BAC Information

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BAC

Clone NameB6Ng01-071I14
Chromosome9 (Build37)
Map Location 90,803,946 - 90,954,337
singlet/doubletdoublet
Overlap genenone
Upstream geneRasgrf1, Ctsh, Morf4l1, LOC621414, Adamts7, Tbc1d2b, LOC100039777, LOC100039925
Downstream geneEG434428, LOC621576, Zic1, Zic4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071I14.bB6Ng01-071I14.g
ACCDH889209DH889210
length1,1251,122
definitionDH889209|Mus musculus domesticus DNA, BAC clone: B6Ng01-071I14, 5' end.DH889210|Mus musculus domesticus DNA, BAC clone: B6Ng01-071I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,803,946 - 90,805,078)(90,953,199 - 90,954,337)
sequence
gaattctttgtttagctctgaaaaatgtagcccatttttaatagggttat
tcagttctctggagtctaatttcttgagttctttgtatatattggatatt
agccctctgttggatgtaggattggtaaagatcttttcccagtctgttgg
ttgctttttgtcctcttaacagtgttctttgccttacagaagctttgtaa
ttttatgaggtcccatttgtcaattcttgatcttaaagcataagccattg
gtgttctgtttaggacattttcccctctgcctatgtcctcgaggctcttc
cccactttctcttgggttttataaatggtcatgtaagctatgattttttt
tccagatttaattagccaactctctgcagtttttcaaactataagtaata
aggtagtattttataaagaagtaaatgtattgcgataattaaggtcatcc
atgttagtaattataatcttgaggattatatcatcctttgtattaattta
acatattttctctgtcatacgtgggggccattaaaatagaaactacatag
gagttttatttttattttttaattaggtattttcttcatttacatttcca
atgctatccacaaggtcccccatagcctccccccactcccctacccaccc
actcccacttcttgtccctagcattcccctgtactgaggcatataaagtt
ttcaagaccaatgggcctctctttccaatgatttcattgcattttaaaga
atcaggcagagtgtatttttaaattcattcagtggtttaatctgaattct
cttccgacattctttaccagcccattcctcactcagcacagagctgttta
atcctctcctctcaatgcattatgttatatattttcttttgctgttgaag
tctagctttattactttgctctagcagatatgacatagaaatcatttcac
ttcttatatttgttaaaatatattttaatgtctacatacctaaaaatatc
tttaaaaacctaaccaaaatagtgaatgaaacaatgaacaacttaagaca
cagaaaaaaaagagagaaaagaactcccaattcttagaatattttgttaa
aatagccataaagaaatctatagat
gaattctctgaacatgactgattaactataattttaggaagcaaattgtt
aatatttttaatgtatgatttaaaaagaaatctatgtaagtacatatttt
tcttttttctaagtgcaaaattccataggaaagcatgctaatctaataaa
atgggttgagtttttcttcacacaaacagtaaatgtaactcaatttagag
ctacatgtgaagccagttatttttaacctcagcagagcaaagtgtgaata
taatgacatcctgcctatagatttaactttccttcaaggtacctgttcat
taaataaagtggtatattttctcttatagggaatatatagtgtttcctaa
tttaaaattgtgtttagcattcgggtatagcattcattatagtaatcaca
ttacaaaattcaagtaatacatagcatagaaaattcagctgtgaacgctc
tcttctttatggaattcctccataccctaacctcaggctacttttctaaa
aggtaaccccagctatcattacactgcctgaaatgaagattctcttctgt
ttggcacatgtggtttttatttttctgtaaatatatgttgtacataaata
aaactatgcagtctgtgttttctttttaaattctcagtaaaatataaaca
accatttgtgggtttgcaattagaccataagctttctttttgtggtgaaa
agcaatgtgcctgtgctttcttgtgatcttcactagtagagccaggcatc
atctgcatctttcaaggcatagtagttggcaactgcaaaggttctaaacc
cacttgttctgaagaaagggagtggatggcatggctgacattcaggacaa
actgcaatgtgtgctttgcaaacttagagtcaaggtcttactccaaccaa
atctggtttgttttgtaactggaaaacataatgatgcagaaatttcagac
tatttttccaaactactcattcaaaataagatctacatgatgaaatattg
gattgctagttttaatatttctcagaagacacacaagtttcttcttcttt
tttttttttttctggtagcagctggatttattaagaagagaagaggctgg
gcatgtagcacatgccattaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_90803946_90805078
seq2: B6Ng01-071I14.b_39_1163

seq1  GAATTCTTTGTTTAGCTCTGAAAAATGTAGCCCATTTTTAATAGGGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAAAAATGTAGCCCATTTTTAATAGGGTTAT  50

seq1  TCAGTTCTCTGGAGTCTAATTTCTTGAGTTCTTTGTATATATTGGATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTCTGGAGTCTAATTTCTTGAGTTCTTTGTATATATTGGATATT  100

seq1  AGCCCTCTGTTGGATGTAGGATTGGTAAAGATCTTTTCCCAGTCTGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCTGTTGGATGTAGGATTGGTAAAGATCTTTTCCCAGTCTGTTGG  150

