BAC Information

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BAC

Clone NameB6Ng01-078E06
Chromosome9 (Build37)
Map Location 38,140,277 - 38,281,438
singlet/doubletdoublet
Overlap geneOlfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905
Upstream geneCcdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25
Downstream geneOlfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078E06.bB6Ng01-078E06.g
ACCDH894009DH894010
length1,2071,075
definitionDH894009|Mus musculus domesticus DNA, BAC clone: B6Ng01-078E06, 5' end.DH894010|Mus musculus domesticus DNA, BAC clone: B6Ng01-078E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,280,216 - 38,281,438)(38,140,277 - 38,141,366)
sequence
gaattcttaagaaaaatgaaggtggctaatattggtttcagacgggtaag
tagttgttatttctgaaatataagtccaagatttaatattgttaaaaaac
tactataatagtagtaattgtttattaactttccaagtccagtaactaca
tgaggaaggacactcgttcattttaacgctttctcttactcagggtcttt
atcaaggcatctttaacatctttgttcctcaagctgtagattaagggatt
cagcagaggaactgtattggtataaaagatagaggagattttgccttcat
tcattgactcagcagaagatggtttgagatacataaatgcacctgatcca
aagaacagagaaactgcaattatgtgggagctgcaggtgctgaaggcttt
ggacctgtcctccttggagctgatacgaaaaatacttgcgatgataaaac
cataagagataaagatggtgatagtgggcacaatgatgttgatgcccaca
acaacaaatacctccagttcattgacataggtgctggtgcaggagagctg
aagcaaagggaggatgtcacagaagtagtgattgatggtgttagcatcac
agaaggtcagtctcagcatgcatcccgtgtgagccatggcaccagaaaat
gccatcatgtatgaactaaacataaggatcaaacattgtttaggagacat
gacaatattatacaagagtgggttacaaatggccacatagcgatcatagg
ccattgaggtcaaaatgtaacactcagagatggagaaaaaacagaaaaag
aaaagctgtgccatgcatcctctgtaggaaatagtattcttctctgatat
aaagctctccagcattttgggtgtgaaaacagaagagtaccagaggtcaa
caaaggacaagttaaagaggaaaaagtacattggagtgtggagatgagag
ttcagtccaattaagctaatcaaaccctgatttcccagcacagtgaccac
atacatcattagaaacaggatgaagaggggcactggagatcggactcctt
ggttaatcccccagaatgattcagtcactgaagagcattttcaaacccat
ttctcttaaagaatctgtgaacccaggccagagaaaacatgtagaggaaa
tcgagcattcccccaccgtctttcttaccaataaagcatcaccctgaact
atccctt
gaattccaagagattttgtttcaaaatatgagcttggagaaaatatttct
taaatcaacctaatttaaatgatagtattagagaattaagcattggaatt
tattttaatattgaatagattactacattgtttaatttgtcagtgtcacc
ttcggttcttccattttattcctattacagaacatgataaatggagttgt
gtaagatggtttgaaattttctcagaaactcacattttatgacgctaaca
acatttattaaatacatagaataagatgtataagtataacatctttgaag
ctttgatacttcaccagaaagtgaatatgagttacaaatatggactgagt
tttgtatttaagtcagcatcatagtcagaataaatcatgaaatcatttgg
ctcagtttgatcaaagcaactagcttcttttgattgtctaattagatatg
ttaccctagatagtaaaaatgacttactattttaataaaatatattctaa
taatatatattcttaagatattggccaataattttttaagcatcacaata
tagtgctatctaatataagcatatttgataattactgaaattttggtgtg
ttgtgtatgtttttactaaattatgtatacagtctgcacacattgcttat
attattctgatatcacaggttcctcaaatacataagtggaattaggtaaa
ctggttccataactttatattaacatatattggattcatttcgaatctct
ttcaaacaaaaacataatgaaaattatgattgattcataaaaattcagta
tcatcaacataaaggtaatattcacatgttaggctgtcaaaatatgaaat
taaaacgtccaaaaacaacatttcaaacccatgaatgatgttcatttacc
cacctcgttcattccatatcgctaagtaatcgaaatgttcatggattctg
atttgttgcatcatcaaagtttcaatatttctctctgcagtttttttccc
tttgtagtcatcagtgagtatcagaacagactgcaaaacatgattttaga
tgagttgtactgggcccagtcagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38280216_38281438
seq2: B6Ng01-078E06.b_44_1250 (reverse)

seq1  AAGGGATTAGTTCTAAGGGTGATGCTCTATGTTGTATGAAAGACGGTTGG  50
      |||||| ||||||  ||||||||||| ||| | ||| ||||||||| |||
seq2  AAGGGA-TAGTTC--AGGGTGATGCTTTAT-TGGTAAGAAAGACGG-TGG  45

seq1  GGGAATGCTCGTATTTCCTTCTAACATGTTTTCTCTTGGCCTGGGTTCAC  100
      ||||||||||| |||||| ||| |||||||||||| ||||||||||||||
seq2  GGGAATGCTCG-ATTTCC-TCT-ACATGTTTTCTC-TGGCCTGGGTTCAC  91

