BAC Information

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BAC

Clone NameB6Ng01-090F20
Chromosome9 (Build37)
Map Location 93,279,788 - 93,280,902
singlet/doubletsinglet
Overlap genenone
Upstream genePlscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009, LOC100040114
Downstream geneLOC674371, LOC384967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090F20.bB6Ng01-090F20.g
ACCDH902686DH902687
length1,103585
definitionDH902686|Mus musculus domesticus DNA, BAC clone: B6Ng01-090F20, 5' end.DH902687|Mus musculus domesticus DNA, BAC clone: B6Ng01-090F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcctgttcttgtaagttgtttgtttttctggatcacaactga
aagccaggaatgaataaataataaataaacatttcatttctctttacaat
attacatagttgctgttgaaatttggaaactatagaaggaaacacatgaa
tacccctgacaaggacacaaagaaagggggcgactcagcactcatgggaa
taaaaaattgtttattgtagcaatggccacagttgctaagaaatcaaagg
aatttagaagaatttctgttgcttaaatagataaagaaaatcttggatgt
ggaccatgtggaattaatgtgtgcttgtgttttacatcttaatccagaaa
aaaaagtgaaatgtttcaatatcagtaaataacaagcatttgggaaaata
tatgtgcttctcttggtttaaatgtcacacagtctttacatataccatag
catcatgattcctccatttttgtgtactgtgtgtgtggatatgatgcaat
ttcttctagactgactgctgagcgttattccatcaacatttctttccctt
ttacttctctccagctataaagaaaacataaccaaaggctagtgattaag
aatagtttcttcattaacaattggacttgtataactttatgtgaaattat
aagattcatttgttgtactctaatgactgtctaagtatagaaagctcaca
ccagacagaaaaagggagacaatgatttcaagcccagtcatgttgaacat
tgactgataacctggataaacgaatgaaacaaaaatgttgagaatagttc
agaaagctatagtccggcaacatagaggatagtctgatctttagagtagc
caaacagcaaacttgtaaaagtataaatctatcttggacttttctgcaag
aacaacaaatgggaacaatattatccaatgaatttaacattgattaaata
acgtttaatgaagtaatgtctgaatttgcaagttagactaaactatctac
tgtacagttgatttctgatcaatataaaatatattcaatgagttattaag
gttttatagtgcaaatttctaccaatacttggcatagtgtacatgaataa
gac

gaattctttatttagctctgtaccccattttttaatagtattatttgttt
ctctgcagtctaacttcttgagttctttgtatatatcggatattagcctt
ctatcagatttaggaatgggaaagatctttttccaatcttttggttgcct
ttttgtcttattaacagtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtcaattcttgatcttacagaacaagccattggtatt
ctgttcaggaatttttcccctgtacccatatgttcaaggcccttccacaa
tttcttctctataagtttcagtgtctctggttttatgtggaggtttgctg
tcccataggaagaacaacaatatgaaataaccaatatctccagagctccc
ttggactaaaccaccatccaaagaaaacacatggtgggactcatatctat
agctgcatatgtagcagagtatggcctagtcggtcatcaatgggaggaga
ggcttttggtcctgtgaaggctctatgccccagtgtgggggaataccagg
gccaggaagtgggagtgggtgagttggtgaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_93279788_93280902
seq2: B6Ng01-090F20.b_49_1151

seq1  GAATTCTGTCCTGTTCTTGTAAGTTGTTTGTTTTTCTGGATCACAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCTGTTCTTGTAAGTTGTTTGTTTTTCTGGATCACAACTGA  50

seq1  AAGCCAGGAATGAATAAATAATAAATAAACATTTCATTTCTCTTTACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGAATGAATAAATAATAAATAAACATTTCATTTCTCTTTACAAT  100

seq1  ATTACATAGTTGCTGTTGAAATTTGGAAACTATAGAAGGAAACACATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATAGTTGCTGTTGAAATTTGGAAACTATAGAAGGAAACACATGAA  150

seq1  TACCCCTGACAAGGACACAAAGAAAGGGGGCGACTCAGCACTCATGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTGACAAGGACACAAAGAAAGGGGGCGACTCAGCACTCATGGGAA  200

