BAC Information

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BAC

Clone NameB6Ng01-048G09
Chromosome9 (Build37)
Map Location 31,654,588 - 31,806,330
singlet/doubletdoublet
Overlap geneBarx2, LOC100042266, Tpi-rs4
Upstream geneAdamts15, Adamts8, Zbtb44, BC038156, St14, Aplp2, EG638580, EG666539, Prdm10, Nfrkb, Tmem45b, LOC666558, EG666576
Downstream geneLOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1, LOC669759, LOC100041398, Ets1, LOC100041426
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048G09.bB6Ng01-048G09.g
ACCDH872969DH872970
length98274
definitionDH872969|Mus musculus domesticus DNA, BAC clone: B6Ng01-048G09, 5' end.DH872970|Mus musculus domesticus DNA, BAC clone: B6Ng01-048G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,805,345 - 31,806,330)(31,654,588 - 31,654,661)
sequence
gaattcctgtcctgacatccttagatgatgaacagtgatgtgggagtgta
agccaaacaaacccttttctccccagattcatttaatcacagtatttcat
cacagcaatagcaactgagacacattgtaatttatgcccaaattgcctaa
ttggagccaggtaagtaactgtactctcagctgctcttgagactaaacca
ggagtatcccttgagcctgggatttaaggctagcctggtctacagagtga
gttccagaacagccaagactacacagagaaaccctgtcttgaaaatcaaa
agaaaaagtgtttaaacatttatattctagaatttaggtttaattgatct
ttaccaaactcctttgtgccattaatggtacaaacccttggcaccatgaa
tatattaacacactttgattcccaggggcagtggcttcacccttagtaat
aatggtcctggcatgtctggatgagggtgaagggaaacatacagattatc
tctagaaactcaaaaactcaaaaagtatataaacctgtccaagagtcatt
aacacagcttgagagtccatagctgggcagacagtagcaaagatggcagc
tgagagaaagaaacagattacagcaggggagtcgtgaggctgaggtttcc
tggacgcacgggagagtggggaaggttacagagaagggaaggctgcaacg
cagagaggtggtgggggcaggaacagcctgctgtctgaaataacacagac
agtgtgagtcagcccatgacatcctttacatcagtaaggacgggtgtggc
cggccgtcctcctgctcacaggtaaccaaagggcacaggagcttggaaaa
ggcggcagcctccgtggcagggatgcagcacagtgcttgacaccgtgggc
tattccagcgcagactagcagacagcaggcctctgtctggtggatatctg
ctgtgaaagagggaagtagctcggagctattt
ttcttagggcgccccttaggttttgtgggtgcttcctgtccacctttaag
gacctatgtgggggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_31805345_31806330
seq2: B6Ng01-048G09.b_44_1025 (reverse)

seq1  AAATAGCTCCGAGCTTACTTCCCTCCTTTCCAGCCTGTAGTCCCCCAGAC  50
      |||||||||||||| |||||||||| ||  ||||   || ||| ||||||
seq2  AAATAGCTCCGAGC-TACTTCCCTCTTTCACAGCAGATA-TCCACCAGAC  48

seq1  AGAGGCCCTGCTGTCTGCTAGTCTGCGCTGGAATTAGCCCACGGTGTC-A  99
      ||||| ||||||||||||||||||||||||||| |||||||||||||| |
seq2  AGAGG-CCTGCTGTCTGCTAGTCTGCGCTGGAA-TAGCCCACGGTGTCAA  96

seq1  GCACTGTGCTGCATCCCTGCCACCGGAGGCTGCCGCCTTTTCCAAGCTCC  149
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCACTGTGCTGCATCCCTGCCA-CGGAGGCTGCCGCCTTTTCCAAGCTCC  145

seq1  TGTGCCCTTTGGTTACCTGTGAGCAGGAGGACGGCCGGCCACACCCGTCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCTTTGGTTACCTGTGAGCAGGAGGACGGCCGGCCACACCCGTCC  195

