BAC Information

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BAC

Clone NameB6Ng01-083A18
Chromosome9 (Build37)
Map Location 37,333,895 - 37,444,153
singlet/doubletdoublet
Overlap geneEsam1, Vsig2, Nrgn, Spa17, Siae
Upstream geneEG434396, A630095E13Rik, Acrv1, Chek1, Stt3a, Ei24, LOC627681, Fez1, Pknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479
Downstream geneTbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083A18.bB6Ng01-083A18.g
ACCDH897418DH897419
length1,096931
definitionDH897418|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A18, 5' end.DH897419|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,443,055 - 37,444,153)(37,333,895 - 37,334,825)
sequence
gaattcccttaattgtccagacggcactgctgcaccctggccacgtgggg
gcaccagcatactccacacccaaatgaaatgcttgtgtttttttcctaat
ctgaagtactgcgaagaagcttggttcaacctcccatggtgcttcttaca
aatacgaagactaatgaagatatgtaactgccaaacaaaaaaaacccaca
aaactggtcacattcaaaagatgttacaaatactagtgaagttttcaatc
tgttcctccaagatcccttttaaacccggcctccagatcttccttccctc
atgcttccagccacctgtctatcagtaactcttgagtgccccaccagcca
tggtctcttccatgggctccagtcctgaatttctaactgtgatctcaccg
ctgcattacttcaaacaccatctgtcatctttcctaacaagacagctctc
cctgcaaatgtcctgacttcttacaacaataataaatgctagcacccagc
atgttttcacatagattaagtcatgcaatacttaaaataagaaagatgtt
tgttcacaattacacagctcaaagagtaggaatcccagatgtgtaactcc
agtcccagaccttgtaccacactatcttgagttgtcatattgggtgtttc
cctttgaatccacatacttatataaatacatatggtaatataaaaagtaa
ctagcatatttttgttggtgataaagttaaggctaaagggtaagaggctt
ctgcaaactgtcaaatttaaaagaccagatgccatggttatatgcatcca
agtgcatatttttcatacgaactacatagtcacctttcaaacaacaagta
catgtaaaaaaagaaagtaagtcatttaagccatgctaggtggaagaaag
tcaacaaaaaccctttctgggaaacagggcacagtggcccggggagatgg
gtcagtacacattttcccacaagcattaagacaagttcagatcacccaac
ctacataaagcaggataggtggcacacatcagtaatcccagcatttctgt
aacaaatgggaagccacacagaaagttccccagaaacatgtagacc
gaattcttctgtgccatagggacagtcactctccttaggtccttagctga
ttatgtaacagagattttgggaagcagctcttgggcagggatggacacac
ctgtgtcatcagacgcttcagtgtcactaggcaagagccaaagctttgta
cttccttttcctgggaggagttattcatttggagtgacaacgtggtccag
gcaacagatgaagggtgtttgaaagaggtacttatgggactggagacatg
gctttggggttaagggtaaggatcttccgcagcattggggcttgattgca
tcttctcatagggcagctcagaatccaggggatccgacaccctcttctgg
cctctacaggcactgcacacgtggtgcagacacatgcaggcccatacaca
ctttttaaaaaatgtttttagtattctcaaatctagaaaaatctgatagg
caaggaaaaccaagacagcccatccctaacatcaccttttgacagtacaa
agtttgaaagctgagctgccaaagaggtagattccatagatgtcaggggc
agtctagtgtttgtataggcatttcgtagagccactgcatgactggtatt
tgaagaggagccaggctggggctctttaggtaggaaaagccattgcacaa
cactggagctgatggggtgtgtagagatgaggaggccaggctgcctctac
tgcctgacagttctgctccctcggaacaggccacgtcagacattcgtggc
tatgccttctgtcctgcgcagcaaagccctgcccaaatacttgaagcata
ttttttatttattggctgttaggctggaaccggtgcgttccccctgctga
agcagctcgggccatcatggggcgcagagtgccgccacccccatccccgc
cccaatgacatgggtgggggtgtgggggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37443055_37444153
seq2: B6Ng01-083A18.b_42_1137 (reverse)

seq1  GGTCTACATGTTTCTGGGGGACTTTCTTGTGTGGGCTTCCCATTTTGTTA  50
      ||||||||||||||||||| |||||| ||||| ||||||||| |||||||
seq2  GGTCTACATGTTTCTGGGGAACTTTC-TGTGT-GGCTTCCCA-TTTGTTA  47

seq1  CAGAAATGCTGGGATTACTGATGTGTGCCACCTATCCTGGCTTTATGTAG  100
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAGAAATGCTGGGATTACTGATGTGTGCCACCTATCCT-GCTTTATGTAG  96

