MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-144F22
Chromosome	9 (Build37)
Map Location	6,346,079 - 6,510,431
singlet/doublet	doublet
Overlap gene	Pdgfd, EG664919
Upstream gene	Casp12, LOC547033, LOC100039361, LOC100039372, LOC664957, LOC676037, Ddi1
Downstream gene	LOC100039400, LOC100039418, EG547034, Dync2h1, LOC100039658, Dcun1d5, Mmp13, Mmp12, Mmp1b, Mmp3, Mmp1a, Mmp10
Link	Open Mouse BAC browser

Click to get alignment info.

name	Casp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12364 MGI:1312922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547033 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547033
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100039361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100039372 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC664957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC676037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Pdgfd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71829 MGI:1919079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 8 Proteins

name	EG664919 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039418 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	EG547034 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Dync2h1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039658 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Dcun1d5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76863 MGI:1924113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17386 MGI:1340026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17381 MGI:97005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83996 MGI:1933847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17392 MGI:97010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83995 MGI:1933846
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17384 MGI:97007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367382 GeneID:12364 MGI:1312922
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 12 transcript_id : NM_009808.3

name	LOC100039361 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259437 GeneID:100039361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Mnn4p transcript_id : XM_001472754.1

name	Pdgfd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802185 GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-derived growth factor, D polypeptide transcript_id : NM_027924.2

name	Ddi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385568 GeneID:71829 MGI:1919079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 8 Proteins product : DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae) transcript_id : XM_885770.2

name	EG664919 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385569 GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG664919 transcript_id : XM_973693.1

name	LOC100039418 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259439 GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001472846.1

name	EG547034 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259441 GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG547034 transcript_id : XM_886250.3

name	Dync2h1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:72534791 GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 2 heavy chain 1 transcript_id : NM_029851.2

name	LOC100039658 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259448 GeneID:100039658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039658 transcript_id : XM_001473007.1

name	Dcun1d5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130656 GeneID:76863 MGI:1924113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) transcript_id : NM_029775.2

name	Mmp13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678895 GeneID:17386 MGI:1340026
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 13 transcript_id : NM_008607.1

name	Mmp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115392137 GeneID:17381 MGI:97005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 12 transcript_id : NM_008605.3

name	Mmp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115385969 GeneID:83996 MGI:1933847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 1b (interstitial collagenase) transcript_id : NM_032007.3

name	Mmp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754713 GeneID:17392 MGI:97010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 3 transcript_id : NM_010809.1

name	Mmp1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778986 GeneID:83995 MGI:1933846
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 1a (interstitial collagenase) transcript_id : NM_032006.3

name	Mmp10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130723 GeneID:17384 MGI:97007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 10 transcript_id : NM_019471.2

name	Casp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981868 CCDS:CCDS22800.1 GeneID:12364 MGI:1312922
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006926 - virus-infected cell apoptosis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : caspase 12 protein_id : NP_033938.2

name	LOC100039361 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259438 GeneID:100039361
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472804.1

name	Pdgfd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229137 CCDS:CCDS22801.1 GeneID:71785 MGI:1919035
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005161 - platelet-derived growth factor receptor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence ISS]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : platelet-derived growth factor, D polypeptide protein_id : NP_082200.1

name	Ddi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82919834 GeneID:71829 MGI:1919079
definition	codon_start : 1 product : DDI1, DNA-damage inducible 1, homolog 1 protein_id : XP_890863.1

name	EG664919 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385570 GeneID:664919 MGI:3644302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978787.1

name	LOC100039418 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259440 GeneID:100039418
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472896.1

name	EG547034 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259442 GeneID:547034 MGI:3643789
definition	codon_start : 1 product : similar to 5-methyltetrahydrofolate-homocysteine methyltransferase protein_id : XP_891343.3

name	Dync2h1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:72534792 GeneID:110350 MGI:107736
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042624 - ATPase activity, uncoupled [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008105 - asymmetric protein localization [Evidence IMP]; GO:0042384 - cilium biogenesis [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0016485 - protein processing [Evidence IMP] codon_start : 1 note : dynein heavy chain 2; cytoplasmic dynein heavy chain 2 product : dynein, cytoplasmic, heavy chain 2 protein_id : NP_084127.2

name	LOC100039658 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259449 GeneID:100039658
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473057.1

name	Dcun1d5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956220 GeneID:76863 MGI:1924113
definition	codon_start : 1 product : DCN1, defective in cullin neddylation 1, domain containing 5 protein_id : NP_084051.1

