BAC Information

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BAC

Clone NameB6Ng01-105D01
Chromosome9 (Build37)
Map Location 22,595,170 - 22,734,115
singlet/doubletdoublet
Overlap geneBbs9
Upstream geneAnkrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, LOC100040805
Downstream geneBmper, LOC100040866, LOC100040878, LOC100040893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105D01.bB6Ng01-105D01.g
ACCDH913278DH913279
length1,172899
definitionDH913278|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D01, 5' end.DH913279|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,595,170 - 22,596,342)(22,733,223 - 22,734,115)
sequence
gaattcccatgaccaacctcttgattaccgcacctcctcaagcagtctct
tctttgtaatccgatttcaaaggccccttcctcactaccaatgtgttggg
aggcctcccttctcgatggtgtgcagataaatcattaacatgcctcttaa
tactcattgagttttctgttgtagataatcccagtagcagatttcaagct
gtcgatataaggtccccgagtatagagttggaagaaatgggcagtagcct
actacttactgtgaactgttaaccaaagacagataaactaagtaaagatt
accatgaggcctatgtaacagcagcaaataatgagtttttaatatttata
aatccttttcttttttggtaatttaagtctaagtcctgtaattcttagta
atggccatatgaaatgactggcttgcaaaattcctgaaaattgaacaatt
agatccttctctagatcatctgggaggggctcactaagtgagctgcggtg
tgcttccccctccacatgctcctcctccctgaagccttccaagctcagct
ggagttaggatgctcatctctgaacctacagcatgactacagtctcaagc
aggttgggcaagatggacgccagtgctcagttctgttcttttacttacta
gatagggctgtggccaccccaccggaagttcccagtgcagtgaaagtgac
aggactttctcccacaggccggaagaaaggggtgcaagaacagcttgtaa
actcggaaagcttttctggtcatcagtggcctgccttttcacaatttctg
atgatgctgtatatcctttaagtaggaaaaaaaattaagactttagatta
atgccagtttttactagcaatttttatattgtcaaggtcaattttaaatg
caagtctaaacacatttcgtgcacttggatgtcccccaccctccttctgc
ccatgtatatgctccatgcccggacgacttcaggtctttctgagaatggt
ctcagtcttcttctctgaatggaagaaatgatgtcaagtagtacagtgat
ctaacgcgcctgatcaccattgcacagcaaagaagcacagcatgtcatct
tgcttaagtaatcggggaacatttttaacagtcaatgccacaaaagacag
ttttcttggctatagggcctcc
gaattctttcaatggatgtgactttgtggctgacaaacatagactcccat
tacattaagtgtgtatattttcttctgtttcatattgcttcagtgggaag
ttgtcaattctcttgacatttgtgtgtgtgtgtattttctagtttaaaaa
aatgttttcctctatatcaatgatttcccaccaattgattctgacaaaca
ctgacacaatcttctctgcttctcttggcatttgctgaccatattggctt
tgcagaatttacagttttcataatccactattcttgtactatttttctat
ggcatctcccttttcttgccacttcctcagctcacatcactgactttaga
atccttgatattttcagatgggacaccaaaaacttactttcatacttctt
ccttttttcactttagcctggatagtattaaataacatgtcttaaatttt
gttaatgttatcttctgaagtatctaatttgtattttattttatatattg
tatttatttctggaaattgtaattgatttttaaaacactattgtttcctt
tgcttcctgttttgtttgtgtttttattttagatagttggattcatttat
aatttttatttaaaaaacccttgcttgataactccagtctctcttatttt
tggggtctacttctactgattttctcctagctctagaatacacctttttt
cactatttgactttttttacattcctagttttaaaaacattgattgcttt
tttttacttgaatgatttttaagcagcgcattgtgttgttcacttgttga
agcatgctgaggtttggacagttaattactacagatgactcatctatatg
aatttgaggcttattatatgcttcttatgacttgaaacagcatagtcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22595170_22596342
seq2: B6Ng01-105D01.b_43_1214

seq1  GAATTCCCATGACCAACCTCTTGATTACCGCACCTCCTCAAGCAGTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGACCAACCTCTTGATTACCGCACCTCCTCAAGCAGTCTCT  50

seq1  TCTTTGTAATCCGATTTCAAAGGCCCCTTCCTCACTACCAATGTGTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTAATCCGATTTCAAAGGCCCCTTCCTCACTACCAATGTGTTGGG  100

seq1  AGGCCTCCCTTCTCGATGGTGTGCAGATAAATCATTAACATGCCTCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCCCTTCTCGATGGTGTGCAGATAAATCATTAACATGCCTCTTAA  150

seq1  TACTCATTGAGTTTTCTGTTGTAGATAATCCCAGTAGCAGATTTCAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATTGAGTTTTCTGTTGTAGATAATCCCAGTAGCAGATTTCAAGCT  200

