BAC Information

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BAC

Clone NameB6Ng01-064L15
Chromosome9 (Build37)
Map Location 78,812,172 - 78,907,618
singlet/doubletdoublet
Overlap genenone
Upstream geneElovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064L15.bB6Ng01-064L15.g
ACCDH884425DH884426
length6591,039
definitionDH884425|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L15, 5' end.DH884426|Mus musculus domesticus DNA, BAC clone: B6Ng01-064L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,906,960 - 78,907,618)(78,812,172 - 78,813,228)
sequence
gaattctttaatatataaaactatgaaagaatttaatgaaaactgtcagc
ctaaggttcacaatactgatattgcctctgaaagctttagtccccctaca
tttttttgtttttacttttatattctgctttctaaatgtgtgtacagaac
attcacattaagttgaagattacaatgtgtaaattccattaggtattctg
agaacttctaatgacattcgctatttatcaaatactcagaacatttttgg
tcttacagctgatgaaatgactcatcttctgtattttcttactcatattc
ccaaggagcaggaaccgagacacttccatctgacattctcagacatgact
atccagtggccatggtagatttttattttagtatacccagaaaaatttgc
agtgaatttagagatgatagagactaaagcctgcaaaacttaaaggcatt
ctcttgctgacatggaagtaaacacttatatttcacactttaaatgtctg
ctctaaaatgctttaaaaaactccaattgtcaaaaatgcagctacaagat
gaaactttcaatccaaaagagactcaaagttaaagctgaggcaaaaattt
tgactaaagtttacaaatgggacaaactaagaaagatgggggaagggagg
agggaggga
gaattctacatatgtttcttaattgatctaacttataattctaaatataa
ttcgatatcagaagagtgtggggtttggagttaatgttgtatctagatct
taaccttcagtccagtgctttagtgaaggtgaaggtcagctctatttaga
tggccttcactttagcttccattctatttctatgattatttaattttatt
tatgtgaaaatgttgaaatatgcatataatgaagtgttagatacccatcc
tgtgttttattttgtaaacttgagcacagtaatattttaagtcataacag
caactcttgggataatatccagggttccatagtttagtgtgctttctact
tagtcatgccttctgtcaatgaggtagcaactgagtgagagtcatattta
ggtaattgttggggggaatggtgatcaagactctaaggatttttacataa
ctagaaatatagactgtgccttccttgtctagacaagtatctaaataaaa
taaagcataatcctgtaaatttcccttctgtccaaatggttgatttttag
aaactcagtgttgcatgggaatgtttgcatttttcagcctcagagcacag
ccatgatttaaaaaaacaaaacaaaaagattcagtggggcagaggaacat
gtggccacgtggcctgtgtgtgagcatcaaacaggaaacacagccatttt
tttaacctaaatctttcacttcccagggtgacttgtttgtattaggtgcc
aagagccctccaagaggtgaaagctgctttcatttttcatttcagattga
agtgcaccccttgatgcagctgcagagctcctccctccccctttctcccc
tcctactctgcatatagtcagaaagggctttaatctcttgaaacaaaggc
ttataaggacgaaatggggtccaggatcctaggtgagcctgaaaacatga
agtgccaagaagccgacaaaccaagggaaaggacttgatttctttctgag
gcttgcatggttaaaagactggtggattcagctggtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_78906960_78907618
seq2: B6Ng01-064L15.b_47_705 (reverse)

seq1  TCCCTCCCTCCTCCCTTCCCCCATCTTTCTTAGTTTGTCCCATTTGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCTCCCTTCCCCCATCTTTCTTAGTTTGTCCCATTTGTAAA  50

seq1  CTTTAGTCAAAATTTTTGCCTCAGCTTTAACTTTGAGTCTCTTTTGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTCAAAATTTTTGCCTCAGCTTTAACTTTGAGTCTCTTTTGGATT  100

