BAC Information

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BAC

Clone NameB6Ng01-093G23
Chromosome9 (Build37)
Map Location 113,666,607 - 113,796,477
singlet/doubletdoublet
Overlap geneClasp2
Upstream geneEG622110, LOC100039391, LOC100043801, LOC100043802, LOC636680, Pdcd6ip
Downstream geneUbp1, Fbxl2, Susd5, EG665719, 4921528I07Rik, Bcl2a1c, 4930520O04Rik, Crtap, Glb1, Ccr4, Trim71, LOC100043808, Cnot10, LOC665772, Dync1li1, Cmtm6, Cmtm7, Cmtm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093G23.bB6Ng01-093G23.g
ACCDH904929DH904930
length5911,081
definitionDH904929|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G23, 5' end.DH904930|Mus musculus domesticus DNA, BAC clone: B6Ng01-093G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,795,881 - 113,796,477)(113,666,607 - 113,667,691)
sequence
ttcaggaaagaaacacgtatctgggttcttacaattgaggcagcttcttt
tcatggaagcctgctttattttaggtgtgccagccatcaaatgtgaaaca
gaagaacataatcaaattagatcaattagtagattaaaagcacatctcca
aacagaatgacagcctgcgtaactgcgaatagcatttcgtggattgcaaa
gggtccaacactgcacggactcttaaggagagaaaacagagaaaatgggt
taattccacagtcatgcagtaaagttagcttttcaacaaatattgaacca
acttactctctagtgagagttccaacacaggggacagcatgcaaaaagga
aaaaagaaaaaaaagaaaaacacacaaattagtcgccatcaatgcaaagt
tcctgtatgggagaaaaacactgaagaaaataaaagtagctacaaatgtt
tttcaaagttttctgaaaaaactcaaaatatttttaaaacaagagttcca
tgtacaacatagaggaaaggcacgtgatttctctgcacgcttcattcatt
ttcttgtcaaggaaatttaaaaggggggaggggtggaggag
gaattcaaacaaaacaaaacaaaacaaaacaaaacaaaaaaaagaaaaaa
agaaaaaaagaaaaaagaaaagaaaaacccaacccacatacctgtaactg
ttaacacaaaatttttcatgcttctttatttaaatgttcatttttccccc
taacaggaatacttgaaacaatgtttgtgccctctgactaaaattgtcct
aaaattcttttaaacttcaaaaatcatatttaatctattcccataggcca
aaccaactatgttaataaccattatttaatccttaattaacaaccagtct
ccttatacaaacaagctattgctgcttatcccagatatataattaacatg
gtattttcttcttcagccatccaacgcagataaatcctcaactcttccct
ctgatttccctagtacaacacacttaaaggattccctccagggctaaatt
cctcaacaccctggcctcctttctaggactattacaacagaccatgatat
gctcccaagcaaactgttacaggcttaacatatacactgtccaccctgtg
cagacaccccctgctgggttctgctcccaagttgtgattactctacaggt
ttatctctacaaaagggaaaaagtgagctgttgccacaggccatctcctt
ggacctacctctgcaataaagctgcctttgtccagacacatcatctgact
gaagacttccgagataagcagatgctgagagcttcgggaccttccagcca
cagatgaactctcttgccagtctaatggctaccgaacttggggaaactta
catgatctctatatagataaatcaatattgtttaaaattggtgttaataa
cctcaacaaactctgtacaaactcactctcatttccattcactgaacagt
taattaatccaatatccccttgtctcctagccccctcccctctggcttat
gttgtgttttgttttgatgcttaccccaactacctcaccacctttctcca
ccacaataacaggtccttccaatggaacccttccctttatcaaaaaaaag
gaaggagagaaactcgtggaagactgccggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_113795881_113796477
seq2: B6Ng01-093G23.b_43_639 (reverse)

