BAC Information

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BAC

Clone NameB6Ng01-056M04
Chromosome9 (Build37)
Map Location 51,519,316 - 51,519,865
singlet/doubletsinglet
Overlap genenone
Upstream geneDixdc1, 2310030G06Rik, Hspb2, Cryab, 1110032A03Rik, D630004A14Rik, Alg9, Ppp2r1b, Snf1lk2, Layn, 4833427G06Rik, Btg4, LOC100042825, Pou2af1, Gm684, 1810046K07Rik, LOC100042854, LOC640374, LOC668070
Downstream geneArhgap20, LOC629554, LOC100043409, Fdx1, EG629557, Rdx, 9830163H01Rik, Zc3h12c, LOC100042876, AI593442, Gm1715
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056M04.b
ACCDH878822
length937
definitionDH878822|Mus musculus domesticus DNA, BAC clone: B6Ng01-056M04, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaaaaatgcaaagaaaaagtaagctgaaagctaaaactataac
atttgtggaaaagtgcatcagtggagggccccaggagatggttcagttgg
tacagtgcttgcctcatggctgtgaggatctgttcaccagtacccatgtg
actgagccaggcttggtggtatggcttacactcttagtgctgggcagaaa
gaggaggagccctggggctcggtgagcagttagtctgccttgtcagtagg
ctctagatgcagtgagatcttgtctcctaaaatatggagagggactaaag
aagacacacacacacacacacacacacacacacacacacacacacacaca
cagagagagagagagagagagagagagagagagagagagagagagagaga
gagaacagaggaaaaagacacatgacactggttttagtaatgacacttct
tggtgataacactaagagcttaatcaactaaagagaaaaatagaataatt
agagtacatccaaagaaaaccctccaaggatcaattgatgtaattaatgg
aatgaaacggcattccataggaaggtggaaatatttatatgtcatgagac
ccataagagttactatccagttattttagttgttaaaggtggcattctgt
tcttgtggctgtcttcttttaggtttgttgagggattaccttcttgtttt
ttctagggcgttgttcccgttcttgtattggtttttttctgttattatcc
tttgaagggctggattcgtggagagataatgcgtgaatttggttttgtcg
tggaatactttggtttctccctctatgataattgagagtttggctgggta
tagtagcctgggctgcagtttgtgttctcttagtgtctgtataacatctg
tccaggctcttctggctttcatagtctctggtgaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_51519316_51519865
seq2: B6Ng01-056M04.b_45_594 (reverse)

seq1  CCATTAATTACATCAATTGATCCTTGGAGGGTTTTCTTTGGATGTACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAATTACATCAATTGATCCTTGGAGGGTTTTCTTTGGATGTACTCT  50

seq1  AATTATTCTATTTTTCTCTTTAGTTGATTAAGCTCTTAGTGTTATCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCTATTTTTCTCTTTAGTTGATTAAGCTCTTAGTGTTATCACCA  100

seq1  AGAAGTGTCATTACTAAAACCAGTGTCATGTGTCTTTTTCCTCTGTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTCATTACTAAAACCAGTGTCATGTGTCTTTTTCCTCTGTTCTC  150

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG  200

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTT  250

seq1  CTTTAGTCCCTCTCCATATTTTAGGAGACAAGATCTCACTGCATCTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTCCCTCTCCATATTTTAGGAGACAAGATCTCACTGCATCTAGAG  300

seq1  CCTACTGACAAGGCAGACTAACTGCTCACCGAGCCCCAGGGCTCCTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGACAAGGCAGACTAACTGCTCACCGAGCCCCAGGGCTCCTCCTC  350

seq1  TTTCTGCCCAGCACTAAGAGTGTAAGCCATACCACCAAGCCTGGCTCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCCAGCACTAAGAGTGTAAGCCATACCACCAAGCCTGGCTCAGT  400

seq1  CACATGGGTACTGGTGAACAGATCCTCACAGCCATGAGGCAAGCACTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGTACTGGTGAACAGATCCTCACAGCCATGAGGCAAGCACTGTA  450

seq1  CCAACTGAACCATCTCCTGGGGCCCTCCACTGATGCACTTTTCCACAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGAACCATCTCCTGGGGCCCTCCACTGATGCACTTTTCCACAAAT  500

seq1  GTTATAGTTTTAGCTTTCAGCTTACTTTTTCTTTGCATTTTTAAGAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGTTTTAGCTTTCAGCTTACTTTTTCTTTGCATTTTTAAGAATTC  550