BAC Information

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BAC

Clone NameB6Ng01-076F16
Chromosome6 (Build37)9 (Build37)
Map Location 18,835,448 - 18,835,96812,685,731 - 12,685,772
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076F16.bB6Ng01-076F16.g
ACCDH892646DH892647
length1,000661
definitionDH892646|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F16, 5' end.DH892647|Mus musculus domesticus DNA, BAC clone: B6Ng01-076F16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(12,685,731 - 12,685,772)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttaa
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttcttggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggagattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcactccgagatattttatattat
ttgtgactattgagaaggtgttgtttccctaatttctttctcagcctgtt

gaattctttgtttatctctgtaccccattttttaatggggttatttgaat
ttctggagtccagctttttgagctctttgtatatattggatgttagtccc
ctatcagatttaggattggtaaaaatcctttcccaatctgttggtggcca
ttttgtcttatcgacagtatcttttgcctcacagaagctttgcaatttta
tgaggtcccctttgttgattcttttttttttcatttttactaggtatttc
atttacatttcaaatgctatcccaaaagtcccctttaccctcctcccttc
cgccctgctcccctacccgcctgttgtgtccagccagcagctcacatgtt
tgggttctagtctggaaaggcatcttagaaacctggaagagaagagggga
ctaggtggtacgagataaagatggaaccaagacaagactctgctcaaggt
tcaattttactattctgacacgcagttatgaatgaggggaagggggccca
attcccgccaaataatcctggggtaaggttgcaggtgaacacatgatgac
tctggaacaggaaaacagcaggctccagcagtgggcgtggtagaacaatt
gagtgggaagctccacccctgagcaagcaggtttcaggctgaggggggtg
ggggaggttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-076F16.b_50_571 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||| ||||| || |||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAATGGATTAAAGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr9_12685731_12685772
seq2: B6Ng01-076F16.g_686_728 (reverse)

seq1  TAACCTCGCCCA-CCCCCTCAGCCTGAAACCTGTTTGCTCAGG  42
      ||||||| |||| |||||||||||||||||||| |||||||||
seq2  TAACCTCCCCCACCCCCCTCAGCCTGAAACCTGCTTGCTCAGG  43