BAC Information

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BAC

Clone NameB6Ng01-095P24
Chromosome9 (Build37)
Map Location 8,162,262 - 8,163,398
singlet/doubletsinglet
Overlap genenone
Upstream geneDync2h1, Dcun1d5, Mmp13, Mmp12, Mmp1b, Mmp3, Mmp1a, Mmp10, Mmp8, Mmp27, Mmp20, Mmp7, LOC665057, LOC100039782, Tmem123, Birc2, Birc3, Yap1, EG665090, 9230110C19Rik, AK129341, LOC100039855, 1700018P22Rik, LOC665108
Downstream gene1700128F08Rik, Trpc6, Pgr, 9030420J04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095P24.bB6Ng01-095P24.g
ACCDH906785DH906786
length1,1231,140
definitionDH906785|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P24, 5' end.DH906786|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatataaaaattccaagcaaataactgtttctgagcctcatctat
gtgttcctaggtttttttattagaagggcgagggaacaggcagggattga
gcctctccttgctcttgttatgagcaaaagcactgttacatgtttcttta
caatgacttactctaccacctcttctcagtggttgcaaagtgtagcagag
catgaactcccatgtcagactggccctgagtctacatgatgctatgtcat
tgctattagtttcctcatcagtaagttgaaagtccttgtcttcctcattg
cagtcagcaataccagacagaaagcaactcaaagaagagaaggtttataa
tagggctcacagttggaaatccactatacagtggtgaggagccttggcag
ctggagtgttaggcagctgaccacactgcatctgcattcaggaagcagag
aggagtgcaggggctcagcttgcctcctccttttttgtcagtctgggatt
ccaattcatgaacatggtgtcacccaagtgcaagttgcatctttcttctt
cataaccttctggagactacctcatgtacacatccctaagttttgaatta
aggtacctctaaagccagacaagttaccatgaatgctagttaacttttgc
agttttacagagtggctgtgaggggtgaatgagtaagtcacaaaaagttc
agaaaatttgtgtgatgcacagcaagaacaacatagagacttgactcata
ccatcagcatcaggtggagaacatgacatacaaacacacaatcccaagta
ggctggtcacacttatggaagtgatgagaaagcacatgctttgctgtagg
tccatcactcactgtaggcttctcccacccctctgagcatttataagaat
gtctcttcacagttcataatgcaagcaacaaaaccaggtctcccagaaac
aaaggaaggaacaacattttatacctagattttgttgagatgtttctaca
ggtaatgtgtgtagctgctttttaaacctcagaaaatgctatggagcagt
agcactgttattctataatagttaaatattctagtttcagtgatagccca
gtgtctggcctaggaaggtagtt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctagtaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaacatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaagacccatggaaggagttacagagccaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggtctagcaaac
acagaagtggatgctcacagtcagctatggatggatcatagggctccaat
ggagagctagagaaagtagcaagagctaaagggatctgcaacctatagtg
acaacattatgactacagtacccggagctcttgactctagctgcatatat
atcaagatggctagtcggcatcctggagaagagccattgacttgcaaact
tttatgtcccagtacaggaacacaagggccaaaaagtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_8162262_8163398
seq2: B6Ng01-095P24.b_49_1171

seq1  GAATTCATATAAAAATTCCAAGCAAATAACTGTTTCTGAGCCTCATCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAAAAATTCCAAGCAAATAACTGTTTCTGAGCCTCATCTAT  50

seq1  GTGTTCCTAGGTTTTTTTATTAGAAGGGCGAGGGAACAGGCAGGGATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTAGGTTTTTTTATTAGAAGGGCGAGGGAACAGGCAGGGATTGA  100

seq1  GCCTCTCCTTGCTCTTGTTATGAGCAAAAGCACTGTTACATGTTTCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCTTGCTCTTGTTATGAGCAAAAGCACTGTTACATGTTTCTTTA  150

seq1  CAATGACTTACTCTACCACCTCTTCTCAGTGGTTGCAAAGTGTAGCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACTTACTCTACCACCTCTTCTCAGTGGTTGCAAAGTGTAGCAGAG  200

seq1  CATGAACTCCCATGTCAGACTGGCCCTGAGTCTACATGATGCTATGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTCCCATGTCAGACTGGCCCTGAGTCTACATGATGCTATGTCAT  250