seq1  TAAAAAATTGTTTATTGTAGCAATGGCCACAGTTGCTAAGAAATCAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTGTTTATTGTAGCAATGGCCACAGTTGCTAAGAAATCAAAGG  250

seq1  AATTTAGAAGAATTTCTGTTGCTTAAATAGATAAAGAAAATCTTGGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGAAGAATTTCTGTTGCTTAAATAGATAAAGAAAATCTTGGATGT  300

seq1  GGACCATGTGGAATTAATGTGTGCTTGTGTTTTACATCTTAATCCAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATGTGGAATTAATGTGTGCTTGTGTTTTACATCTTAATCCAGAAA  350

seq1  AAAAAGTGAAATGTTTCAATATCAGTAAATAACAAGCATTTGGGAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGAAATGTTTCAATATCAGTAAATAACAAGCATTTGGGAAAATA  400

seq1  TATGTGCTTCTCTTGGTTTAAATGTCACACAGTCTTTACATATACCATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCTTCTCTTGGTTTAAATGTCACACAGTCTTTACATATACCATAG  450

seq1  CATCATGATTCCTCCATTTTTGTGTACTGTGTGTGTGGATATGATGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGATTCCTCCATTTTTGTGTACTGTGTGTGTGGATATGATGCAAT  500

seq1  TTCTTCTAGACTGACTGCTGAGCGTTATTCCATCAACATTTCTTTCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTAGACTGACTGCTGAGCGTTATTCCATCAACATTTCTTTCCCTT  550

seq1  TTACTTCTCTCCAGCTATAAAGAAAACATAACCAAAGGCTAGTGATTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCTCTCCAGCTATAAAGAAAACATAACCAAAGGCTAGTGATTAAG  600

seq1  AATAGTTTCTTCATTAACAATTGGACTTGTATAACTTTATGTGAAATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTCTTCATTAACAATTGGACTTGTATAACTTTATGTGAAATTAT  650

seq1  AAGATTCATTTGTTGTACTCTAATGACTGTCTAAGTATAGAAAGCTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCATTTGTTGTACTCTAATGACTGTCTAAGTATAGAAAGCTCACA  700

seq1  CCAGACAGAAAAAGGGAGACAATGATTTCAAGCCCAGTCATGTTGAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAGAAAAAGGGAGACAATGATTTCAAGCCCAGTCATGTTGAACAT  750

seq1  TGACTGATAACCTGGATAAACGAATGAAACAAAAATGTTGAGAATAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATAACCTGGATAAACGAATGAAACAAAAATGTTGAGAATAGTTC  800

seq1  AGAAAGCTATAGTCCGGCAACATAGAGGATAGTCTGATCTTTAGAGTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTATAGTCCGGCAACATAGAGGATAGTCTGATCTTTAGAGTAGC  850

seq1  CAAACAGCAAACTTGTAAAAGTATAAATCTATCTT-GACTTTTCTGCAAA  899
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  CAAACAGCAAACTTGTAAAAGTATAAATCTATCTTGGACTTTTCTGC-AA  899

seq1  GAACAACAAATGGGAACAATATTATCCAATGAATTTAACATTGATTAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACAAATGGGAACAATATTATCCAATGAATTTAACATTGATTAAAT  949

seq1  AACGTTTAATGAAGTAATGTCTGAAATTTGCAAGTTAGACTAAACTATCT  999
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACGTTTAATGAAGTAATGTCTG-AATTTGCAAGTTAGACTAAACTATCT  998

seq1  ACTGTACAGTGAATTTCTGTATCACATAATAAAAATATATTCAATGAGTT  1049
      ||||||||||  ||||||| |||| |||   |||||||||||||||||||
seq2  ACTGTACAGTTGATTTCTG-ATCA-ATA--TAAAATATATTCAATGAGTT  1044

seq1  ATTAAGTTTTTATAGTGCAAAATTTCTAACCAATACTTTGGCAATAGTTG  1099
      |||||| ||||||||||| |||||||| |||||||| ||||| |||| ||
seq2  ATTAAGGTTTTATAGTGC-AAATTTCT-ACCAATAC-TTGGC-ATAG-TG  1089

seq1  TACAATGATATAAGAC  1115
      ||| |||| |||||||
seq2  TAC-ATGA-ATAAGAC  1103


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