BAC Information

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BAC

Clone NameB6Ng01-095D15
Chromosome9 (Build37)
Map Location 26,020,826 - 26,126,486
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666297, 9130004C02Rik, Sept7, EG666327, 2310005P05Rik
Downstream geneB3gat1, BC038479, Glb1l3, Gm1110, LOC330907, Acad8, Thyn1, Vps26b, Ncapd3, Jam3, Igsf9b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095D15.bB6Ng01-095D15.g
ACCDH906226DH906227
length1,1581,198
definitionDH906226|Mus musculus domesticus DNA, BAC clone: B6Ng01-095D15, 5' end.DH906227|Mus musculus domesticus DNA, BAC clone: B6Ng01-095D15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,020,826 - 26,022,002)(26,125,272 - 26,126,486)
sequence
gaattcagaattatcttttctaaaaacaccaatagtttgccaagcatttg
ttttagcttttctttaaaagccaagtagcagtctatagtgaacatcagaa
cccagatttttgtcaatttggagactttttattgttattttaatcttctt
gcttataataggtctatttaaattgattattttggtttgacctaactgtg
gtaggtcatatttatagggaaatttatacacttctatttggtttttaaat
ttgatagagtatagaattttaggtatgtctttgtgcttgtttgtttgttt
gtttgtttgttccactggttgtgttataatatatccctttccatgtctaa
ttttattcattggtttctctctctttctttggttgacttggctttgagct
tgtcaattttaaacatctttaaaagaatatattctttgtttcatcaatta
attatgtattctaaattctgtttcattcatttattctgtgatttagttat
actttattatttcctattttgtttatttttgagcttctaatttaattaga
acacttcttcctttcttttcctctatccaagctctcccatatattccctc
tttcccctttaaactcatagtctctttttttaatcagttgttattgtctt
catatatgtatatgcatatattcttaaatttaatctgttgaaaccatgta
atgttactaaagtgttttcagggttgacagcttgacacttgacagtcagt
tggtgtgttctttcctggggaagactatctctcttcctcccagatttatt
cagttgcctataatacattgtgtatggtagatgcttctttggatttttcc
tttccagcttggcacattcattgtgtcagtcttgttcagctcatatttga
gcagtcatgttgatgagactttacaaggtatggattttgatgctcttagg
agaacaaacttcaagattattgggctcatcaagtacaataatttcctgca
caaatatccttggttataatcataagcataaacgattagtaaacctttct
agaatatctgtgaaatactagaagaattatggtacagcacgttctaagat
actaattaatatctagaaagaatgaagaagaccttgaatatgaggtgtag
ggacatac
gaattctcctctaggaggaagccaggatcctgggttgcttcctttatctc
tgttttatgctacagagacaatttttatttgagtcttaactgaaaaaaaa
tgaggaaattagtgatcttccaatttcaaaggagtaaatggtctcaacag
ctttgtgggtgaggagagtaatgtcacccgtagccctgcacctagcatga
gagaatttcttgtccccaatgccattcctttggcaggtttagagtaaagg
tcttttgtattttccccatctggtatttaacttcaaggtctggcttctga
atacatgctacacacattacaaaatttaaaggacaacaggacatgtttgg
gatggaagcaaggaggtgggggaacaagtatttctttttagaaatttgcc
ccattcctgtcagagtttcagtaggttaatggagcatatactaacattgg
aagttcaagttaggaccctgaggaacactgtattcattcttgcttcctgg
aatcatcctgtttctgatgatcatggagtctttaacttagacaatgagaa
cattcctcgatggatggaggaacatgaagtatgtacatcattatctaaac
aagctttacatctaagccaagcatcagccctggaggagacccatatcttg
ctggctctgttccagtgatgagaaccatgccacactgtcctttctgcacc
catgccggacccaacagaattccttttatgagagaaatccaagagaataa
ggataggttccataattcctttccaagccacattctaatagtaccaacta
tttttacttatggggctatcagtattaaaagtatgttctgtggcctaaat
tagctttgtttgaattttctggacatagtcattgtagtaaaatgttttaa
atgtggaaagtttatctttcttcaactgaattgcttttgtagctttgaaa
aaagtgtgtgttgacttatttgatttatttacatgctgtttctgtttcac
tgacctgtgcattaatctctgtcattacaatactgtctgattattgtaga
tgcattaggatcttaatatagtgagatagtctttccaattatattctatt
tcaatatgtgtcagctattttacatctctggatttctaatatagttcaga
atgtattggctcaatcctatccacctgctgagaatcttatacaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_26020826_26022002
seq2: B6Ng01-095D15.b_44_1201