seq1  CTCCTCCACCCCTCCCCCCTTTTAAATTTCCTTGACAAGAAAATGAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCACCCCTCCCCCCTTTTAAATTTCCTTGACAAGAAAATGAATGA  50

seq1  AGCGTGCAGAGAAATCACGTGCCTTTCCTCTATGTTGTACATGGAACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGCAGAGAAATCACGTGCCTTTCCTCTATGTTGTACATGGAACTCT  100

seq1  TGTTTTAAAAATATTTTGAGTTTTTTCAGAAAACTTTGAAAAACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAAAAATATTTTGAGTTTTTTCAGAAAACTTTGAAAAACATTTGT  150

seq1  AGCTACTTTTATTTTCTTCAGTGTTTTTCTCCCATACAGGAACTTTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTTTTATTTTCTTCAGTGTTTTTCTCCCATACAGGAACTTTGCAT  200

seq1  TGATGGCGACTAATTTGTGTGTTTTTCTTTTTTTTCTTTTTTCCTTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCGACTAATTTGTGTGTTTTTCTTTTTTTTCTTTTTTCCTTTTTG  250

seq1  CATGCTGTCCCCTGTGTTGGAACTCTCACTAGAGAGTAAGTTGGTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTCCCCTGTGTTGGAACTCTCACTAGAGAGTAAGTTGGTTCAAT  300

seq1  ATTTGTTGAAAAGCTAACTTTACTGCATGACTGTGGAATTAACCCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTGAAAAGCTAACTTTACTGCATGACTGTGGAATTAACCCATTTT  350

seq1  CTCTGTTTTCTCTCCTTAAGAGTCCGTGCAGTGTTGGACCCTTTGCAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTCTCTCCTTAAGAGTCCGTGCAGTGTTGGACCCTTTGCAATC  400

seq1  CACGAAATGCTATTCGCAGTTACGCAGGCTGTCATTCTGTTTGGAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAATGCTATTCGCAGTTACGCAGGCTGTCATTCTGTTTGGAGATGT  450

seq1  GCTTTTAATCTACTAATTGATCTAATTTGATTATGTTCTTCTGTTTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAATCTACTAATTGATCTAATTTGATTATGTTCTTCTGTTTCACA  500

seq1  TTTGATGGCTGGCACACCTAAAATAAAGCAGGCTTCCATGAAAAGAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGCTGGCACACCTAAAATAAAGCAGGCTTCCATGAAAAGAAGCT  550

seq1  GCCTCAATTGTAAGAACCCAGATACGTGTTTCTTTCCTGAAGAATTC  597
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAATTGTAAGAACCCAGATACGTGTTTCTTTCCTGAAGAATTC  597

seq1: chr9_113666607_113667691
seq2: B6Ng01-093G23.g_66_1146

seq1  GAATTCAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAAGAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAAGAAAAAA  50

seq1  AGAAAAAAAGAAAAAAGAAAAGAAAAACCCAACCCACATACCTGTAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAGAAAAAAGAAAAGAAAAACCCAACCCACATACCTGTAACTG  100

seq1  TTAACACAAAATTTTTCATGCTTCTTTATTTAAATGTTCATTTTTCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACAAAATTTTTCATGCTTCTTTATTTAAATGTTCATTTTTCCCCC  150

seq1  TAACAGGAATACTTGAAACAATGTTTGTGCCCTCTGACTAAAATTGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGAATACTTGAAACAATGTTTGTGCCCTCTGACTAAAATTGTCCT  200

seq1  AAAATTCTTTTAAACTTCAAAAATCATATTTAATCTATTCCCATAGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTTTAAACTTCAAAAATCATATTTAATCTATTCCCATAGGCCA  250

seq1  AACCAACTATGTTAATAACCATTATTTAATCCTTAATTAACAACCAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACTATGTTAATAACCATTATTTAATCCTTAATTAACAACCAGTCT  300

seq1  CCTTATACAAACAAGCTATTGCTGCTTATCCCAGATATATAATTAACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATACAAACAAGCTATTGCTGCTTATCCCAGATATATAATTAACATG  350

