1  ATGCCCAGAATTCCTATAGCATTGATGTGTTTGAGGTTTGAAAGTGAAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCAGAATTCCTATAGCATTGATGTGTTTGAGGTTTGAAAGTGAAGC  639

seq1  CCAGATCCAGCCCTTTCTATGAACTCCAAGTCACTCATGCCTTACTGACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCCAGCCCTTTCTATGAACTCCAAGTCACTCATGCCTTACTGACA  689

seq1  TGACCACATGGGAAACTCATTAGGTTTCTCACAGTAGATTATTCAAAGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACATGGGAAACTCATTAGGTTTCTCACAGTAGATTATTCAAAGTA  739

seq1  ACTTTACTTCTGCCCCCAGGAACTTATCTTCAGTTTTTCCATGCCTGACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTTCTGCCCCCAGGAACTTATCTTCAGTTTTTCCATGCCTGACA  789

seq1  TCGTTTCTAGCTTTCTCTCAACCTCTTAACTCCATTGCTGCTCTTGGCTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTCTAGCTTTCTCTCAACCTCTTAACTCCATTGCTGCTCTTGGCTT  839

seq1  TGACATCCATCATCTCCCCTTCCTCCAATATAGTCTGGCTTTTTAAAATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCCATCATCTCCCCTTCCTCCAATATAGTCTGGCTTTTTAAAATG  889

seq1  TTTTTTTTTTTAATTTTTGTTTTTTGCCTTTGACCACACTTCCTGGAGAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAATTTTTGTTTTTTGCCTTTGACCACACTTCCTGGAGAT  939

seq1  GAATAAATTAACTTTGGGTCCACTTAGAATTC  978
      ||||||||||||||||||||||||||||||||
seq2  GAATAAATTAACTTTGGGTCCACTTAGAATTC  971