seq1  GAATTCAGAATTATCTTTTCTAAAAACA-GAATAGTTTGCCAAGCATTTG  49
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  GAATTCAGAATTATCTTTTCTAAAAACACCAATAGTTTGCCAAGCATTTG  50

seq1  TTTTAGCTTTTCTTTAAAAGCCAAGTAGCAGTCTATAGTGAACATCAGAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCTTTTCTTTAAAAGCCAAGTAGCAGTCTATAGTGAACATCAGAA  100

seq1  CCCAGATTTTTGTCAATTTGGAGACTTTTTATTGTTATTTTAATCTTCTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATTTTTGTCAATTTGGAGACTTTTTATTGTTATTTTAATCTTCTT  150

seq1  GCTTATAATAGGTCTATTTAAATTGATTATTTTGGTTTGACCTAACTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAATAGGTCTATTTAAATTGATTATTTTGGTTTGACCTAACTGTG  200

seq1  GTAGGTCATATTTATAGGGAAATTTATACACTTCTATTTGGTTTTTAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCATATTTATAGGGAAATTTATACACTTCTATTTGGTTTTTAAAT  250

seq1  TTGATAGAGTATAGAATTTTAGGTATGTCTTTGTGCTTGTTTGTTTGTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGAGTATAGAATTTTAGGTATGTCTTTGTGCTTGTTTGTTTGTTT  300

seq1  GTTTGTTTGTTCCACTGGTTGTGTTATAATATATCCCTTTCCATGTCTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTCCACTGGTTGTGTTATAATATATCCCTTTCCATGTCTAA  350

seq1  TTTTATTCATTGGTTTCTCTCTCTTTCTTTGGTTGACTTGGCTTTGAGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCATTGGTTTCTCTCTCTTTCTTTGGTTGACTTGGCTTTGAGCT  400

seq1  TGTCAATTTTAAACATCTTTAAAAGAATATATTCTTTGTTTCATCAATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATTTTAAACATCTTTAAAAGAATATATTCTTTGTTTCATCAATTA  450

seq1  ATTATGTATTCTAAATTCTGTTTCATTCATTTATTCTGTGATTTAGTTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTATTCTAAATTCTGTTTCATTCATTTATTCTGTGATTTAGTTAT  500

seq1  ACTTTATTATTTCCTATTTTGTTTATTTTTGAGCTTCTAATTTAATTAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTATTTCCTATTTTGTTTATTTTTGAGCTTCTAATTTAATTAGA  550

seq1  ACACTTCTTCCTTTCTTTTCCTCTATCCAAGCTCTCCCATATATTCCCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCTTCCTTTCTTTTCCTCTATCCAAGCTCTCCCATATATTCCCTC  600

seq1  TTTCCCCTTTAAACTCATAGTCTCTTTTTTTAATCAGTTGTTATTGTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTTTAAACTCATAGTCTCTTTTTTTAATCAGTTGTTATTGTCTT  650

seq1  CATATATGTATATGCATATATTCTTAAATTTAATCTGTTGAAACCATGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGTATATGCATATATTCTTAAATTTAATCTGTTGAAACCATGTA  700

seq1  ATGTTACTAAAGTGTTTTCAGGGTTGACAGCTTGACACTTGACAGTCAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACTAAAGTGTTTTCAGGGTTGACAGCTTGACACTTGACAGTCAGT  750

seq1  TGGTGTGTTCTTTCCTGGGGAAGACTATCTCTCTTCCTCCCAGATTTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTTCTTTCCTGGGGAAGACTATCTCTCTTCCTCCCAGATTTATT  800