seq1  GTATTTTCTTCTTCAGCCATCCAACGCAGATAAATCCTCAACTCTTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTTCTTCAGCCATCCAACGCAGATAAATCCTCAACTCTTCCCT  400

seq1  CTGATTTCCCTAGTACAACACACTTAAAGGATTCCCTCCAGGGCTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCCTAGTACAACACACTTAAAGGATTCCCTCCAGGGCTAAATT  450

seq1  CCTCAACACCCTGGCCTCCTTTCTAGGACTATTACAACAGACCATGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACACCCTGGCCTCCTTTCTAGGACTATTACAACAGACCATGATAT  500

seq1  GCTCCCAAGCAAACTGTTACAGGCTTAACATATACACTGTCCACCCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAAGCAAACTGTTACAGGCTTAACATATACACTGTCCACCCTGTG  550

seq1  CAGACACCCCCTGCTGGGTTCTGCTCCCAAGTTGTGATTACTCTACAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACCCCCTGCTGGGTTCTGCTCCCAAGTTGTGATTACTCTACAGGT  600

seq1  TTATCTCTACAAAAGGGAAAAAGTGAGCTGTTGCCACAGGCCATCTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTACAAAAGGGAAAAAGTGAGCTGTTGCCACAGGCCATCTCCTT  650

seq1  GGACCTACCTCTGCAATAAAGCTGCCTTTGTCCAGACACATCATCTGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTACCTCTGCAATAAAGCTGCCTTTGTCCAGACACATCATCTGACT  700

seq1  GAAGACTTCCGAGATAAGCAGATGCTGAGAGCTTCGGGACCTTCCAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTTCCGAGATAAGCAGATGCTGAGAGCTTCGGGACCTTCCAGCCA  750

seq1  CAGATGAACTCTCTTGCCAGTCTAATGGCTACCGAACTTGGGGAAACTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAACTCTCTTGCCAGTCTAATGGCTACCGAACTTGGGGAAACTTA  800

seq1  CATGATCTCTATATAGATAAATCAAATATTGTTTAAAAATTGGTGTTAAT  850
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  CATGATCTCTATATAGATAAATC-AATATTGTTT-AAAATTGGTGTTAAT  848

seq1  AACCTC-ACAAACTCTGTACAAACTCACTCTCAATTTCAATCCACTGAAC  899
      |||||| ||||||||||||||||||||||||| ||||| || ||||||||
seq2  AACCTCAACAAACTCTGTACAAACTCACTCTC-ATTTCCATTCACTGAAC  897

seq1  AGTTAATTAATCCAATAATCCCTTGTCTTCCTAGCCCCCTCCCCTCTGGC  949
      |||||||||||||||||  |||||||| ||||||||||||||||||||||
seq2  AGTTAATTAATCCAATATCCCCTTGTC-TCCTAGCCCCCTCCCCTCTGGC  946

seq1  TTATGTTGTGTTTTGTTTTGATGCTTACACCCCACCCCACCCCACCCCAC  999
      ||||||||||||||||||||||||||  ||||||  | ||| |||| | |
seq2  TTATGTTGTGTTTTGTTTTGATGCTT--ACCCCA-ACTACCTCACCAC-C  992

seq1  ATTCT-CACCACAAATAACA-GTCACTCCAAT-GACACCTCTCCTTTATC  1046
       |||| |||||| ||||||| |||  |||||| ||  |||  ||||||||
seq2  TTTCTCCACCAC-AATAACAGGTCCTTCCAATGGAACCCTTCCCTTTATC  1041

seq1  AAAAAGAAAAGGAGGGAG---GAGTCGTGGAGCAGTGCCGGG  1085
      ||||  ||||||| ||||    | |||||||  | |||||||
seq2  AAAA--AAAAGGAAGGAGAGAAACTCGTGGAAGACTGCCGGG  1081