seq1  AGATTCCTTTAAAGAAGAATGGGTTTTGAAAATGGCTCTTCAGTGACTGA  150
      ||||||  || ||||  |||||| ||||||||| ||||||||||||||||
seq2  AGATTC--TTTAAGAGAAATGGG-TTTGAAAAT-GCTCTTCAGTGACTGA  137

seq1  ATTCATTCTGGTGGGATTAACCAAGGAGTCCGATCTCCAGTGCCCCCTCT  200
      | ||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  A-TCATTCTGG-GGGATTAACCAAGGAGTCCGATCTCCAGTG-CCCCTCT  184

seq1  TCATCCTGTTTCTAATGATGTATGTGGTCACTGTGCTGGGAAATCAGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTGTTTCTAATGATGTATGTGGTCACTGTGCTGGGAAATCAGGGT  234

seq1  TTGATTAGCTTAATTGGACTGAACTCTCATCTCCACACTCCAATGTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTAGCTTAATTGGACTGAACTCTCATCTCCACACTCCAATGTACTT  284

seq1  TTTCCTCTTTAACTTGTCCTTTGTTGACCTCTGGTACTCTTCTGTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTTAACTTGTCCTTTGTTGACCTCTGGTACTCTTCTGTTTTCA  334

seq1  CACCCAAAATGCTGGAGAGCTTTATATCAGAGAAGAATACTATTTCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAAATGCTGGAGAGCTTTATATCAGAGAAGAATACTATTTCCTAC  384

seq1  AGAGGATGCATGGCACAGCTTTTCTTTTTCTGTTTTTTCTCCATCTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGCATGGCACAGCTTTTCTTTTTCTGTTTTTTCTCCATCTCTGA  434

seq1  GTGTTACATTTTGACCTCAATGGCCTATGATCGCTATGTGGCCATTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACATTTTGACCTCAATGGCCTATGATCGCTATGTGGCCATTTGTA  484

seq1  ACCCACTCTTGTATAATATTGTCATGTCTCCTAAACAATGTTTGATCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCTTGTATAATATTGTCATGTCTCCTAAACAATGTTTGATCCTT  534

seq1  ATGTTTAGTTCATACATGATGGCATTTTCTGGTGCCATGGCTCACACGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGTTCATACATGATGGCATTTTCTGGTGCCATGGCTCACACGGG  584

seq1  ATGCATGCTGAGACTGACCTTCTGTGATGCTAACACCATCAATCACTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCTGAGACTGACCTTCTGTGATGCTAACACCATCAATCACTACT  634

seq1  TCTGTGACATCCTCCCTTTGCTTCAGCTCTCCTGCACCAGCACCTATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACATCCTCCCTTTGCTTCAGCTCTCCTGCACCAGCACCTATGTC  684

seq1  AATGAACTGGAGGTATTTGTTGTTGTGGGCATCAACATCATTGTGCCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTGGAGGTATTTGTTGTTGTGGGCATCAACATCATTGTGCCCAC  734

seq1  TATCACCATCTTTATCTCTTATGGTTTTATCATCGCAAGTATTTTTCGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACCATCTTTATCTCTTATGGTTTTATCATCGCAAGTATTTTTCGTA  784

seq1  TCAGCTCCAAGGAGGACAGGTCCAAAGCCTTCAGCACCTGCAGCTCCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCAAGGAGGACAGGTCCAAAGCCTTCAGCACCTGCAGCTCCCAC  834

seq1  ATAATTGCAGTTTCTCTGTTCTTTGGATCAGGTGCATTTATGTATCTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGCAGTTTCTCTGTTCTTTGGATCAGGTGCATTTATGTATCTCAA  884

seq1  ACCATCTTCTGCTGAGTCAATGAATGAAGGCAAAATCTCCTCTATCTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTTCTGCTGAGTCAATGAATGAAGGCAAAATCTCCTCTATCTTTT  934

seq1  ATACCAATACAGTTCCTCTGCTGAATCCCTTAATCTACAGCTTGAGGAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAATACAGTTCCTCTGCTGAATCCCTTAATCTACAGCTTGAGGAAC  984

seq1  AAAGATGTTAAAGATGCCTTGATAAAGACCCTGAGTAAGAGAAAGCGTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTTAAAGATGCCTTGATAAAGACCCTGAGTAAGAGAAAGCGTTA  1034

seq1  AAATGAACGAGTGTCCTTCCTCATGTAGTTACTGGACTTGGAAAGTTAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAACGAGTGTCCTTCCTCATGTAGTTACTGGACTTGGAAAGTTAAT  1084

seq1  AAACAATTACTACTATTATAGTAGTTTTTTAACAATATTAAATCTTGGAC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTACTACTATTATAGTAGTTTTTTAACAATATTAAATCTTGGAC  1134

seq1  TTATATTTCAGAAATAACAACTACTTACCCGTCTGAAACCAATATTAGCC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCAGAAATAACAACTACTTACCCGTCTGAAACCAATATTAGCC  1184