seq1  CAGTTGCCTATAATACATTGTGTATGGTAGATGCTTCTTTGGATTTTTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCCTATAATACATTGTGTATGGTAGATGCTTCTTTGGATTTTTCC  850

seq1  TTTCCAGCTTGGCACATTCATTGTGTCAGTCTTGTTCAGCTCATATTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCTTGGCACATTCATTGTGTCAGTCTTGTTCAGCTCATATTTGA  900

seq1  GCAGTCATGTTGATGAGACTTTAC-AGGTATGGATTTTGATGCTCTTAGG  948
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCAGTCATGTTGATGAGACTTTACAAGGTATGGATTTTGATGCTCTTAGG  950

seq1  AG-ACAAACTTCAAGATTATTGGGCTCATCAAGTACAATATTTCCTTGCA  997
      || ||||||||||||||||||||||||||||||||||||| || | ||| 
seq2  AGAACAAACTTCAAGATTATTGGGCTCATCAAGTACAATAATTTCCTGC-  999

seq1  ACAAATATCCTTGGTTAATAATCTATTAGCTATAAAACAGATTAGTAAAC  1047
      |||||||||||||||| |||||| || ||| |||||   |||||||||||
seq2  ACAAATATCCTTGGTT-ATAATC-ATAAGC-ATAAA--CGATTAGTAAAC  1044

seq1  ACTTCTAGAATATCTTGTAGAACATACTAAGAAAGAAATTATGGTAACAG  1097
        |||||||||||| ||| ||| ||||| ||||   ||||||||| ||||
seq2  CTTTCTAGAATATC-TGT-GAA-ATACT-AGAA--GAATTATGGT-ACAG  1087

seq1  CACCATTCATAAGATAACTATATAAATACTGAAGAAAGAAATTGAAGAAG  1147
      || | ||| |||||| |||| || |||| |  ||||||||  ||||||||
seq2  CA-CGTTC-TAAGAT-ACTA-ATTAATA-TCTAGAAAGAA--TGAAGAAG  1130

seq1  ACACTAGAATATGAGGGGTAGGGGACATAC  1177
      || || |||||||||| ||| |||||||||
seq2  AC-CTTGAATATGAGGTGTA-GGGACATAC  1158

seq1: chr9_26125272_26126486
seq2: B6Ng01-095D15.g_69_1266 (reverse)

seq1  CCTTTTGTATAAAGATCTCAGCAAGGTGGATTATGGATTGAGACAATATC  50
      ||||||||||||   ||||||| ||||||||   |||||||| ||||| |
seq2  CCTTTTGTATAAGATTCTCAGC-AGGTGGAT--AGGATTGAGCCAATA-C  46

seq1  ATTCTGAAATTTATATAGAAATTCAGAGATGTTAAAATAGCTGAAACATA  100
      |||||||| | ||| ||||||| |||||||| |||||||||||| |||||
seq2  ATTCTGAACTATAT-TAGAAATCCAGAGATG-TAAAATAGCTGACACATA  94

seq1  TTTGAAATAGAATAATAAATTGGAAAGACTAATCTCACCTATTATTAAGA  150
       |||||||||||||   ||||||||||||| |||||| ||| ||||||||
seq2  -TTGAAATAGAATA--TAATTGGAAAGACT-ATCTCA-CTA-TATTAAGA  138

seq1  TC--TATGCATCTACAATAATCAAGACAGTATTGTATTGACAGAAGAATA  198
      ||   ||||||||||||||||| ||||||||||||| |||||||   || 
seq2  TCCTAATGCATCTACAATAATC-AGACAGTATTGTAATGACAGA--GATT  185

seq1  AATGCACAGGTCAGTGAAACAGAAAACAGCATGTAAATAAAATCAAATAA  248
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  AATGCACAGGTCAGTGAAACAG-AAACAGCATGTAAAT-AAATCAAATAA  233

seq1  GTCAACACACACTTTTTTCAAAGCTACAAAAGCAATTCAGTTGAAGAAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACACACACTTTTTTCAAAGCTACAAAAGCAATTCAGTTGAAGAAAG  283

seq1  ATAAACTTTCCACATTTAAAACATTTGTACTACAATGACTATGTCAAGAA  348
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  ATAAACTTTCCACATTTAAAACATTT-TACTACAATGACTATGTCCAGAA  332