name	Mmp13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678896 CCDS:CCDS22803.1 GeneID:17386 MGI:1340026
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008133 - collagenase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004232 - interstitial collagenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IDA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030282 - bone mineralization [Evidence IMP]; GO:0051216 - cartilage development [Evidence IMP]; GO:0030574 - collagen catabolism [Evidence IDA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : collagenase-1; interstitial collagenase; Collagenase-3 product : matrix metalloproteinase 13 protein_id : NP_032633.1

name	Mmp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115392138 CCDS:CCDS22804.1 GeneID:17381 MGI:97005
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004234 - macrophage elastase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : macrophage metalloelastase; macrophage elastase; macrophage-metalloelastase product : matrix metalloproteinase 12 protein_id : NP_032631.3

name	Mmp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115385970 CCDS:CCDS22805.1 GeneID:83996 MGI:1933847
definition	EC_number : 3.4.24.7 GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004232 - interstitial collagenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : collagenase-like B; matrix metalloproteinase 1b (interstitial collagenase) product : matrix metalloproteinase 1b precursor protein_id : NP_114396.3

name	Mmp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754714 CCDS:CCDS22806.1 GeneID:17392 MGI:97010
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004248 - stromelysin 1 activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : progelatinase; stromelysin 1; stromelysin-1 product : matrix metalloproteinase 3 protein_id : NP_034939.1

name	Mmp1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14030785 GeneID:83995 MGI:1933846
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008133 - collagenase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004232 - interstitial collagenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : collagenase-like A product : matrix metalloproteinase 1a (interstitial collagenase) protein_id : NP_114395.1

name	Mmp10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506899 CCDS:CCDS22807.1 GeneID:17384 MGI:97007
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0030303 - stromelysin 2 activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : stromelysin 2 product : matrix metalloproteinase 10 protein_id : NP_062344.1

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 1 pseudo : _no_value

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 2 pseudo : _no_value

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 3 pseudo : _no_value

name	LOC100039372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039372
definition	number : 2 pseudo : _no_value

name	LOC100039372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039372
definition	number : 1 pseudo : _no_value

name	LOC664957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664957
definition	number : 1 pseudo : _no_value

name	LOC664957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664957
definition	number : 2 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 1 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 2 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 3 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 4 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 5 pseudo : _no_value

name	LOC100039400 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039400
definition	number : 1 pseudo : _no_value

clone name	MSMg01-280D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373O17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-397C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-137K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152B18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-062N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-463I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-083I01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-087K16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-464C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-497E14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-184K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-144F22.b	B6Ng01-144F22.g
ACC	DH942065	DH942066
length	1,109	1,090
definition	DH942065\|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F22, 5' end.	DH942066\|Mus musculus domesticus DNA, BAC clone: B6Ng01-144F22, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(6,346,079 - 6,347,232)	(6,509,328 - 6,510,431)
sequence	gaattcaatgcctttcagatgttctgttacctacagttttttcctagaaa atcttggatgagcatttactagttttaagcaagtaactcaaccccttggt atctgaatcattccacaactaaaagatggagacagaaatatctaaagtaa agatttatcatgaaatcaattcaagtgtgtgcaagaacagatttcctacg tgttgtagggcttagtaaattcccaatcaccgtattacttcatgatgctt ttgaacctttgaaatcagcatttgactgataacattttattgtgatatag taggttaatttttatagataaaaatggtaaatgtttctacttttgagaga ttcggcctacaaaaggaattatggaatttaaagtaatccatggttttaag tttacaatatcctaatttcttataaaaattattaaataactgaaactttg ccccccaattttgattgatctataaaaatttccataattaggccatgact tatagaagagggggtctgaaaattcacagtgagattgtaaagtaaagtag atagactcctcctggggaatttacggaccctgaaaaaaggctaagagctc cttgttctttgttataaaaatacaattattcatttactcctctcaccttc catcattgccccagagctataaatctactcaacaccaatatcacctgctt agaccttttcctaacaggtttcctacagagtcccccttgcccacattggg tcagcatcttagaggcacccttctagaagccatcctctatgccatgagtc atgcacatgcagcgagcagctccacactacagtgctgatacctcaactct tccaaaacctttcctacaacattctaggtaggttagagagaagagcttcc cagataagagagaataataagatttgaatgtttccctctgaatgcttaga agatatgctaaaaagaatctgagcattcttggtcattcatggagctgtag tatgaataccaattctagccagtaaaaaaatctgccaagacgagattgtc ttcttagtctgctgcttctacttgcacatatgtcgttagagaattctaag agctgtatt	gaattccatgctcacagctctgctacagtttttggaaaactgtaaaatgt ttaagctgttgttgatcaatgtaaaaagactttgataagcaaatcttacc atcagttaaagcatgagttcatgaattctctgaggtatatacagatacac acacatatgcaaatatatgtgtgaacatagaagtatggctttgttgtgac tatttgcatgtatgtatgctcagtgtatattgtatcatatatcaataaag agataggactgtgtcttctgttgttttcttcaccatttcacatactgagg aaacactgggtgcattgctgcccatggccaactctaagtaataacaaaat ggtcttaagctgactgcacctttacctactacacctcacttctttaggat ttcaaacattagaactgtgaactgtatgtaaacagccaaaattcaagcaa cttttgttctgaaaaagaacacatcagaagtattaaagctcatctgagca ggatagaaaaacagggacatctccagtgcagtaaaggaagggtttgaaat ggatgagctagaattctggctagaggaggtgctgtaatgagtacaaagga tatggacctaagtggatgggtgagtggctcaccagactagacagcagtca tcaccaagcccatcccacatcattactgtcacacaatttaaatactattt acttttttaaaagccccagccagcaactataagcaaagactgtaaagtga agaaatgcaccttccttgttgggagcttgatgggagtgaccttgtttgaa cattaactgccttaaatgcttgctagcataaagtcttggactctgtgggg aaagtactagcccagctgagtacaatagacatagatcctgaagtcagtgg agacaaatatctataaatcttgtggataggtgtctaatacccattctgtc tatcttcctgctgaactgtttatccagtcagcatcctgtctgggaacagg cacattactcagagattaagtgatccccttgcacctcttcctgctcctat gagtaataccgggtgggaaataggacctgtcagcttgatc
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr9_6346079_6347232
seq2: B6Ng01-144F22.b_48_1156