seq1  ACCTTCATTTTTCTTAAGAATTC  1223
      |||||||||||||||||||||||
seq2  ACCTTCATTTTTCTTAAGAATTC  1207

seq1: chr9_38140277_38141366
seq2: B6Ng01-078E06.g_67_1141

seq1  GAATTCCAAGAGATTTTGTTTCAAAATATGAGCTTGGAGAAAATATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAGATTTTGTTTCAAAATATGAGCTTGGAGAAAATATTTCT  50

seq1  TAAATCAACCTAATTTAAATGATAGTATTAGAGAATTAAGCATTGGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAACCTAATTTAAATGATAGTATTAGAGAATTAAGCATTGGAATT  100

seq1  TATTTTAATATTGAATAGATTACTACATTGTTTAATTTGTCAGTGTCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAATATTGAATAGATTACTACATTGTTTAATTTGTCAGTGTCACC  150

seq1  TTCGGTTCTTCCATTTTATTCCTATTACAGAACATGATAAATGGAGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTTCTTCCATTTTATTCCTATTACAGAACATGATAAATGGAGTTGT  200

seq1  GTAAGATGGTTTGAAATTTTCTCAGAAACTCACATTTTATGACGCTAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATGGTTTGAAATTTTCTCAGAAACTCACATTTTATGACGCTAACA  250

seq1  ACATTTATTAAATACATAGAATAAGATGTATAAGTATAACATCTTTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTAAATACATAGAATAAGATGTATAAGTATAACATCTTTGAAG  300

seq1  CTTTGATACTTCACCAGAAAGTGAATATGAGTTACAAATATGGACTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATACTTCACCAGAAAGTGAATATGAGTTACAAATATGGACTGAGT  350

seq1  TTTGTATTTAAGTCAGCATCATAGTCAGAATAAATCATGAAATCATTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTAAGTCAGCATCATAGTCAGAATAAATCATGAAATCATTTGG  400

seq1  CTCAGTTTGATCAAAGCAACTAGCTTCTTTTGATTGTCTAATTAGATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTGATCAAAGCAACTAGCTTCTTTTGATTGTCTAATTAGATATG  450

seq1  TTACCCTAGATAGTAAAAATGACTTACTATTTTAATAAAATATATTCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTAGATAGTAAAAATGACTTACTATTTTAATAAAATATATTCTAA  500

seq1  TAATATATATTCTTAAGATATTGGCCAATAATTTTTTAAGCATCACAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATATTCTTAAGATATTGGCCAATAATTTTTTAAGCATCACAATA  550

seq1  TAGTGCTATCTAATATAAGCATATTTGATAATTACTGAAATTTTGGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTATCTAATATAAGCATATTTGATAATTACTGAAATTTTGGTGTG  600

seq1  TTGTGTATGTTTTTACTAAATTATGTATACAGTCTGCACACATTGCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATGTTTTTACTAAATTATGTATACAGTCTGCACACATTGCTTAT  650

seq1  ATTATTCTGATATCACAGGTTCCTCAAATACATAAGTGGAATTAGGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTGATATCACAGGTTCCTCAAATACATAAGTGGAATTAGGTAAA  700

seq1  CTGGTTCCATAACTTTATATTAACATATATTGGATTCATTTCGAATCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCCATAACTTTATATTAACATATATTGGATTCATTTCGAATCTCT  750

seq1  TTCAAACAAAAACATAATGAAAATTATGATTGATTCATAAAAATTCAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAAAAACATAATGAAAATTATGATTGATTCATAAAAATTCAGTA  800

seq1  TCATCAACATAAAGGTAATATTCACATGTTAGGCTGTCAAAAATATGAAA  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCATCAACATAAAGGTAATATTCACATGTTAGGCTGTC-AAAATATGAAA  849

seq1  TTAAAACGTCCAAAAAACAACATTTCAAACCCATGAATGATGTTCATTTA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACGTCC-AAAAACAACATTTCAAACCCATGAATGATGTTCATTTA  898

seq1  CCCACCTCGTTCATTCCATATCGCTAAGTAATCGAAATGTTCATGGATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTCGTTCATTCCATATCGCTAAGTAATCGAAATGTTCATGGATTC  948

seq1  TTGATTTGTTGCATTCATCAAAAGTTTCAAATATTTCTCTCTGCAGTTCT  1000
       |||||||||||| ||||| |||||||| ||||||||||||||||||| |
seq2  -TGATTTGTTGCA-TCATC-AAAGTTTC-AATATTTCTCTCTGCAGTT-T  993

seq1  TTTTCCCTTTGTAGTTCATCAGTGAGTATCAGAACAGACCTTGGCAACAA  1050
      |||||||||||||| ||||||||||||||||||||||||    |||| ||
seq2  TTTTCCCTTTGTAG-TCATCAGTGAGTATCAGAACAGAC---TGCAA-AA  1038

seq1  CATGAATTTTAGATGAAGTGGTACTGGGCCCAAGTCAGTT  1090
      |||| |||||||||| ||| ||||||||||| ||||||||
seq2  CATG-ATTTTAGATG-AGTTGTACTGGGCCC-AGTCAGTT  1075