seq1  GTCGATATAAGGTCCCCGAGTATAGAGTTGGAAGAAATGGGCAGTAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATATAAGGTCCCCGAGTATAGAGTTGGAAGAAATGGGCAGTAGCCT  250

seq1  ACTACTTACTGTGAACTGTTAACCAAAGACAGATAAACTAAGTAAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTACTGTGAACTGTTAACCAAAGACAGATAAACTAAGTAAAGATT  300

seq1  ACCATGAGGCCTATGTAACAGCAGCAAATAATGAGTTTTTAATATTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGGCCTATGTAACAGCAGCAAATAATGAGTTTTTAATATTTATA  350

seq1  AATCCTTTTCTTTTTTGGTAATTTAAGTCTAAGTCCTGTAATTCTTAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTTCTTTTTTGGTAATTTAAGTCTAAGTCCTGTAATTCTTAGTA  400

seq1  ATGGCCATATGAAATGACTGGCTTGCAAAATTCCTGAAAATTGAACAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCATATGAAATGACTGGCTTGCAAAATTCCTGAAAATTGAACAATT  450

seq1  AGATCCTTCTCTAGATCATCTGGGAGGGGCTCACTAAGTGAGCTGCGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTTCTCTAGATCATCTGGGAGGGGCTCACTAAGTGAGCTGCGGTG  500

seq1  TGCTTCCCCCTCCACATGCTCCTCCTCCCTGAAGCCTTCCAAGCTCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCCCTCCACATGCTCCTCCTCCCTGAAGCCTTCCAAGCTCAGCT  550

seq1  GGAGTTAGGATGCTCATCTCTGAACCTACAGCATGACTACAGTCTCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTAGGATGCTCATCTCTGAACCTACAGCATGACTACAGTCTCAAGC  600

seq1  AGGTTGGGCAAGATGGACGCCAGTGCTCAGTTCTGTTCTTTTACTTACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGGCAAGATGGACGCCAGTGCTCAGTTCTGTTCTTTTACTTACTA  650

seq1  GATAGGGCTGTGGCCACCCCACCGGAAGTTCCCAGTGCAGTGAAAGTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGCTGTGGCCACCCCACCGGAAGTTCCCAGTGCAGTGAAAGTGAC  700

seq1  AGGACTTTCTCCCACAGGCCGGAAGAAAGGGGTGCAAGAACAGCTTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTCTCCCACAGGCCGGAAGAAAGGGGTGCAAGAACAGCTTGTAA  750

seq1  ACTCGGAAAGCTTTTCTGGTCATCAGTGGCCTGCC-TTTCACAATTTCTG  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTCGGAAAGCTTTTCTGGTCATCAGTGGCCTGCCTTTTCACAATTTCTG  800

seq1  ATGATGCTGTATATCCTTTAAGTAGGAAAAAAAATTAAGACTTTAGATTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCTGTATATCCTTTAAGTAGGAAAAAAAATTAAGACTTTAGATTA  850

seq1  ATGCCAG-TTTTACTAGCAATTTTTATATTGTCAAGGTCAATTTTAAATG  898
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGTTTTTACTAGCAATTTTTATATTGTCAAGGTCAATTTTAAATG  900

seq1  CAAGTCTAAACACATTTCGTGCACTTGGATGTCCCC--ACCTCC-TCTGC  945
      ||||||||||||||||||||||||||||||||||||   ||||| |||||
seq2  CAAGTCTAAACACATTTCGTGCACTTGGATGTCCCCCACCCTCCTTCTGC  950

seq1  CCATGTATATGCTCCATGCCCGGACGACTTCAGGGCCTTTCTGAGAATGG  995
      |||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  CCATGTATATGCTCCATGCCCGGACGACTTCA-GGTCTTTCTGAGAATGG  999

seq1  CCTCAGTCTTCTCCTCTGAATGAGAGAAATGATGTCAAGTAGGTACAAGT  1045
       ||||||||||| |||||||||  ||||||||||||||||| |||| |||
seq2  TCTCAGTCTTCTTCTCTGAATGGAAGAAATGATGTCAAGTA-GTAC-AGT  1047

seq1  GA-CCAACGGCGCTGATCA-CATGGCACAGCACAGAAGCCACAGCATGCC  1093
      || | ||||   ||||||| ||| |||||||| ||||| ||||||||| |
seq2  GATCTAACGCGCCTGATCACCATTGCACAGCAAAGAAG-CACAGCATGTC  1096

seq1  ATCTCTGCTTAGGTAATCGGGGGACCATTTTTAACAGTC-ATGCCAC-CA  1141
      |||| |||||| |||||| ||||| |||||||||||||| |||||||  |
seq2  ATCT-TGCTTAAGTAATC-GGGGAACATTTTTAACAGTCAATGCCACAAA  1144

