BAC Information

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BAC

Clone NameB6Ng01-130O16
Chromosome9 (Build37)
Map Location 91,278,995 - 91,279,766
singlet/doubletsinglet
Overlap geneZic4
Upstream geneLOC100039777, LOC100039925, EG434428, LOC621576, Zic1
Downstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130O16.bB6Ng01-130O16.g
ACCDH932108DH932109
length1,186773
definitionDH932108|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O16, 5' end.DH932109|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcaaggatgtggagaaaggggaacaatcctccattgttggtg
ggattgcaagcttgtacaaccagtctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctatttaaaaaaaatgaatttatgaaattcctaggca
aatggatggaccttgagggtatcatcctgagtgaagtaacccaatcacaa
gggaactcgcacaatatgtactcactgataagtcgatattagcccagaaa
cttaggatacccaagatataagatacaacttgccaaacacatgaaattca
agaagaacgaagaccaaagtgtggacactttaccctttcttagaaatggg
aacaaaacacccatagaaggagttacagagacaaaatttggagctgtgac
gaaaggatggaccatctagtgattgccatatgcagggatccatcccataa
tcagcttccaaatgctgacaccattgcatacactagcaagattttgctga
aaggacccagatatagctctctcttgtgagactatgccagggcctagcaa
acacagaagtggatgatcacagtcagctattggatgggtcacacggcccc
aatggaggagctagagaaattacccaaggagctaaagggaactgcaaccc
tataggtggaacaacaatatgactaaccagtactcgggagctcttgttct
tagctgcaatatgtatcaaaagatgggctagtcgtcatcacttgcaagga
gagggccattgaacttgcaacttttatatgtcagatcaggggaacgccag
gcaaaaaaggggagatggtgtgggtaggggttctgc
gaattctgtctgccacctcctgggctcggaactccttggtcaggattgat
gggcaagggggaggaaaggaaaaggatcctgtgatggggtctgagaaggc
tctggcccaggtctcaaggaaaatgttttccacccttccacacccactgg
ggaaatgtacagctttacttttgccaccttgcagttgccaaaattgtgaa
taaattttaataagttttgttgttattgttgttgttgtttttaatctatt
tatcttggacattggttccatgggcaaagtgcatacaggatatgactata
gaatgactgcatttatgttttcatatagtgatctagtatcagcatattca
ataacttttaatggtggtctatctgcttgtctgcccttctactctccctc
ccttcgttccttgtctacttcttgaagcctcagtggccgggcctagaccg
gcgtaaaccagagcagctcgctggaaagcagcagccctgatactggaggc
ggcggtggctgcagctgggcccagaggtggcgacgataggctggggtggg
ggcgctgcagagtcagccaccactggtccaggcgcccgaacacacgtacc
attcgctcacgtctgtgccacgcacaaccaccgccgcagagcaagccact
gagggctcacggccgctttctaacgagggcgacgcgagagcagacgttat
atccgagtcgtagtcagagctgggttgcggtgagcgaccatgaactttca
tgtgctttcgcagagagctgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_91278995_91279766
seq2: B6Ng01-130O16.g_69_840 (reverse)

seq1  CCCAGCTCTCTGCGAAAGCACATGAAAGTTCATGGTCGCTCACCGCCACC  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCCAGCTCTCTGCGAAAGCACATGAAAGTTCATGGTCGCTCACCGCAACC  50

seq1  CAGCTCTGGCTACGACTCGGCTATAACGTCTGCTCTCGCGTCGCCCTCGT  100
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  CAGCTCTGACTACGACTCGGATATAACGTCTGCTCTCGCGTCGCCCTCGT  100

seq1  TAGAAAGCGGCCGTGAGCCCTCAGTGGCTTGCTCTGCGGCGGTGGTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCGGCCGTGAGCCCTCAGTGGCTTGCTCTGCGGCGGTGGTTGTG  150

seq1  CGTGGCACAGACGTGAGCGAATGGTACGTGTGTTCGGGCGCCTGGACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCACAGACGTGAGCGAATGGTACGTGTGTTCGGGCGCCTGGACCAG  200

seq1  TGGTGGCTGACTCTGCAGCGCCCCCACCCCAGCCTATCGTCGCCACCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTGACTCTGCAGCGCCCCCACCCCAGCCTATCGTCGCCACCTCT  250

seq1  GGGCCCAGCTGCAGCCACCGCCGCCTCCAGTATCAGGGCTGCTGCTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCAGCTGCAGCCACCGCCGCCTCCAGTATCAGGGCTGCTGCTTTCC  300

seq1  AGCGAGCTGCTCTGGTTTACGCCGGTCTAGGCCCGGCCACTGAGGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGCTGCTCTGGTTTACGCCGGTCTAGGCCCGGCCACTGAGGCTTCA  350

seq1  AGAAGTAGACAAGGAACGAAGGGAGGGAGAGTAGAAGGGCAGACAAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGACAAGGAACGAAGGGAGGGAGAGTAGAAGGGCAGACAAGCAG  400

seq1  ATAGACCACCATTAAAAGTTATTGAATATGCTGATACTAGATCACTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCACCATTAAAAGTTATTGAATATGCTGATACTAGATCACTATAT  450

seq1  GAAAACATAAATGCAGTCATTCTATAGTCATATCCTGTATGCACTTTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACATAAATGCAGTCATTCTATAGTCATATCCTGTATGCACTTTGCC  500

seq1  CATGGAACCAATGTCCAAGATAAATAGATTAAAAACAACAACAACAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACCAATGTCCAAGATAAATAGATTAAAAACAACAACAACAATAA  550

seq1  CAACAAAACTTATTAAAATTTATTCACAATTTTGGCAACTGCAAGGTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAACTTATTAAAATTTATTCACAATTTTGGCAACTGCAAGGTGGC  600

seq1  AAAAGTAAAGCTGTACATTTCCCCAGTGGGTGTGGAAGGGTGGAAAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAAGCTGTACATTTCCCCAGTGGGTGTGGAAGGGTGGAAAACAT  650

seq1  TTTCCTTGAGACCTGGGCCAGAGCCTTCTCAGACCCCATCACAGGATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGAGACCTGGGCCAGAGCCTTCTCAGACCCCATCACAGGATCCT  700

seq1  TTTCCTTTCCTCCCCCTTGCCCATCAATCCTGACCAAGGAGTTCCGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTCCTCCCCCTTGCCCATCAATCCTGACCAAGGAGTTCCGAGCC  750

seq1  CAGGAGGTGGCAGACAGAATTC  772
      ||||||||||||||||||||||
seq2  CAGGAGGTGGCAGACAGAATTC  772