seq1  TTGCTTTTTGTCCTCTTAACAGTGTTCTTTGCCTTACAGAAGCTTTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTGTCCTCTTAACAGTGTTCTTTGCCTTACAGAAGCTTTGTAA  200

seq1  TTTTATGAGGTCCCATTTGTCAATTCTTGATCTTAAAGCATAAGCCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAGGTCCCATTTGTCAATTCTTGATCTTAAAGCATAAGCCATTG  250

seq1  GTGTTCTGTTTAGGACATTTTCCCCTCTGCCTATGTCCTCGAGGCTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTGTTTAGGACATTTTCCCCTCTGCCTATGTCCTCGAGGCTCTTC  300

seq1  CCCACTTTCTCTTGGGTTTTATAAATGGTCATGTAAGCTATGATTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTCTCTTGGGTTTTATAAATGGTCATGTAAGCTATGATTTTTTT  350

seq1  TCCAGATTTAATTAGCCAACTCTCTGCAGTTTTTCAAACTATAAGTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATTTAATTAGCCAACTCTCTGCAGTTTTTCAAACTATAAGTAATA  400

seq1  AGGTAGTATTTTATAAAGAAGTAAATGTATTGCGATAATTAAGGTCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTATTTTATAAAGAAGTAAATGTATTGCGATAATTAAGGTCATCC  450

seq1  ATGTTAGTAATTATAATCTTGAGGATTATATCATCCTTTGTATTAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGTAATTATAATCTTGAGGATTATATCATCCTTTGTATTAATTTA  500

seq1  ACATATTTTCTCTGTCATACGTGGGGGCCATTAAAATAGAAACTACATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTCTCTGTCATACGTGGGGGCCATTAAAATAGAAACTACATAG  550

seq1  GAGTTTTATTTTTATTTTTTAATTAGGTATTTTCTTCATTTACATTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTATTTTTATTTTTTAATTAGGTATTTTCTTCATTTACATTTCCA  600

seq1  ATGCTATCCACAAGGTCCCCCATAGCCTCCCCCCACTCCCCTACCCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATCCACAAGGTCCCCCATAGCCTCCCCCCACTCCCCTACCCACCC  650

seq1  ACTCCCACTTCTTGTCCCTAGCATTCCCCTGTACTGAGGCATATAAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACTTCTTGTCCCTAGCATTCCCCTGTACTGAGGCATATAAAGTT  700

seq1  TTCAAGACCAATGGGCCTCTCTTTCCAATGATTTCATTGCATTTTAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGACCAATGGGCCTCTCTTTCCAATGATTTCATTGCATTTTAAAGA  750

seq1  ATCAGGCAGAGTGTATTTTTAAATTCATTCAGTGGTTTAATCTGAATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCAGAGTGTATTTTTAAATTCATTCAGTGGTTTAATCTGAATTCT  800

seq1  CTTCCGACATTCTTTACCAGCCCATTCCTCACTCAGCACAGAGCTGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGACATTCTTTACCAGCCCATTCCTCACTCAGCACAGAGCTGTTTA  850

seq1  ATCCTCTCCTCTCAATGCATTATGTTATATATTTTCTTTTGCTGTTGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTCCTCTCAATGCATTATGTTATATATTTTCTTTTGCTGTTGAAG  900

seq1  TCTAGCTTTATTACTTTGCTCTAGCAGATATGACATAGAAATCATTTCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTTATTACTTTGCTCTAGCAGATATGACATAGAAATCATTTCAC  950

seq1  TTCTTATATTTGTTAAAATATATTTTAATGTCTACAATAACCTAAAAAAT  1000
      ||||||||||||||||||||||||||||||||||||   |||| ||||||
seq2  TTCTTATATTTGTTAAAATATATTTTAATGTCTACA--TACCT-AAAAAT  997

seq1  ATCTTTAAAAAAACCTAACCAAAATAGTGAATGAAACAATGAACAACTTA  1050
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTT--AAAAACCTAACCAAAATAGTGAATGAAACAATGAACAACTTA  1045

seq1  AGACACAGAAAAAAAAAGAGAGAAAAGAACTTCCCAATTCTTAGGAATAA  1100
      |||||||| ||||||||||||||||||||| |||||||||||| |||| |
seq2  AGACACAG-AAAAAAAAGAGAGAAAAGAAC-TCCCAATTCTTA-GAAT-A  1091

seq1  TTCTGTAAAAATAGCCAT-AAGAAATCTATAGAT  1133
      || ||| ||||||||||| |||||||||||||||
seq2  TTTTGTTAAAATAGCCATAAAGAAATCTATAGAT  1125

seq1: chr9_90953199_90954337
seq2: B6Ng01-071I14.g_68_1189 (reverse)

seq1  ATTAATGGCATGTGCTACCATTGCCCAGCCTC-TCTCTTCCTTTTAAATA  49
      ||||||||||||||||||   ||||||||||| |||||||   ||||   
seq2  ATTAATGGCATGTGCTAC--ATGCCCAGCCTCTTCTCTTC---TTAA--T  43

