BAC Information

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BAC

Clone NameB6Ng01-074C23
Chromosome19 (Build37)9 (Build37)
Map Location 31,269,086 - 31,269,11956,031,820 - 56,032,158
singlet/doubletsingletsinglet
Overlap genePrkg1
Upstream geneMbl2, LOC100042088, LOC668020, EG546723, Dkk1, LOC625995, Cstf2t
Downstream gene8430431K14Rik, 1810073H04Rik, Asah2, EG668042, Sgms1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074C23.bB6Ng01-074C23.g
ACCDH891106DH891107
length624339
definitionDH891106|Mus musculus domesticus DNA, BAC clone: B6Ng01-074C23, 5' end.DH891107|Mus musculus domesticus DNA, BAC clone: B6Ng01-074C23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(31,269,086 - 31,269,119)(56,031,820 - 56,032,158)
sequence
gaattcaccttacagcattcagaatgcctaagatcaaaacctcaggtgac
aacacctgttggagaggatgcggagaaagaggaacattcctgcattgctg
gtgagattgcacactggtacaaccacctggaaatcaatctggagtttctt
cagaaattggggaatagatctacctgaagacccagctataccactcttca
gaatatatccaaaagatgcccccacatgccacaggggcaactgttttact
atgttcagagcagccttatttgtgatagatagaagctgggaacaacctag
atgtcccacgacagaagaatggatacagaaaatgtggttcatttacgcag
tgaaatactactcagccatgaagaacgaggatatcctgacatttgcaagc
agatggatagaactaaaaaataatacccaaagtgaggtaactcagaccca
aaaggatatgtatgctacaaactcactgaaaagtagatattagccaagaa
agaaaaaccccatacagaatacacaagatacagtccagagaattgaaaag
gctcaacaagctgatgtacccattgaggatgtctcagtcccacttgggag
agaaaagaaagcaatcacaagtgg
caggacgatcacttcctccccagttggtctctgctggatgttgtaagtac
cttatttgatggtactcttgcttgttgtttcagtggagctaccccagtca
tctctgctgaaggttgtaaatgcctgatttgatgggattgctacttgtct
tagttactgtactgctgctgtgaagaggcaccatcacctaggcaactctt
atacaaaaaagcatttaaccgggagcttgcttactccctggtccattatc
atcacgtcaggttccatgctggcaagtagacatggcatgctggagaagta
tctgaaagctacatcctgactcggggagggggggatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_31269086_31269119
seq2: B6Ng01-074C23.b_636_669 (reverse)

seq1  CCACTTGTGATTGCTTTCTTCTCCCTCCCAAGTG  34
      |||||||||||||||||||| || ||||||||||
seq2  CCACTTGTGATTGCTTTCTTTTCTCTCCCAAGTG  34

seq1: chr9_56031820_56032158
seq2: B6Ng01-074C23.g_73_411 (reverse)

seq1  CCTATCCCCCCCTCCCCGAGTCAGGATGTAGCTTTCAGATACTTCTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCCCCCTCCCCGAGTCAGGATGTAGCTTTCAGATACTTCTCCAG  50

seq1  CATGCCATGTCTACTTGCCAGCATGGAACCTGACGTGATGATAATGGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCATGTCTACTTGCCAGCATGGAACCTGACGTGATGATAATGGACC  100

seq1  AGGGAGTAAGCAAGCTCCCGGTTAAATGCTTTTTTGTATAAGAGTTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTAAGCAAGCTCCCGGTTAAATGCTTTTTTGTATAAGAGTTGCCT  150

seq1  AGGTGATGGTGCCTCTTCACAGCAGCAGTACAGTAACTAAGACAAGTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATGGTGCCTCTTCACAGCAGCAGTACAGTAACTAAGACAAGTAGC  200

seq1  AATCCCATCAAATCAGGCATTTACAACCTTCAGCAGAGATGACTGGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATCAAATCAGGCATTTACAACCTTCAGCAGAGATGACTGGGGTA  250

seq1  GCTCCACTGAAACAACAAGCAAGAGTACCATCAAATAAGGTACTTACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACTGAAACAACAAGCAAGAGTACCATCAAATAAGGTACTTACAAC  300

seq1  ATCCAGCAGAGACCAACTGGGGAGGAAGTGATCGTCCTG  339
      |||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCAGAGACCAACTGGGGAGGAAGTGATCGTCCTG  339