BAC Information

Click to search

BAC

Clone NameB6Ng01-133N08
Chromosome9 (Build37)
Map Location 32,464,469 - 32,577,871
singlet/doubletdoublet
Overlap geneLOC669759, LOC100041398, Ets1
Upstream geneEG666576, Barx2, LOC100042266, Tpi-rs4, LOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1
Downstream geneLOC100041426, LOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133N08.bB6Ng01-133N08.g
ACCDH934282DH934283
length1,0581,084
definitionDH934282|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N08, 5' end.DH934283|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,576,828 - 32,577,871)(32,464,469 - 32,465,568)
sequence
gaattccagattgaattcttttcattactactggtctacactctttcctt
gctgacttgtttctgctgagaaattagtcccctagcctctgtatgtgatg
cgtcttcttctgtggctatgtgcgtacttgtgaatgcgtgccacagtatc
cccccccacaagttcagagttctgctttgtggggttctcttcacttttat
gctagtcccgaggatcaaacttagactgttaggcttatacagcaagtgcc
ttcaccctctgagacatctcattggtccctatggatacttttttggtttt
ggttttacatttatttattctagagattgagggatagcatatgtgtgctt
gataacacatacagatatcagagaacaacttggaaatgcccgcccttcct
ttcttccttccttccttccttcctttccctctttcttccttcctttcttt
ctttctttctttctttctttctttctttctttctttctttctttctttct
ttctttctatgatgcaattctgggaaaacacacttgagagcaagcaccct
catccacttatccatcctcctggcctcatcccctcatccccctcttccac
ccccaccccagcctccttcccctgccacttgtaagagttacgtttaatct
ttagttttgagcaatttggcttaattatttcatacttccaatgcttgtga
tttcctagatctgtgggctgacaattttaaacaaatttagaaatattgta
gcagttagtagtacttccaatgttttgttttctttcagttatcctcccta
cgggttcacaactctaattctgtatctctaagcccttcaactcgctccac
agttcctagacactccacgcttctcggcttgcagcctctcttccttatgt
gcttgattcggggcatttttgttgctacatattcatagtcactaattttt
cccacagtgtagagtccaccatccatcccacctggcgagtttcatcttct
ttacgtagctcacccctctacaggtgactagatttctcatgcccctgctc
atcagctt
gaattctttcttagcactgcccaaagaattctatagacatgcttggcagt
ccgagaaaggaagaaggaagatgccttacacagcatcttgtaagacccag
agacttccggatctattagaagtctgtgggatgtcttatgcattgcagta
ttttataatcttcaccgcaggagaactcagtaattgctcaacctcaggaa
ctgcctaagccccactttttccttctgaatagtgggttatatgggaggaa
aacactgagtgtgcctttgggaagcataaggacacagtgtgaaggctcag
tacgtgacagggacactgccatgaacacacattctgactctgacaacttt
tggcccaatggacttgcttttctctcccaaggggcagttgatctgaagat
tgccagttacaaggtcaggagaaggaatgtgttcaggtcagcaaaatgga
gagtttgagttggcaaggaacttgcagatcatcaagctctcctcctccgg
aagcaaaagcttagggaggtcaagtgacaggccagaggttatacagctct
gtggtggtagaacagggctgacacacaagcatcctgctttataggcctct
gtgttcctggtagagtatgcaagtgtctgacattcccagaacataaccca
attatcctagatgacatatcacaatgtccatcctgctcactgctgactct
actgtaactctggattgaaaaacatcttgaagtgtttattgggccatcta
tgtttatggcttaaatctaaaccctggacttcagtagtcaaccaagggaa
aggcagtgtgtctatccagacgcaggaaaggagaggcaggggcagttact
gagcaaacacctgcaacctgtaaggctgtttggctaaagctggagaggca
ctggaagagctcccacacttacacagatacactgaggccactgtttctga
tttggtattataaaatatcctctttttctttctttcattctggggacttt
ggggactgtgacaacagaatgctttgggatgtgcagactaggagggaggg
aaatgttgctccgagactagctgcctgcaggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32576828_32577871
seq2: B6Ng01-133N08.b_57_1096 (reverse)

seq1  ATGAGCAAGGGGCATGAGAAATCTAAGTCACCTGTAGAGGGGTGAGCTAC  50
      |||||| ||||||||||||||||| |||||||||||||||||||||||| 
seq2  ATGAGC-AGGGGCATGAGAAATCT-AGTCACCTGTAGAGGGGTGAGCTA-  47

seq1  CGTAAAGAAGATGAAACTCGCCAGGTGGGATGGATGGTGGACTCTACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAAGAAGATGAAACTCGCCAGGTGGGATGGATGGTGGACTCTACACT  97