seq1  GAAAGTTTCATCTTGTAGCTGCATTTTTGACAATTGGAGTTTTTTAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTCATCTTGTAGCTGCATTTTTGACAATTGGAGTTTTTTAAAGC  150

seq1  ATTTTAGAGCAGACATTTAAAGTGTGAAATATAAGTGTTTACTTCCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAGCAGACATTTAAAGTGTGAAATATAAGTGTTTACTTCCATGT  200

seq1  CAGCAAGAGAATGCCTTTAAGTTTTGCAGGCTTTAGTCTCTATCATCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGAGAATGCCTTTAAGTTTTGCAGGCTTTAGTCTCTATCATCTCT  250

seq1  AAATTCACTGCAAATTTTTCTGGGTATACTAAAATAAAAATCTACCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACTGCAAATTTTTCTGGGTATACTAAAATAAAAATCTACCATGG  300

seq1  CCACTGGATAGTCATGTCTGAGAATGTCAGATGGAAGTGTCTCGGTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGATAGTCATGTCTGAGAATGTCAGATGGAAGTGTCTCGGTTCCT  350

seq1  GCTCCTTGGGAATATGAGTAAGAAAATACAGAAGATGAGTCATTTCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTGGGAATATGAGTAAGAAAATACAGAAGATGAGTCATTTCATCA  400

seq1  GCTGTAAGACCAAAAATGTTCTGAGTATTTGATAAATAGCGAATGTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAGACCAAAAATGTTCTGAGTATTTGATAAATAGCGAATGTCATT  450

seq1  AGAAGTTCTCAGAATACCTAATGGAATTTACACATTGTAATCTTCAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTCTCAGAATACCTAATGGAATTTACACATTGTAATCTTCAACTT  500

seq1  AATGTGAATGTTCTGTACACACATTTAGAAAGCAGAATATAAAAGTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAATGTTCTGTACACACATTTAGAAAGCAGAATATAAAAGTAAAA  550

seq1  ACAAAAAAATGTAGGGGGACTAAAGCTTTCAGAGGCAATATCAGTATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAATGTAGGGGGACTAAAGCTTTCAGAGGCAATATCAGTATTGT  600

seq1  GAACCTTAGGCTGACAGTTTTCATTACATTCTTTCATAGTTTTATATATT  650
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAACCTTAGGCTGACAGTTTTCATTAAATTCTTTCATAGTTTTATATATT  650

seq1  AAAGAATTC  659
      |||||||||
seq2  AAAGAATTC  659

seq1: chr9_78812172_78813228
seq2: B6Ng01-064L15.g_69_1107

seq1  GAATTCTACATATGTTTCTTAATTGATCTAACTTATAATTCTAAATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATATGTTTCTTAATTGATCTAACTTATAATTCTAAATATAA  50

seq1  TTCGATATCAGAAGAGTGTGGGGTTTGGAGTTAATGTTGTATCTAGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATATCAGAAGAGTGTGGGGTTTGGAGTTAATGTTGTATCTAGATCT  100

seq1  TAACCTTCAGTCCAGTGCTTTAGTGAAGGTGAAGGTCAGCTCTATTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTCAGTCCAGTGCTTTAGTGAAGGTGAAGGTCAGCTCTATTTAGA  150

seq1  TGGCCTTCACTTTAGCTTCCATTCTATTTCTATGATTATTTAATTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTCACTTTAGCTTCCATTCTATTTCTATGATTATTTAATTTTATT  200

seq1  TATGTGAAAATGTTGAAATATGCATATAATGAAGTGTTAGATACCCATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAAAATGTTGAAATATGCATATAATGAAGTGTTAGATACCCATCC  250

seq1  TGTGTTTTATTTTGTAAACTTGAGCACAGTAATATTTTAAGTCATAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTATTTTGTAAACTTGAGCACAGTAATATTTTAAGTCATAACAG  300