seq1  TTACTGATGTAAAGGATGTCATGGGCTGACTCACACTGTCTGTGTTATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGATGTAAAGGATGTCATGGGCTGACTCACACTGTCTGTGTTATTT  245

seq1  CAGACAGCAGGCTGTTCCTGCCCCCACCACCTCTCTGCGTTGCAGCCTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGCAGGCTGTTCCTGCCCCCACCACCTCTCTGCGTTGCAGCCTTC  295

seq1  CCTTCTCTGTAACCTTCCCCACTCTCCCGTGCGTCCAGGAAACCTCAGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCTGTAACCTTCCCCACTCTCCCGTGCGTCCAGGAAACCTCAGCC  345

seq1  TCACGACTCCCCTGCTGTAATCTGTTTCTTTCTCTCAGCTGCCATCTTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGACTCCCCTGCTGTAATCTGTTTCTTTCTCTCAGCTGCCATCTTTG  395

seq1  CTACTGTCTGCCCAGCTATGGACTCTCAAGCTGTGTTAATGACTCTTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTCTGCCCAGCTATGGACTCTCAAGCTGTGTTAATGACTCTTGGA  445

seq1  CAGGTTTATATACTTTTTGAGTTTTTGAGTTTCTAGAGATAATCTGTATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTATATACTTTTTGAGTTTTTGAGTTTCTAGAGATAATCTGTATG  495

seq1  TTTCCCTTCACCCTCATCCAGACATGCCAGGACCATTATTACTAAGGGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCACCCTCATCCAGACATGCCAGGACCATTATTACTAAGGGTG  545

seq1  AAGCCACTGCCCCTGGGAATCAAAGTGTGTTAATATATTCATGGTGCCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTGCCCCTGGGAATCAAAGTGTGTTAATATATTCATGGTGCCAA  595

seq1  GGGTTTGTACCATTAATGGCACAAAGGAGTTTGGTAAAGATCAATTAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTACCATTAATGGCACAAAGGAGTTTGGTAAAGATCAATTAAAC  645

seq1  CTAAATTCTAGAATATAAATGTTTAAACACTTTTTCTTTTGATTTTCAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCTAGAATATAAATGTTTAAACACTTTTTCTTTTGATTTTCAAG  695

seq1  ACAGGGTTTCTCTGTGTAGTCTTGGCTGTTCTGGAACTCACTCTGTAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTCTCTGTGTAGTCTTGGCTGTTCTGGAACTCACTCTGTAGAC  745

seq1  CAGGCTAGCCTTAAATCCCAGGCTCAAGGGATACTCCTGGTTTAGTCTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAGCCTTAAATCCCAGGCTCAAGGGATACTCCTGGTTTAGTCTCA  795

seq1  AGAGCAGCTGAGAGTACAGTTACTTACCTGGCTCCAATTAGGCAATTTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCTGAGAGTACAGTTACTTACCTGGCTCCAATTAGGCAATTTGG  845

seq1  GCATAAATTACAATGTGTCTCAGTTGCTATTGCTGTGATGAAATACTGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAATTACAATGTGTCTCAGTTGCTATTGCTGTGATGAAATACTGTG  895

seq1  ATTAAATGAATCTGGGGAGAAAAGGGTTTGTTTGGCTTACACTCCCACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGAATCTGGGGAGAAAAGGGTTTGTTTGGCTTACACTCCCACAT  945

seq1  CACTGTTCATCATCTAAGGATGTCAGGACAGGAATTC  986
      |||||||||||||||||||||||||||||||||||||
seq2  CACTGTTCATCATCTAAGGATGTCAGGACAGGAATTC  982

seq1: chr9_31654588_31654661
seq2: B6Ng01-048G09.g_73_146

seq1  TTCTTAGGGCGCCCCTTAGGTTTTGTGGGTGCTTCCTGTCCACCTTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGGGCGCCCCTTAGGTTTTGTGGGTGCTTCCTGTCCACCTTTAAG  50

seq1  GACCTATGTGGGGGGGGGGGGGGA  74
      ||||||||||||||||||||||||
seq2  GACCTATGTGGGGGGGGGGGGGGA  74