seq1  AGACAGTTTTCTTTGTGGTCTATAGGGCCTCC  1173
      |||||||||||||    | |||||||||||||
seq2  AGACAGTTTTCTT----GGCTATAGGGCCTCC  1172

seq1: chr9_22733223_22734115
seq2: B6Ng01-105D01.g_69_967 (reverse)

seq1  AGGACTATGCTGTTTC-AGTCATAAGAAGCATATAATAAGCCTCAAAATC  49
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  AGGACTATGCTGTTTCAAGTCATAAGAAGCATATAATAAGCCTCAAATTC  50

seq1  ATATAGATGAGTTCATCTGTAGTAATTTAGCTGTCCAAACCTCAGCATGC  99
      ||||||||||| ||||||||||||| ||| ||||||||||||||||||||
seq2  ATATAGATGAG-TCATCTGTAGTAA-TTAACTGTCCAAACCTCAGCATGC  98

seq1  TTCAAC-AGTGAACAACACAATGCGCTGCTAAAATATCATTCAAGT-AAA  147
      |||||| ||||||||||||||||||||||| ||| ||||||||||| |||
seq2  TTCAACAAGTGAACAACACAATGCGCTGCTTAAAAATCATTCAAGTAAAA  148

seq1  AAAAGCAGTCAATG-TTTTAAAACTAGGAATGT-AAAAAAGTCAAATAGT  195
      ||||||| |||||| |||||||||||||||||| ||||||||||||||||
seq2  AAAAGCAATCAATGTTTTTAAAACTAGGAATGTAAAAAAAGTCAAATAGT  198

seq1  G-AAAAAGGTGTATTCTAGAGCTAGGAGAAAATCAGTAGAAGTAGACCCC  244
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGGTGTATTCTAGAGCTAGGAGAAAATCAGTAGAAGTAGACCCC  248

seq1  -AAAATAAGAGAGACTGGAGTTATCAAGCAAGGG-TTTTTAAATAAAAAT  292
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAAATAAGAGAGACTGGAGTTATCAAGCAAGGGTTTTTTAAATAAAAAT  298

seq1  TATAAATGAATCCAACTATCTAAAATAAAAACACAAACAAAACAGGAAGC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGAATCCAACTATCTAAAATAAAAACACAAACAAAACAGGAAGC  348

seq1  AAAGGAAACAATAGTGTTTTAAAAATCAATTACAATTTCCAGAAATAAAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACAATAGTGTTTTAAAAATCAATTACAATTTCCAGAAATAAAT  398

seq1  ACAATATATAAAATAAAATACAAATTAGATACTTCAGAAGATAACATTAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATATAAAATAAAATACAAATTAGATACTTCAGAAGATAACATTAA  448

seq1  CAAAATTTAAGACATGTTATTTAATACTATCCAGGCTAAAGTGAAAAAAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTAAGACATGTTATTTAATACTATCCAGGCTAAAGTGAAAAAAG  498

seq1  GAAGAAGTATGAAAGTAAGTTTTTGGTGTCCCATCTGAAAATATCAAGGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGTATGAAAGTAAGTTTTTGGTGTCCCATCTGAAAATATCAAGGA  548

seq1  TTCTAAAGTCAGTGATGTGAGCTGAGGAAGTGGCAAGAAAAGGGAGATGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGTCAGTGATGTGAGCTGAGGAAGTGGCAAGAAAAGGGAGATGC  598

seq1  CATAGAAAAATAGTACAAGAATAGTGGATTATGAAAACTGTAAATTCTGC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAAAATAGTACAAGAATAGTGGATTATGAAAACTGTAAATTCTGC  648

seq1  AAAGCCAATATGGTCAGCAAATGCCAAGAGAAGCAGAGAAGATTGTGTCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAATATGGTCAGCAAATGCCAAGAGAAGCAGAGAAGATTGTGTCA  698

seq1  GTGTTTGTCAGAATCAATTGGTGGGAAATCATTGATATAGAGGAAAACAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTCAGAATCAATTGGTGGGAAATCATTGATATAGAGGAAAACAT  748

seq1  TTTTTTAAACTAGAAAATACACACACACACAAATGTCAAGAGAATTGACA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAACTAGAAAATACACACACACACAAATGTCAAGAGAATTGACA  798

seq1  ACTTCCCACTGAAGCAATATGAAACAGAAGAAAATATACACACTTAATGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCACTGAAGCAATATGAAACAGAAGAAAATATACACACTTAATGT  848

seq1  AATGGGAGTCTATGTTTGTCAGCCACAAAGTCACATCCATTGAAAGAATT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGTCTATGTTTGTCAGCCACAAAGTCACATCCATTGAAAGAATT  898

seq1  C  893
      |
seq2  C  899