seq1  AAATCCCAAGCTGCTTACCAGAAAAAAAAAAAAAGAAAGAAAGAAACTTG  99
      ||||||  |||||| |||||||||||||||||||  ||| ||||||||||
seq2  AAATCC--AGCTGC-TACCAGAAAAAAAAAAAAAAGAAG-AAGAAACTTG  89

seq1  TGTGTCCTTCTGAGAAATATTAAAAACTTAGCAATCCAATATTTCATCAT  149
      ||||| |||||||||||||||||||   ||||||||||||||||||||| 
seq2  TGTGT-CTTCTGAGAAATATTAAAA--CTAGCAATCCAATATTTCATCA-  135

seq1  TGTAGAATCTTATTTTGAATGAGTAGTTTTGGAAAAATAGTTCTGAAATT  199
      ||||| |||||||||||||||||||| ||||||||||||| |||||||||
seq2  TGTAG-ATCTTATTTTGAATGAGTAG-TTTGGAAAAATAG-TCTGAAATT  182

seq1  TCTGCATCATTATGTTTTCCAGTTACAAAACAAACCAGATTTGGTTGGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATCATTATGTTTTCCAGTTACAAAACAAACCAGATTTGGTTGGAG  232

seq1  TAAGACCTTGACTCTAAGTTTGCAAAGCACACATTGCAGTTTGTCCTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCTTGACTCTAAGTTTGCAAAGCACACATTGCAGTTTGTCCTGAA  282

seq1  TGTCAGCCATGCCATCCACTCCCTTTCTTCAGAACAAGTGGGTTTAGAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCCATGCCATCCACTCCCTTTCTTCAGAACAAGTGGGTTTAGAAC  332

seq1  CTTTGCAGTTGCCAACTACTATGCCTTGAAAGATGCAGATGATGCCTGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAGTTGCCAACTACTATGCCTTGAAAGATGCAGATGATGCCTGGC  382

seq1  TCTACTAGTGAAGATCACAAGAAAGCACAGGCACATTGCTTTTCACCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAGTGAAGATCACAAGAAAGCACAGGCACATTGCTTTTCACCACA  432

seq1  AAAAGAAAGCTTATGGTCTAATTGCAAACCCACAAATGGTTGTTTATATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGCTTATGGTCTAATTGCAAACCCACAAATGGTTGTTTATATT  482

seq1  TTACTGAGAATTTAAAAAGAAAACACAGACTGCATAGTTTTATTTATGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGAATTTAAAAAGAAAACACAGACTGCATAGTTTTATTTATGTA  532

seq1  CAACATATATTTACAGAAAAATAAAAACCACATGTGCCAAACAGAAGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATATATTTACAGAAAAATAAAAACCACATGTGCCAAACAGAAGAGA  582

seq1  ATCTTCATTTCAGGCAGTGTAATGATAGCTGGGGTTACCTTTTAGAAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATTTCAGGCAGTGTAATGATAGCTGGGGTTACCTTTTAGAAAAG  632

seq1  TAGCCTGAGGTTAGGGTATGGAGGAATTCCATAAAGAAGAGAGCGTTCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGAGGTTAGGGTATGGAGGAATTCCATAAAGAAGAGAGCGTTCAC  682

seq1  AGCTGAATTTTCTATGCTATGTATTACTTGAATTTTGTAATGTGATTACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAATTTTCTATGCTATGTATTACTTGAATTTTGTAATGTGATTACT  732

seq1  ATAATGAATGCTATACCCGAATGCTAAACACAATTTTAAATTAGGAAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAATGCTATACCCGAATGCTAAACACAATTTTAAATTAGGAAACA  782

seq1  CTATATATTCCCTATAAGAGAAAATATACCACTTTATTTAATGAACAGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATTCCCTATAAGAGAAAATATACCACTTTATTTAATGAACAGGT  832

seq1  ACCTTGAAGGAAAGTTAAATCTATAGGCAGGATGTCATTATATTCACACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAAGGAAAGTTAAATCTATAGGCAGGATGTCATTATATTCACACT  882

seq1  TTGCTCTGCTGAGGTTAAAAATAACTGGCTTCACATGTAGCTCTAAATTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTGCTGAGGTTAAAAATAACTGGCTTCACATGTAGCTCTAAATTG  932

seq1  AGTTACATTTACTGTTTGTGTGAAGAAAAACTCAACCCATTTTATTAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACATTTACTGTTTGTGTGAAGAAAAACTCAACCCATTTTATTAGAT  982

seq1  TAGCATGCTTTCCTATGGAATTTTGCACTTAGAAAAAAGAAAAATATGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGCTTTCCTATGGAATTTTGCACTTAGAAAAAAGAAAAATATGTA  1032

seq1  CTTACATAGATTTCTTTTTAAATCATACATTAAAAATATTAACAATTTGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATAGATTTCTTTTTAAATCATACATTAAAAATATTAACAATTTGC  1082

seq1  TTCCTAAAATTATAGTTAATCAGTCATGTTCAGAGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAAATTATAGTTAATCAGTCATGTTCAGAGAATTC  1122