BAC Information

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BAC

Clone NameB6Ng01-091P05
Chromosome9 (Build37)
Map Location 28,078,281 - 28,079,186
singlet/doubletsinglet
Overlap geneOpcml
Upstream geneIgsf9b, Spata19, LOC666440, LOC100041202
Downstream geneHnt, LOC625222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091P05.bB6Ng01-091P05.g
ACCDH903844DH903845
length9241,266
definitionDH903844|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P05, 5' end.DH903845|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcagcctaatagccagcaggataggacaggaaaaacctatct
ggttaatctgtcaggaccaaggcacaaactatgatcagcgccagagaagc
agttaaagaaaagctagcacacacagttaaggttgtttgctccaaatctt
gctagccttggctttggcctatgtcttcacaggccctcttgattattgac
tctatgtagagggcgttttcttagactacagggagagggacttcacatgt
gattcttttttatttttttttttttttctcatgcctgagttcctgcctgg
actccctccaaaagttggactgtaacttggaattgtaagccaaataaact
ctctccttccctactccttccctatgctgcttttatgccaggtatttttt
ttcctttttttttctttctttccattttttattaggtatttagctcattt
acatttccaatgctataccaaaagtcccccatacccacccacccccactc
ccctacccgcccactccccctttttggccctggcgttcccctgttctggg
gcatataaagtttgtgtgtccaatgggcctctctttccagtgatggccga
ctaggccatcttttgatacatatgcagctagagtcaagagctccggggta
ctggttagtttataatgttgatccacctatagggttgcagatccctttag
ctccttgggtactttctctagctcctccattgggagccctgtgatccatc
cattagctgactgtgggcatccacttctgtgtttgctaggccccagcata
ttttcacaagagacagctacatctgggtcctttcgataaaatctttgctt
agtgtatgcaatggtgtcagcgtttggatgcttgattatgggaggggtcc
cctggataagcagtctctacatgg
tatgtcaccttcaagttgagagaggtgtaagtctttccttttaatgtata
tgcattttacttacttatttctgactagtactcctggcaagaatttctag
ttctatattgaataaaagttttgagagcagaaattcttttccttgatctt
agcagaaaaaaaatccatcctttattattaaatatgatgttagctctggg
ttttgttaatgttccttagaaggctgcagaagttttttgctaataccttg
aatatttttttcaaataatattcattcatctaaaagttttttattcctct
acaaaggtagttgtcatttttaaatattctgttgatatgatgtgttcttc
ctttctgtttatttgtattttacgtgtttgaatgtattgcctacatatat
gcatgtgtagcacatgcatacctggtgcctgaagaagtcagaaaacagta
ttgaatgccctggaactggtgttacagatggttatgaactatcatgtggg
gggctgtgaactgaacccaggtcctctgcaagagtaaaaagtgtacttaa
ttgctgacccaactctccagctcctggtgtgttcatgttaaaccaagatt
gctttaccaggacaagtcacatttggtcatagtaaaaactttcacatatt
gtttgaaatttgtaatctttgccttgcatgtattagaataatattatccc
aggagaatgagtctactcacttatttctcatcctccacttctggaaagag
cttttaacaaataggtattagtttttaaatgtctggtagtttagcattca
attcaatgaccttacaatttagtttttctatatacaagtttataaaattg
ctaattacatatctctattttctgattagattatcttagtacttcttgag
tctgtgatggtaggttgtatttttcttgagttagggctacatcatttaag
tattcactacttggtacccaagtattaatagtattctcataattattatt
tctgtgaagtcctaagcaatgtcctttgacttgagcaatatccattgttt
gacgttaccagtctagaactctgctattttcttaacagtttgcctgaagt
gggttcaattttgttgaattcattttccaaaatttttatgttctaccaaa
aaaataaatgaagtttccttatagtttagtagacctaatctggtgctcgt
caaaggaagagagagtgttcacgctccctgtgatgtgagatgactactag
ggtgcctacatcatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_28078281_28079186
seq2: B6Ng01-091P05.b_48_957

seq1  GAATTCCATCAGCCTAATAGCCAGCAGGATAGGACAGGAAAAACCTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGCCTAATAGCCAGCAGGATAGGACAGGAAAAACCTATCT  50

seq1  GGTTAATCTGTCAGGACCAAGGCACAAACTATGATCAGCGCCAGAGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATCTGTCAGGACCAAGGCACAAACTATGATCAGCGCCAGAGAAGC  100

seq1  AGTTAAAGAAAAGCTAGCACACACAGTTAAGGTTGTTTGCTCCAAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGAAAAGCTAGCACACACAGTTAAGGTTGTTTGCTCCAAATCTT  150

seq1  GCTAGCCTTGGCTTTGGCCTATGTCTTCACAGGCCCTCTTGATTATTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCCTTGGCTTTGGCCTATGTCTTCACAGGCCCTCTTGATTATTGAC  200

seq1  TCTATGTAGAGGGCGTTTTCTTAGACTACAGGGAGAGGGACTTCACATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTAGAGGGCGTTTTCTTAGACTACAGGGAGAGGGACTTCACATGT  250

seq1  GATTCTTTTTTATTTTTTTTTTTTTTTCTCATGCCTGAGTTCCTGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTTTTATTTTTTTTTTTTTTTCTCATGCCTGAGTTCCTGCCTGG  300

seq1  ACTCCCTCCAAAAGTTGGACTGTAACTTGGAATTGTAAGCCAAATAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTCCAAAAGTTGGACTGTAACTTGGAATTGTAAGCCAAATAAACT  350

seq1  CTCTCCTTCCCTACTCCTTCCCTATGCTGCTTTTATGCCAGGTATTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTCCCTACTCCTTCCCTATGCTGCTTTTATGCCAGGTATTTTTT  400

seq1  TTCCTTTTTTTTTCTTTCTTTCCATTTTTTATTAGGTATTTAGCTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTTTTTCTTTCTTTCCATTTTTTATTAGGTATTTAGCTCATTT  450

seq1  ACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTC  500

seq1  CCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTTCTGGG  550
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCCGCCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTTCTGGG  550

seq1  GCATATAAAGTTTGTGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAAAGTTTGTGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGA  600

seq1  CTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTA  650

seq1  CTGGTTAGTTTATAATGTTGATCCACCTATAGGGTTGCAGATCCCTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTAGTTTATAATGTTGATCCACCTATAGGGTTGCAGATCCCTTTAG  700

seq1  CTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATC  750

seq1  CATTAGCTGACTGTGGGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTGACTGTGGGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATA  800

seq1  GTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATC-TTGC-T  848
       | |||||||||||||||||||||||||||||||||||||||| |||| |
seq2  TTTTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTTGCTT  850

seq1  AGTGTATGCAATGGTGTCAGCGTTTGGATGC-TGATTATGGG-GTGGATC  896
      ||||||||||||||||||||||||||||||| |||||||||| | ||  |
seq2  AGTGTATGCAATGGTGTCAGCGTTTGGATGCTTGATTATGGGAGGGGTCC  900

seq1  CCTGGATAAG  906
      ||||||||||
seq2  CCTGGATAAG  910