seq1  GTGGGAAAAATTAGTGACTATGAATATGTAGCAACAAAAAATGCCCCGAA  150
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTGGGAAAAATTAGTGACTATGAATATGTAGCAAC-AAAAATGCCCCGAA  146

seq1  TCAAGCACATAAGGAAGAGAGGCTGCAAGCCGAGAAGCGTGGAGTGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCACATAAGGAAGAGAGGCTGCAAGCCGAGAAGCGTGGAGTGTCTA  196

seq1  GGAACTGTGGAGCGAGTTGAAGGGCTTAGAGATACAGAATTAGAGTTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTGGAGCGAGTTGAAGGGCTTAGAGATACAGAATTAGAGTTGTG  246

seq1  AACCCGTAGGGAGGATAACTGAAAGAAAACAAAACATTGGAAGTACTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGTAGGGAGGATAACTGAAAGAAAACAAAACATTGGAAGTACTACT  296

seq1  AACTGCTACAATATTTCTAAATTTGTTTAAAATTGTCAGCCCACAGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTACAATATTTCTAAATTTGTTTAAAATTGTCAGCCCACAGATCT  346

seq1  AGGAAATCACAAGCATTGGAAGTATGAAATAATTAAGCCAAATTGCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATCACAAGCATTGGAAGTATGAAATAATTAAGCCAAATTGCTCAA  396

seq1  AACTAAAGATTAAACGTAACTCTTACAAGTGGCAGGGGAAGGAGGCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGATTAAACGTAACTCTTACAAGTGGCAGGGGAAGGAGGCTGGG  446

seq1  GTGGGGGTGGAAGAGGGGGATGAGGGGATGAGGCCAGGAGGATGGATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGTGGAAGAGGGGGATGAGGGGATGAGGCCAGGAGGATGGATAAG  496

seq1  TGGATGAGGGTGCTTGCTCTCAAGTGTGTTTTCCCAGAATTGCATCATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAGGGTGCTTGCTCTCAAGTGTGTTTTCCCAGAATTGCATCATAG  546

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  596

seq1  AGAAAGAAAGAAAGGAAGGAAGAAAGAGGGAAAGGAAGGAAGGAAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGGAAGGAAGAAAGAGGGAAAGGAAGGAAGGAAGGAAG  646

seq1  GAAGAAAGGAAGGGCGGGCATTTCCAAGTTGTTCTCTGATATCTGTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGAAGGGCGGGCATTTCCAAGTTGTTCTCTGATATCTGTATGT  696

seq1  GTTATCAAGCACACATATGCTATCCCTCAATCTCTAGAATAAATAAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAAGCACACATATGCTATCCCTCAATCTCTAGAATAAATAAATGT  746

seq1  AAAACCAAAACCAAAAAAGTATCCATAGGGACCAATGAGATGTCTCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAACCAAAAAAGTATCCATAGGGACCAATGAGATGTCTCAGAG  796

seq1  GGTGAAGGCACTTGCTGTATAAGCCTAACAGTCTAAGTTTGATCCTCGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGCACTTGCTGTATAAGCCTAACAGTCTAAGTTTGATCCTCGGG  846

seq1  ACTAGCATAAAAGTGAAGAGAACCCCACAAAGCAGAACTCTGAACTTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCATAAAAGTGAAGAGAACCCCACAAAGCAGAACTCTGAACTTGTG  896

seq1  GGGGGGGATACTGTGGCACGCATTCACAAGTACGCACATAGCCACAGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGATACTGTGGCACGCATTCACAAGTACGCACATAGCCACAGAAG  946

seq1  AAGACGCATCACATACAGAGGCTAGGGGACTAATTTCTCAGCAGAAACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGCATCACATACAGAGGCTAGGGGACTAATTTCTCAGCAGAAACAA  996

seq1  GTCAGCAAGGAAAGAGTGTAGACCAGTACTAATGAAAAGAATTC  1044
      |||||||||||||||||||||||||||| |||||||||||||||
seq2  GTCAGCAAGGAAAGAGTGTAGACCAGTAGTAATGAAAAGAATTC  1040

seq1: chr9_32464469_32465568
seq2: B6Ng01-133N08.g_69_1152

seq1  GAATTCTTTCTTAGCACTGCCCAAAGAATTCTATAGACATGCTTGGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTAGCACTGCCCAAAGAATTCTATAGACATGCTTGGCAGT  50

seq1  CCGAGAAAGGAAGAAGGAAGATGCCTTACACAGCATCTTGTAAGACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGAAAGGAAGAAGGAAGATGCCTTACACAGCATCTTGTAAGACCCAG  100

seq1  AGACTTCCGGATCTATTAGAAGTCTGTGGGATGTCTTATGCATTGCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCCGGATCTATTAGAAGTCTGTGGGATGTCTTATGCATTGCAGTA  150