seq1  TGCTATTAGTTTCCTCATCAGTAAGTTGAAAGTCCTTGTCTTCCTCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTAGTTTCCTCATCAGTAAGTTGAAAGTCCTTGTCTTCCTCATTG  300

seq1  CAGTCAGCAATACCAGACAGAAAGCAACTCAAAGAAGAGAAGGTTTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCAATACCAGACAGAAAGCAACTCAAAGAAGAGAAGGTTTATAA  350

seq1  TAGGGCTCACAGTTGGAAATCCACTATACAGTGGTGAGGAGCCTTGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTCACAGTTGGAAATCCACTATACAGTGGTGAGGAGCCTTGGCAG  400

seq1  CTGGAGTGTTAGGCAGCTGACCACACTGCATCTGCATTCAGGAAGCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGTTAGGCAGCTGACCACACTGCATCTGCATTCAGGAAGCAGAG  450

seq1  AGGAGTGCAGGGGCTCAGCTTGCCTCCTCCTTTTTTGTCAGTCTGGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGCAGGGGCTCAGCTTGCCTCCTCCTTTTTTGTCAGTCTGGGATT  500

seq1  CCAATTCATGAACATGGTGTCACCCAAGTGCAAGTTGCATCTTTCTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCATGAACATGGTGTCACCCAAGTGCAAGTTGCATCTTTCTTCTT  550

seq1  CATAACCTTCTGGAGACTACCTCATGTACACATCCCTAAGTTTTGAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCTTCTGGAGACTACCTCATGTACACATCCCTAAGTTTTGAATTA  600

seq1  AGGTACCTCTAAAGCCAGACAAGTTACCATGAATGCTAGTTAACTTTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCTCTAAAGCCAGACAAGTTACCATGAATGCTAGTTAACTTTTGC  650

seq1  AGTTTTACAGAGTGGCTGTGAGGGGTGAATGAGTAAGTCACAAAAAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACAGAGTGGCTGTGAGGGGTGAATGAGTAAGTCACAAAAAGTTC  700

seq1  AGAAAATTTGTGTGATGCACAGCAAGAACAACATAGAGACTTGACTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTTGTGTGATGCACAGCAAGAACAACATAGAGACTTGACTCATA  750

seq1  CCATCAGCATCAGGTGGAGAACATGACATACAAACACACAATCCCAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGCATCAGGTGGAGAACATGACATACAAACACACAATCCCAAGTA  800

seq1  GGCTGGTCACACTTATGG-AGTGATGAGAAAGCACATGCTTTGCTGTAGG  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGCTGGTCACACTTATGGAAGTGATGAGAAAGCACATGCTTTGCTGTAGG  850

seq1  TCCATCACTCACTGTAGGCTTCTCCCACCCCTCTGAGCATTTATAAGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACTCACTGTAGGCTTCTCCCACCCCTCTGAGCATTTATAAGAAT  900

seq1  GTCTCTTCACAGTTCATAATGCAAGCAACAAAACCAGGTCTCCCAGAAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTCACAGTTCATAATGCAAGCAACAAAACCAGGTCTCCCAGAAAC  950

seq1  AAAGGGAAGGGGAACAACATTTTATACCTAGATTTTTGTTGAGATGTTTT  999
      ||||| |   |||||||||||||||||||||| ||||||||||||| |||
seq2  AAAGGAA---GGAACAACATTTTATACCTAGA-TTTTGTTGAGATG-TTT  995

seq1  CTACAGGTTAATGTGTGGTAAGCTGCTTTTTAAACCTCCAGAAAATGCTA  1049
      ||||||| |||||||||   ||||||||||||||||| ||||||||||||
seq2  CTACAGG-TAATGTGTG--TAGCTGCTTTTTAAACCT-CAGAAAATGCTA  1041

seq1  TGAAGCAGTTAGCACTGTTATTCCTATATTAGGTAAATATTCTAAGGTTT  1099
      || ||||| ||||||||||||| ||||| ||| |||||||||||  ||||
seq2  TGGAGCAG-TAGCACTGTTATT-CTATAATAGTTAAATATTCTA--GTTT  1087

seq1  CCAGTGGTTAGCCAGTGGTTCCTGGCTAGGAA-GTAGTT  1137
       ||||| |   ||||||  ||  | ||||||| ||||||
seq2  -CAGTGATAGCCCAGTG--TCTGGCCTAGGAAGGTAGTT  1123