BAC Information

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BAC

Clone NameB6Ng01-132B09
Chromosome9 (Build37)
Map Location 32,358,476 - 32,481,130
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666576, Barx2, LOC100042266, Tpi-rs4, LOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1
Downstream geneLOC669759, LOC100041398, Ets1, LOC100041426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132B09.bB6Ng01-132B09.g
ACCDH932979DH932980
length1,032486
definitionDH932979|Mus musculus domesticus DNA, BAC clone: B6Ng01-132B09, 5' end.DH932980|Mus musculus domesticus DNA, BAC clone: B6Ng01-132B09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,358,476 - 32,359,516)(32,480,639 - 32,481,130)
sequence
gaattctgctcttaggattcttggggagaagacgtctttcccaaagggac
agcatactatttcaaacaatggtcaatagaaattactgtctacatgtaca
tcccgtgttcttaaagataagctttctttaggaaagtagagaggtctgaa
gggcttcaggtattctagaggaaatgagagccaaacaaattgtttagtgc
cttaccatccctggtcggtcccccccccccaaccccagccctccgtcttc
cgtcttcctatttatttatctatttctatatttttcaggattgatagtag
gggttggaccaatggctgggcaagtgctctatatcaaagccttcttttca
cttttaattttgagacaggttctcattaagttgtccaggccagtcttgaa
cttgagctcctccaatgcaagcctcccaagatcacaggtttgttaccagc
tcctgcctttttaaaagggagactagtaagaggccaccgacttactgttc
agcagtcctcaaccttcctcatgctgtgaccctttaatacagttccctat
gatgttctgactccaactgtaaaataatttcaatttactttatagctgca
attttgctacagttatgaattgtaatgtaaatatcttctatgtaggatat
ttgatatgcaacctctgtgaaagggttgtttacccccacccgagggatct
caactcacaggttgagaaccgcagctctaagctcttccttcttgtgtttt
tgtatagtcctgagactgtagtcatttgcagaaatatctcttggatgttt
ttttctccttattctcttatgtgcattctgaaggcagggcccagagctaa
ttttattcgaagatgagtagctagtagccacacaaatgccaacaggttat
agaaaaggcacaattacccttacctaattatctttctcttaccataacta
agagaagaatgggaaatgaccatatcttcactttgtccatcgcaaagctt
tatctgagtggtctgtttcatatctggtttgg
caacttgcaaagcagtttgcttgctttggaggctgaggtttaaatgccac
ctgaaagggtgaatagagtttgtggaaatctgttttattaagaagcaaga
gtcttcaaaggccataggtaaggcttaataggatgctcaggaataggaag
cccatccatattaaaaaacaaaaaacaaacaaacaaaaaaccacagtgat
gcagagaagagagagccagccctccagacagtgagatagggcagggtctg
aactgaaaggcagaggctatgcacaggggcgagttctgagggccaaaggc
tgcccagggagaggtgatctctcccatagtgcaattaggcctcctgtttg
acccctgacttttgccccacaggatatttatggtctctggacaggcagct
agggggcaaatgaagggatatagactctgaaggcccttagtagggaaaga
actagaaggagagaactgaggtggaggggggggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32358476_32359516
seq2: B6Ng01-132B09.b_49_1079

seq1  GAATTCTGCTCTTAGGATTCTTGGGGAGATGTCGTCTTTCCCAAAGGGAC  50
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  GAATTCTGCTCTTAGGATTCTTGGGGAGAAGACGTCTTTCCCAAAGGGAC  50

seq1  AGCATACTATTTCAAACAATGGTCAATAGAAATTACTGTCTACATGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACTATTTCAAACAATGGTCAATAGAAATTACTGTCTACATGTACA  100

seq1  TCCCGTGTTCTTAAAGATAAGCTTTCTTTAGGAAAGTAGAGAGGTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTGTTCTTAAAGATAAGCTTTCTTTAGGAAAGTAGAGAGGTCTGAA  150

seq1  GGGCTTCAGGTATTCTAGAGGAAATGAGAGCCAAACAAATTGTTTAGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAGGTATTCTAGAGGAAATGAGAGCCAAACAAATTGTTTAGTGC  200

seq1  CTTACCATCCCTGGTCGGTCCCCCCCCCCCAACCCCAGCCCTCCGTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCATCCCTGGTCGGTCCCCCCCCCCCAACCCCAGCCCTCCGTCTTC  250

seq1  CGTCTTCCTATTTATTTATCTATTTCTATATTTTTCAGGATTGATAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCCTATTTATTTATCTATTTCTATATTTTTCAGGATTGATAGTAG  300

seq1  GGGTTGGACCAATGGCTGGGCAAGTGCTCTATATCAAAGCCTTCTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGACCAATGGCTGGGCAAGTGCTCTATATCAAAGCCTTCTTTTCA  350

seq1  CTTTTAATTTTGAGACAGGTTCTCATTAAGTTGTCCAGGCCAGTCTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTTTGAGACAGGTTCTCATTAAGTTGTCCAGGCCAGTCTTGAA  400

seq1  CTTGAGCTCCTCCAATGCAAGCCTCCCAAGATCACAGGTTTGTTACCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCTCCTCCAATGCAAGCCTCCCAAGATCACAGGTTTGTTACCAGC  450