seq1  GTTGGGTGGATCTGAACTTGTCTTAATGCTTTTGTGGGAAATGTGTACTG  150
      ||||||| ||||||||||||||||||||||| || || ||||||||||||
seq2  GTTGGGT-GATCTGAACTTGTCTTAATGCTTGTG-GGAAAATGTGTACTG  144

seq1  ACCCATCTCCCC-GGCCACTGTGCCCTGTTTCCCAGAAAGGGTTTTTGTT  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACCCATCTCCCCGGGCCACTGTGCCCTGTTTCCCAGAAAGGGTTTTTGTT  194

seq1  GACTTTCTTCCACCTAGCATGGCTT-AATGACTTACTTTCTTTTTTTACA  248
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GACTTTCTTCCACCTAGCATGGCTTAAATGACTTACTTTCTTTTTTTACA  244

seq1  TGTACTTGTTGTTTG-AAGGTGACTATGTAGTTCGTATGAAAAATATGCA  297
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTACTTGTTGTTTGAAAGGTGACTATGTAGTTCGTATGAAAAATATGCA  294

seq1  CTTGGATGCATATAACCATGGCATCTGGTCTTTTAAATTTGACAGTTTGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATGCATATAACCATGGCATCTGGTCTTTTAAATTTGACAGTTTGC  344

seq1  AGAAGCCTCTTACCCTTTAGCCTTAACTTTATCACCAACAAAAATATGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTCTTACCCTTTAGCCTTAACTTTATCACCAACAAAAATATGCT  394

seq1  AGTTACTTTTTATATTACCATATGTATTTATATAAGTATGTGGATTCAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTTTTTATATTACCATATGTATTTATATAAGTATGTGGATTCAAA  444

seq1  GGGAAACACCCAATATGACAACTCAAGATAGTGTGGTACAAGGTCTGGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACACCCAATATGACAACTCAAGATAGTGTGGTACAAGGTCTGGGA  494

seq1  CTGGAGTTACACATCTGGGATTCCTACTCTTTGAGCTGTGTAATTGTGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTACACATCTGGGATTCCTACTCTTTGAGCTGTGTAATTGTGAA  544

seq1  CAAACATCTTTCTTATTTTAAGTATTGCATGACTTAATCTATGTGAAAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCTTTCTTATTTTAAGTATTGCATGACTTAATCTATGTGAAAAC  594

seq1  ATGCTGGGTGCTAGCATTTATTATTGTTGTAAGAAGTCAGGACATTTGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGGTGCTAGCATTTATTATTGTTGTAAGAAGTCAGGACATTTGCA  644

seq1  GGGAGAGCTGTCTTGTTAGGAAAGATGACAGATGGTGTTTGAAGTAATGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGCTGTCTTGTTAGGAAAGATGACAGATGGTGTTTGAAGTAATGC  694

seq1  AGCGGTGAGATCACAGTTAGAAATTCAGGACTGGAGCCCATGGAAGAGAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTGAGATCACAGTTAGAAATTCAGGACTGGAGCCCATGGAAGAGAC  744

seq1  CATGGCTGGTGGGGCACTCAAGAGTTACTGATAGACAGGTGGCTGGAAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTGGTGGGGCACTCAAGAGTTACTGATAGACAGGTGGCTGGAAGC  794

seq1  ATGAGGGAAGGAAGATCTGGAGGCCGGGTTTAAAAGGGATCTTGGAGGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGAAGGAAGATCTGGAGGCCGGGTTTAAAAGGGATCTTGGAGGAA  844

seq1  CAGATTGAAAACTTCACTAGTATTTGTAACATCTTTTGAATGTGACCAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGAAAACTTCACTAGTATTTGTAACATCTTTTGAATGTGACCAGT  894

seq1  TTTGTGGGTTTTTTTTGTTTGGCAGTTACATATCTTCATTAGTCTTCGTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGTTTTTTTTGTTTGGCAGTTACATATCTTCATTAGTCTTCGTA  944

seq1  TTTGTAAGAAGCACCATGGGAGGTTGAACCAAGCTTCTTCGCAGTACTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGAAGCACCATGGGAGGTTGAACCAAGCTTCTTCGCAGTACTTC  994

seq1  AGATTAGGAAAAAAACACAAGCATTTCATTTGGGTGTGGAGTATGCTGGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGGAAAAAAACACAAGCATTTCATTTGGGTGTGGAGTATGCTGGT  1044

seq1  GCCCCCACGTGGCCAGGGTGCAGCAGTGCCGTCTGGACAATTAAGGGAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCACGTGGCCAGGGTGCAGCAGTGCCGTCTGGACAATTAAGGGAAT  1094