seq1  AATTCAAACAAAAGCTAATGTAGGCCACAGAACATACTTTTAATACTGAA  398
      ||||||||| ||||||||| |||||||||||||||||||||||||||| |
seq2  AATTCAAAC-AAAGCTAATTTAGGCCACAGAACATACTTTTAATACTG-A  380

seq1  TAGCCCCATAAGT-AAAATAGTTGGTACTATTAGAATGTGGCTTGGAAAG  447
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCATAAGTAAAAATAGTTGGTACTATTAGAATGTGGCTTGGAAAG  430

seq1  GAATTATGGAACCTATCCTTATTCTCTTGGATTTCTCTCATAAAAGGAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGGAACCTATCCTTATTCTCTTGGATTTCTCTCATAAAAGGAAT  480

seq1  TCTGTTGGGTCCGGCATGGGTGCAGAAAGGACAGTGTGGCATGGTTCTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGGTCCGGCATGGGTGCAGAAAGGACAGTGTGGCATGGTTCTCA  530

seq1  TCACTGGAACAGAGCCAGCAAGATATGGGTCTCCTCCAGGGCTGATGCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAACAGAGCCAGCAAGATATGGGTCTCCTCCAGGGCTGATGCTT  580

seq1  GGCTTAGATGTAAAGCTTGTTTAGATAATGATGTACATACTTCATGTTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGATGTAAAGCTTGTTTAGATAATGATGTACATACTTCATGTTCC  630

seq1  TCCATCCATCGAGGAATGTTCTCATTGTCTAAGTTAAAGACTCCATGATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCATCGAGGAATGTTCTCATTGTCTAAGTTAAAGACTCCATGATC  680

seq1  ATCAGAAACAGGATGATTCCAGGAAGCAAGAATGAATACAGTGTTCCTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAACAGGATGATTCCAGGAAGCAAGAATGAATACAGTGTTCCTCA  730

seq1  GGGTCCTAACTTGAACTTCCAATGTTAGTATATGCTCCATTAACCTACTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTAACTTGAACTTCCAATGTTAGTATATGCTCCATTAACCTACTG  780

seq1  AAACTCTGACAGGAATGGGGCAAATTTCTAAAAAGAAATACTTGTTCCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGACAGGAATGGGGCAAATTTCTAAAAAGAAATACTTGTTCCCC  830

seq1  CACCTCCTTGCTTCCATCCCAAACATGTCCTGTTGTCCTTTAAATTTTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTTGCTTCCATCCCAAACATGTCCTGTTGTCCTTTAAATTTTGT  880

seq1  AATGTGTGTAGCATGTATTCAGAAGCCAGACCTTGAAGTTAAATACCAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGTAGCATGTATTCAGAAGCCAGACCTTGAAGTTAAATACCAGA  930

seq1  TGGGGAAAATACAAAAGACCTTTACTCTAAACCTGCCAAAGGAATGGCAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAAATACAAAAGACCTTTACTCTAAACCTGCCAAAGGAATGGCAT  980

seq1  TGGGGACAAGAAATTCTCTCATGCTAGGTGCAGGGCTACGGGTGACATTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAAGAAATTCTCTCATGCTAGGTGCAGGGCTACGGGTGACATTA  1030

seq1  CTCTCCTCACCCACAAAGCTGTTGAGACCATTTACTCCTTTGAAATTGGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCACCCACAAAGCTGTTGAGACCATTTACTCCTTTGAAATTGGA  1080

seq1  AGATCACTAATTTCCTCATTTTTTTTCAGTTAAGACTCAAATAAAAATTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTAATTTCCTCATTTTTTTTCAGTTAAGACTCAAATAAAAATTG  1130

seq1  TCTCTGTAGCATAAAACAGAGATAAAGGAAGCAACCCAGGATCCTGGCTT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTAGCATAAAACAGAGATAAAGGAAGCAACCCAGGATCCTGGCTT  1180

seq1  CCTCCTAGAGGAGAATTC  1215
      ||||||||||||||||||
seq2  CCTCCTAGAGGAGAATTC  1198