BAC Information

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BAC

Clone NameB6Ng01-096C12
Chromosome9 (Build37)
Map Location 19,261,176 - 19,262,302
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp558, Mbd3l1, Muc16, Olfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849
Downstream geneOlfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560, 4921534A09Rik, EG624824, Zfp26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096C12.bB6Ng01-096C12.g
ACCDH906898DH906899
length1,1231,231
definitionDH906898|Mus musculus domesticus DNA, BAC clone: B6Ng01-096C12, 5' end.DH906899|Mus musculus domesticus DNA, BAC clone: B6Ng01-096C12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccctaatacgctttaaattgggacttcaagctcacctgtagaat
cctagcaggttggattctactgaaatctgcattgtagcaaaggcagtaaa
ctcagtcctttgactcatcaaagctggaggacccaatatgattttgggtt
aaaagctctttcctctttccagaaaactagatggatatagattagacaga
tgctttttatacaatgacaaacactagtaagtctaaacatagaagacagt
caaagaaaattaaaagtcttgagctgtgatcaggttaataataatcagta
tttactagtgctagattaatggattatcagaactcgattagttattatta
aaactctgatcagttgggcagtggtggcacacgcctttaatcccagcact
ttagaggcagaggcaggcagatttctgagttcgaggccagcctggtctac
agagtgagctccaggacagccagggcaacacagagaaaccctatctcgaa
aaaccacagatagataaataaataaataaataaataaataaataaataaa
taaataaataaaatcatgttttcctagtagatttttttaaatgagagtga
aagttgaatccaagttacataaatacatacacagagacacagagagttga
ttataagtctctctctctctctactctctctctctccccccccctctctc
tctctctctcacacacacacacacacacacacacacacacacacacacac
acacacattaaaatcaaaccaaccaaccaaccaaggaaaaacaaaaacca
aaaataacttcctgggcatctagttaccactggaaatttcatggagtggg
aaacaaatggttcagggtctacaggcctgtgatgaggaacctggaactga
gggctctcaaactcctggaaatccagacactgagtcttggagattgggaa
tggggtgccctgtgagctaacaatgaacctggggccagaagctgaaagtc
tttaccttagcttagtgattgtctgggagagcagaggggccttctatggg
aacgttaggcagcacaacacacaagaaaatgccttctcatgttcctctat
gtttgatctttgaaaaaagagac
gaattcagtaagaatgttgcctattcagtgacattcagaattgcctctgg
tattacactatcactttgaataaaagctaagtcactgccctatacaggaa
tttactatcatctaggaagaaggaagtttgagacctaaggagaaaccaga
gtagatacttagaactatagatagctgagctatacccatacacacatatt
tacaatggcctagggggaaggtggactatacaatagactaaaataggaac
tatggcaaaggcacaaaacccttgaccctggcttctaagattaagtggac
cttaggtggagctctttttgatccccgttgtcaacaatgaattctattcc
aggtggttcctgttagaccttctgtgtttgtattcctctgttttgtgtaa
gaatccagtaacctctttgtaccttgctggtgtgtcacccaacttcccta
ttttcttctgtataaaaagtttgatgctcaatttgacaaattacatgcag
attctacacaacctctcctgtgtgcatctgtctgtcatttcacctgtcac
tttgcccacctgccccagagacccactccacgcagacaaagagatccaga
gggtctgaggcaatccacattttggttttctgtcttcttaggtattatat
ggtctgggaattgaatcttgggtattctggacttttgggctaacattcac
ttctcagtgagtaatacagtgtttgtttctttgtgacttagtcacctcac
tcacgatgatattctcaagttccattcatttgcccgtgaatttcatgaag
tttttctttttaatggctgagtagtatattgttgtgtaaatttactacat
tttctgtatccattcctttgttgagggacagttgggttctttccagcttc
tggctttcataaatatggctgctatgaacatagtggggcatgtgtcctta
ttacatgttggagcatcttctgcatatatgcccaggagtagtatagctgg
gttctcaggtagtatgatgtccaattttctgagaacagccagactgaatt
ctaggggggttgtagtatcttgcatacacctgcatgagggggtccctctt
cttcatcctcacagcatctgtgtcacctgaattagatttagcaatcggac
tggggaaactcagtgttgaattcttccttgagacaatgagtgtgtacctc
ttatggtgcttctgctccttgggatgctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19261176_19262302
seq2: B6Ng01-096C12.b_48_1170

seq1  GAATTCCCCTAATACGCTTTAAATTGGGACTTCAAGCTCACCTGTAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTAATACGCTTTAAATTGGGACTTCAAGCTCACCTGTAGAAT  50