seq1  TC  1099
      ||
seq2  TC  1096

seq1: chr9_37333895_37334825
seq2: B6Ng01-083A18.g_67_997

seq1  GAATTCTTCTGTGCCATAGGGACAGTCACTCTCCTTAGGTCCTTAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTGCCATAGGGACAGTCACTCTCCTTAGGTCCTTAGCTGA  50

seq1  TTATGTAACAGAGATTTTGGGAAGCAGCTCTTGGGCAGGGATGGACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAACAGAGATTTTGGGAAGCAGCTCTTGGGCAGGGATGGACACAC  100

seq1  CTGTGTCATCAGACGCTTCAGTGTCACTAGGCAAGAGCCAAAGCTTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCATCAGACGCTTCAGTGTCACTAGGCAAGAGCCAAAGCTTTGTA  150

seq1  CTTCCTTTTCCTGGGAGGAGTTATTCATTTGGAGTGACAACGTGGTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTTCCTGGGAGGAGTTATTCATTTGGAGTGACAACGTGGTCCAG  200

seq1  GCAACAGATGAAGGGTGTTTGAAAGAGGTACTTATGGGACTGGAGACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGATGAAGGGTGTTTGAAAGAGGTACTTATGGGACTGGAGACATG  250

seq1  GCTTTGGGGTTAAGGGTAAGGATCTTCCGCAGCATTGGGGCTTGATTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGGGTTAAGGGTAAGGATCTTCCGCAGCATTGGGGCTTGATTGCA  300

seq1  TCTTCTCATAGGGCAGCTCAGAATCCAGGGGATCCGACACCCTCTTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCATAGGGCAGCTCAGAATCCAGGGGATCCGACACCCTCTTCTGG  350

seq1  CCTCTACAGGCACTGCACACGTGGTGCAGACACATGCAGGCCCATACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACAGGCACTGCACACGTGGTGCAGACACATGCAGGCCCATACACA  400

seq1  CTTTTTAAAAAATGTTTTTAGTATTCTCAAATCTAGAAAAATCTGATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAAAATGTTTTTAGTATTCTCAAATCTAGAAAAATCTGATAGG  450

seq1  CAAGGAAAACCAAGACAGCCCATCCCTAACATCACCTTTTGACAGTACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAACCAAGACAGCCCATCCCTAACATCACCTTTTGACAGTACAA  500

seq1  AGTTTGAAAGCTGAGCTGCCAAAGAGGTAGATTCCATAGATGTCAGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAAAGCTGAGCTGCCAAAGAGGTAGATTCCATAGATGTCAGGGGC  550

seq1  AGTCTAGTGTTTGTATAGGCATTTCGTAGAGCCACTGCATGACTGGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGTGTTTGTATAGGCATTTCGTAGAGCCACTGCATGACTGGTATT  600

seq1  TGAAGAGGAGCCAGGCTGGGGCTCTTTAGGTAGGAAAAGCCATTGCACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGAGCCAGGCTGGGGCTCTTTAGGTAGGAAAAGCCATTGCACAA  650

seq1  CACTGGAGCTGATGGGGTGTGTAGAGATGAGGAGGCCAGGCTGCCTCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGCTGATGGGGTGTGTAGAGATGAGGAGGCCAGGCTGCCTCTAC  700

seq1  TGCCTGACAGTTCTGCTCCCTCGGAACAGGCCACGTCAGACATTCGTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACAGTTCTGCTCCCTCGGAACAGGCCACGTCAGACATTCGTGGC  750

seq1  TATGCCTTCTGTCCTGCGCAGCAAAGCCCTGCCCAAATACTTGAAGCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTCTGTCCTGCGCAGCAAAGCCCTGCCCAAATACTTGAAGCATA  800

seq1  -TTTTTATTTATTGGCTGTTAGGCTGGAACCGGTGCGTTCCCCCTGCTGA  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTTATTGGCTGTTAGGCTGGAACCGGTGCGTTCCCCCTGCTGA  850

seq1  AGCAGCCCGGGCCATCAGGGGGCGCAGAGGTGCCGCCACCCCCATCCCCG  899
      |||||| |||||||||| |||||||||| |||||||||||||||||||||
seq2  AGCAGCTCGGGCCATCATGGGGCGCAGA-GTGCCGCCACCCCCATCCCCG  899

seq1  CCCCCAATGACATGGGT-GGGGTGTGGGGTTGA  931
       |||||||||||||||| ||||||||||| |||
seq2  -CCCCAATGACATGGGTGGGGGTGTGGGGGTGA  931