seq1  CAACTCTTGGGATAATATCCAGGGTTCCATAGTTTAGTGTGCTTTCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTGGGATAATATCCAGGGTTCCATAGTTTAGTGTGCTTTCTACT  350

seq1  TAGTCATGCCTTCTGTCAATGAGGTAGCAACTGAGTGAGAGTCATATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATGCCTTCTGTCAATGAGGTAGCAACTGAGTGAGAGTCATATTTA  400

seq1  GGTAATTGTTGGGGGGAATGGTGATCAAGACTCTAAGGATTTTTACATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATTGTTGGGGGGAATGGTGATCAAGACTCTAAGGATTTTTACATAA  450

seq1  CTAGAAATATAGACTGTGCCTTCCTTGTCTAGACAAGTATCTAAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATATAGACTGTGCCTTCCTTGTCTAGACAAGTATCTAAATAAAA  500

seq1  TAAAGCATAATCCTGTAAATTTCCCTTCTGTCCAAATGGTTGATTTTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCATAATCCTGTAAATTTCCCTTCTGTCCAAATGGTTGATTTTTAG  550

seq1  AAACTCAGTGTTGCATGGGAATGTTTGCATTTTTCAGCCTCAGAGCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGTGTTGCATGGGAATGTTTGCATTTTTCAGCCTCAGAGCACAG  600

seq1  CCATGATTTAAAAAAACAAAACAAAAAGATTCAGTGGGGCAGAGGAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATTTAAAAAAACAAAACAAAAAGATTCAGTGGGGCAGAGGAACAT  650

seq1  GTGGCCACGTGGCCTGTGTGTGAGCATCAAACAGGAAACACAGCCATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCACGTGGCCTGTGTGTGAGCATCAAACAGGAAACACAGCCATTTT  700

seq1  TTTAACCTAAATCTTTCACTTCCCAGGGTGACTTGTTTGTATTAGGTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCTAAATCTTTCACTTCCCAGGGTGACTTGTTTGTATTAGGTGCC  750

seq1  AAGAGCCCTCCAAGAGGTGAAAGCTGCTTTCATTTTTCATTTCAGATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCCTCCAAGAGGTGAAAGCTGCTTTCATTTTTCATTTCAGATTGA  800

seq1  AGTGCACCCCTTGATGCAGCTGCAGAGCTCCTCCCCTCCCCCCTTCTCCC  850
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  AGTGCACCCCTTGATGCAGCTGCAGAGCTCCT-CCCTCCCCCTTTCTCCC  849

seq1  CTCCTACTCTGCATATAGTCAAGAAAGGGGCTTTTAATCTCTTGAGACAA  900
      |||||||||||||||||||| ||||||||   ||||||||||||| ||||
seq2  CTCCTACTCTGCATATAGTC-AGAAAGGG--CTTTAATCTCTTGAAACAA  896

seq1  AGGGCTTATTAAGGAACGAAATGGGGGTCCAGGATTCCTAGGTGAGCCTG  950
      | |||||| ||||| ||||||| ||||||||||| |||||||||||||||
seq2  A-GGCTTA-TAAGG-ACGAAAT-GGGGTCCAGGA-TCCTAGGTGAGCCTG  941

seq1  AAAAACAGTGAAGGTGGCCAAGAAGCCAGAACAAAACCAAGGGAAAGGAC  1000
       |||||| |||||   ||||||||||| ||   |||||||||||||||||
seq2  -AAAACA-TGAAG--TGCCAAGAAGCC-GA--CAAACCAAGGGAAAGGAC  984

seq1  TTGAATTCTTTCTGAGGCTTTGCATGGTTAATAAGACATGTGGATTCCAG  1050
      |||| ||||||||||||| |||||||||||| |||||  ||||||| |||
seq2  TTGATTTCTTTCTGAGGC-TTGCATGGTTAA-AAGACTGGTGGATT-CAG  1031

seq1  CT-GTTTC  1057
      || |||||
seq2  CTGGTTTC  1039