seq1  TTTTATAATCTTCACCGCAGGAGAACTCAGTAATTGCTCAACCTCAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATCTTCACCGCAGGAGAACTCAGTAATTGCTCAACCTCAGGAA  200

seq1  CTGCCTAAGCCCCACTTTTTCCTTCTGAATAGTGGGTTATATGGGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTAAGCCCCACTTTTTCCTTCTGAATAGTGGGTTATATGGGAGGAA  250

seq1  AACACTGAGTGTGCCTTTGGGAAGCATAAGGACACAGTGTGAAGGCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGAGTGTGCCTTTGGGAAGCATAAGGACACAGTGTGAAGGCTCAG  300

seq1  TACGTGACAGGGACACTGCCATGAACACACATTCTGACTCTGACAACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGACAGGGACACTGCCATGAACACACATTCTGACTCTGACAACTTT  350

seq1  TGGCCCAATGGACTTGCTTTTCTCTCCCAAGGGGCAGTTGATCTGAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAATGGACTTGCTTTTCTCTCCCAAGGGGCAGTTGATCTGAAGAT  400

seq1  TGCCAGTTACAAGGTCAGGAGAAGGAATGTGTTCAGGTCAGCAAAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTTACAAGGTCAGGAGAAGGAATGTGTTCAGGTCAGCAAAATGGA  450

seq1  GAGTTTGAGTTGGCAAGGAACTTGCAGATCATCAAGCTCTCCTCCTCCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGAGTTGGCAAGGAACTTGCAGATCATCAAGCTCTCCTCCTCCGG  500

seq1  AAGCAAAAGCTTAGGGAGGTCAAGTGACAGGCCAGAGGTTATACAGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAGCTTAGGGAGGTCAAGTGACAGGCCAGAGGTTATACAGCTCT  550

seq1  GTGGTGGTAGAACAGGGCTGACACACAAGCATCCTGCTTTATAGGCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGTAGAACAGGGCTGACACACAAGCATCCTGCTTTATAGGCCTCT  600

seq1  GTGTTCCTGGTAGAGTATGCAAGTGTCTGACATTCCCAGAACATAACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTGGTAGAGTATGCAAGTGTCTGACATTCCCAGAACATAACCCA  650

seq1  ATTATCCTAGATGACATATCACAATGTCCATCCTGCTCACTGCTGACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCTAGATGACATATCACAATGTCCATCCTGCTCACTGCTGACTCT  700

seq1  ACTGTAACTCTGGATTGAAAAACATCTTGAAGTGTTTATTGGGCCATCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAACTCTGGATTGAAAAACATCTTGAAGTGTTTATTGGGCCATCTA  750

seq1  TGTTTATGGCTTAAATCTAAACCCTGGACTTCAGTAGTCAACCAAGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGGCTTAAATCTAAACCCTGGACTTCAGTAGTCAACCAAGGGAA  800

seq1  AGGCAGTGTGTCTATCCAGACGCAGGGAAAGGAGAGGCAGGGGGCAGTTA  850
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  AGGCAGTGTGTCTATCCAGACGCA-GGAAAGGAGAGGCA-GGGGCAGTTA  848

seq1  CTGAGCAAACACCTGCAACCTG-AAGGCTGTTTGGCTAAAGCTGGAGAGG  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGAGCAAACACCTGCAACCTGTAAGGCTGTTTGGCTAAAGCTGGAGAGG  898

seq1  CACTGGAAGAAGCTCCCACACTTACACAGATACACTGAGGCCACCTGTTT  949
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  CACTGGAAG-AGCTCCCACACTTACACAGATACACTGAGGCCA-CTGTTT  946

seq1  CTGATTTGGTATTATAAAATATCCTCTTATTCTTTCTTTTCAATTCTGGG  999
      |||||||||||||||||||||||||||| ||||||||||   ||||| ||
seq2  CTGATTTGGTATTATAAAATATCCTCTTTTTCTTTCTTT--CATTCT-GG  993

seq1  GGACTTTGGGGACTGTGAACAAACAGAATGGCTTTGGGATGTAGCAAGAC  1049
      ||||||||||||||||||   |||||||| |||||||||||| || ||||
seq2  GGACTTTGGGGACTGTGA--CAACAGAAT-GCTTTGGGATGT-GC-AGAC  1038

seq1  TAGTAGGGGAGGGGAAATGGTGGCTCTGGAGACATAGCTGCCTGCAGGCT  1099
      ||| ||||   ||||||| || ||||  ||||| ||||||||||||||||
seq2  TAGGAGGG--AGGGAAAT-GTTGCTC-CGAGAC-TAGCTGCCTGCAGGCT  1083

seq1  A  1100
      |
seq2  A  1084