seq1  TCCTGCCTTTTTAAAAGGGAGACTAGTAAGAGGCCACCGACTTACTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCTTTTTAAAAGGGAGACTAGTAAGAGGCCACCGACTTACTGTTC  500

seq1  AGCAGTCCTCAACCTTCCTCATGCTGTGACCCTTTAATACAGTTCCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCCTCAACCTTCCTCATGCTGTGACCCTTTAATACAGTTCCCTAT  550

seq1  GATGTTCTGACTCCAACTGTAAAATAATTTCAATTTACTTTATAGCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCTGACTCCAACTGTAAAATAATTTCAATTTACTTTATAGCTGCA  600

seq1  ATTTTGCTACAGTTATGAATTGTAATGTAAATATCTTCTATGTAGGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTACAGTTATGAATTGTAATGTAAATATCTTCTATGTAGGATAT  650

seq1  TTGATATGCAACCTCTGTGAAAGGGTTGTTTACCCCCACCCGAGGGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATGCAACCTCTGTGAAAGGGTTGTTTACCCCCACCCGAGGGATCT  700

seq1  CAACTCACAGGTTGAGAACCGCAGCTCTAAGCTCTTCCTTCTTTGTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  CAACTCACAGGTTGAGAACCGCAGCTCTAAGCTCTTCCTTC-TTGTG-TT  748

seq1  TTTGTATAGTCCTGAGACTGTAGTCATTTGCAGAAATATCTCTTGGATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAGTCCTGAGACTGTAGTCATTTGCAGAAATATCTCTTGGATGT  798

seq1  TTTTTTCTCCTTATTCTCTTATGTGCATCCTGAAGGCA-GGCCCAGAGCT  849
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  TTTTTTCTCCTTATTCTCTTATGTGCATTCTGAAGGCAGGGCCCAGAGCT  848

seq1  AATTTTATTCGAAGATGAGTAGCTAGTAGCCACACAAATGCAAACAGG-T  898
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  AATTTTATTCGAAGATGAGTAGCTAGTAGCCACACAAATGCCAACAGGTT  898

seq1  ATAGAAAAGGCAACAATTACCCTTAACTAATTATCTTTCTCTTAACCAAT  948
      ||||||||||| ||||||||||||| ||||||||||||||||||  | ||
seq2  ATAGAAAAGGC-ACAATTACCCTTACCTAATTATCTTTCTCTTA--CCAT  945

seq1  AACTAAAGAGAAGAATGGGAAATGACCCAGATCATCACATTTGTCCCAAC  998
      |||| |||||||||||||||||||| ||| ||| |||| |||||||  | 
seq2  AACT-AAGAGAAGAATGGGAAATGA-CCATATCTTCAC-TTTGTCC--AT  990

seq1  AGCAAAGCTTTACCTGAGTGGTTCTGTTTCATAGTCTGCTTTG  1041
       ||||||||||| |||||||| ||||||||||| |||| ||||
seq2  CGCAAAGCTTTATCTGAGTGG-TCTGTTTCATA-TCTGGTTTG  1031

seq1: chr9_32480639_32481130
seq2: B6Ng01-132B09.g_67_558 (reverse)

seq1  CTGCCCCCCCCTCCACCTCAGTTCTCTCCTTCTAGTTCTTTCCCTACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCCCCTCCACCTCAGTTCTCTCCTTCTAGTTCTTTCCCTACTAA  50

seq1  GGGCCTTCAGAGTCTATATCCCTTCATTTGCCCCCTAGCTGCCTGTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTCAGAGTCTATATCCCTTCATTTGCCCCCTAGCTGCCTGTCCAG  100

seq1  AGACCATAAATATCCTGTGGGGCAAAAGTCAGGGGTCAAACAGGAGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATAAATATCCTGTGGGGCAAAAGTCAGGGGTCAAACAGGAGGCCT  150

seq1  AATTGCACTATGGGAGAGATCACCTCTCCCTGGGCAGCCTTTGGCCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCACTATGGGAGAGATCACCTCTCCCTGGGCAGCCTTTGGCCCTCA  200

seq1  GAACTCGCCCCTGTGCATAGCCTCTGCCTTTCAGTTCAGACCCTGCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCGCCCCTGTGCATAGCCTCTGCCTTTCAGTTCAGACCCTGCCCTA  250

seq1  TCTCACTGTCTGGAGGGCTGGCTCTCTCTTCTCTGCATCACTGTGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTGTCTGGAGGGCTGGCTCTCTCTTCTCTGCATCACTGTGGTTTT  300

seq1  TTGTTTGTTTGTTTTTTGTTTTTTAATATGGATGGGCTTCCTATTCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTTTTGTTTTTTAATATGGATGGGCTTCCTATTCCTGA  350

seq1  GCATCCTATTAAGCCTTACCTATGGCCTTTGAAGACTCTTGCTTCTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTATTAAGCCTTACCTATGGCCTTTGAAGACTCTTGCTTCTTAAT  400

seq1  AAAACAGATTTCCACAAACTCTATTCACCCTTTCAGGTGGCATTTAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGATTTCCACAAACTCTATTCACCCTTTCAGGTGGCATTTAAACC  450

seq1  TCAGCCTCCAAAGCAAGCAAACTGCTTTGCAAGTTGGAATTC  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCCAAAGCAAGCAAACTGCTTTGCAAGTTGGAATTC  492