seq1  CCTAGCAGGTTGGATTCTACTGAAATCTGCATTGTAGCAAAGGCAGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAGGTTGGATTCTACTGAAATCTGCATTGTAGCAAAGGCAGTAAA  100

seq1  CTCAGTCCTTTGACTCATCAAAGCTGGAGGACCCAATATGATTTTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCCTTTGACTCATCAAAGCTGGAGGACCCAATATGATTTTGGGTT  150

seq1  AAAAGCTCTTTCCTCTTTCCAGAAAACTAGATGGATATAGATTAGACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTCTTTCCTCTTTCCAGAAAACTAGATGGATATAGATTAGACAGA  200

seq1  TGCTTTTTATACAATGACAAACACTAGTAAGTCTAAACATAGAAGACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTATACAATGACAAACACTAGTAAGTCTAAACATAGAAGACAGT  250

seq1  CAAAGAAAATTAAAAGTCTTGAGCTGTGATCAGGTTAATAATAATCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAATTAAAAGTCTTGAGCTGTGATCAGGTTAATAATAATCAGTA  300

seq1  TTTACTAGTGCTAGATTAATGGATTATCAGAACTCGATTAGTTATTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGTGCTAGATTAATGGATTATCAGAACTCGATTAGTTATTATTA  350

seq1  AAACTCTGATCAGTTGGGCAGTGGTGGCACACGCCTTTAATCCCAGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGATCAGTTGGGCAGTGGTGGCACACGCCTTTAATCCCAGCACT  400

seq1  TTAGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTAC  450

seq1  AGAGTGAGCTCCAGGACAGCCAGGGCAACACAGAGAAACCCTATCTCGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGCTCCAGGACAGCCAGGGCAACACAGAGAAACCCTATCTCGAA  500

seq1  AAACCACAGATAGATAAATAAATAAATAAATAAATAAATAAATAAATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAGATAGATAAATAAATAAATAAATAAATAAATAAATAAATAAA  550

seq1  TAAATAAATAAAATCATGTTTTCCTAGTAGATTTTTTTAAATGAGAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAAATCATGTTTTCCTAGTAGATTTTTTTAAATGAGAGTGA  600

seq1  AAGTTGAATCCAAGTTACATAAATACATACACAGAGACACAGAGAGTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAATCCAAGTTACATAAATACATACACAGAGACACAGAGAGTTGA  650

seq1  TTATAAGTCTCTCTCTCTCTCTCCTCTCTCTCTCTCCCCCCCCCTCTCTC  700
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTATAAGTCTCTCTCTCTCTCTACTCTCTCTCTCTCCCCCCCCCTCTCTC  700

seq1  TCTCTCTCTCACACACACACACACACACACACACACACACACACACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCACACACACACACACACACACACACACACACACACACACAC  750

seq1  ACACACATTAAAATCAAACCAACCAACCAACCAAGGAAAAACAAAAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATTAAAATCAAACCAACCAACCAACCAAGGAAAAACAAAAACCA  800

seq1  AAAATAACTTCCTGGGCATCTAGTTACCACTGGAAATTTCATGGAGTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTTCCTGGGCATCTAGTTACCACTGGAAATTTCATGGAGTGGG  850

seq1  AAACAAATGGTTCAGGGTCTACAGGCCTGTGATGAGGAACCTGGAACTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGGTTCAGGGTCTACAGGCCTGTGATGAGGAACCTGGAACTGA  900

seq1  GGGCTCTCAAACTCCTGGAAATCCAGACACTGAGTCTTGGAGATTTGGGA  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGCTCTCAAACTCCTGGAAATCCAGACACTGAGTCTTGGAGA-TTGGGA  949

seq1  ATGGGGTGGCCCTGTGAGCTAACAATGAACCTGGGGCCAGAAGCTGAAAG  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGT-GCCCTGTGAGCTAACAATGAACCTGGGGCCAGAAGCTGAAAG  998

seq1  TCTTTACCTTAGCTTAGGTGATTGTCTGGGAGAGCAGAGGGGCCTTCTAT  1050
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTTTACCTTAGCTTA-GTGATTGTCTGGGAGAGCAGAGGGGCCTTCTAT  1047

seq1  GGGACGTTTAGGCAGCACAACACCACAGGAAAATGCCTTCTCCATGTTCC  1100
      ||||   ||||||||||||||| |||| ||||||||||||| ||||||||
seq2  GGGAACGTTAGGCAGCACAACA-CACAAGAAAATGCCTTCT-CATGTTCC  1095

seq1  TC-ATGTTGATTCTTGAAAAAAAGAGAC  1127
      || |||||   ||||  |||||||||||
seq2  TCTATGTTTGATCTTTGAAAAAAGAGAC  1123