seq1  GAATTCAATGCCTTTCAGATGTTCTGTTACCTACAGTTTTTTCCTAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCTTTCAGATGTTCTGTTACCTACAGTTTTTTCCTAGAAA  50

seq1  ATCTTGGATGAGCATTTACTAGTTTTAAGCAAGTAACTCAACCCCTTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGATGAGCATTTACTAGTTTTAAGCAAGTAACTCAACCCCTTGGT  100

seq1  ATCTGAATCATTCCACAACTAAAAGATGGAGACAGAAATATCTAAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAATCATTCCACAACTAAAAGATGGAGACAGAAATATCTAAAGTAA  150

seq1  AGATTTATCATGAAATCAATTCAAGTGTGTGCAAGAACAGATTTCCTACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATCATGAAATCAATTCAAGTGTGTGCAAGAACAGATTTCCTACG  200

seq1  TGTTGTAGGGCTTAGTAAATTCCCAATCACCGTATTACTTCATGATGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAGGGCTTAGTAAATTCCCAATCACCGTATTACTTCATGATGCTT  250

seq1  TTGAACCTTTGAAATCAGCATTTGACTGATAACATTTTATTGTGATATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCTTTGAAATCAGCATTTGACTGATAACATTTTATTGTGATATAG  300

seq1  TAGGTTAATTTTTATAGATAAAAATGGTAAATGTTTCTACTTTTGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTAATTTTTATAGATAAAAATGGTAAATGTTTCTACTTTTGAGAGA  350

seq1  TTCGGCCTACAAAAGGAATTATGGAATTTAAAGTAATCCATGGTTTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCCTACAAAAGGAATTATGGAATTTAAAGTAATCCATGGTTTTAAG  400

seq1  TTTACAATATCCTAATTTCTTATAAAAATTATTAAATAACTGAAACTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATATCCTAATTTCTTATAAAAATTATTAAATAACTGAAACTTTG  450

seq1  CCCCCCAATTTTGATTGATCTATAAAAATTTCCATAATTAGGCCATGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAATTTTGATTGATCTATAAAAATTTCCATAATTAGGCCATGACT  500

seq1  TATAGAAGAGGGGGTCTGAAAATTCACAGTGAGATTGTAAAGTAAAGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAGAGGGGGTCTGAAAATTCACAGTGAGATTGTAAAGTAAAGTAG  550

seq1  ATAGACTCCTCCTGGGGAATTTACGGACCCTGAAAAAAGGCTAAGAGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTCCTCCTGGGGAATTTACGGACCCTGAAAAAAGGCTAAGAGCTC  600

seq1  CTTGTTCTTTGTTATAAAAATACAATTATTCATTTACTCCTCTCACCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTTTGTTATAAAAATACAATTATTCATTTACTCCTCTCACCTTC  650

seq1  CATCATTGCCCCAGAGCTATAAATCTACTCAACACCAATATCACCTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGCCCCAGAGCTATAAATCTACTCAACACCAATATCACCTGCTT  700

seq1  AGACCTTTTCCTAACAGGTTTCCTACAGAGTCCCCCTTGCCCACATTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTTTCCTAACAGGTTTCCTACAGAGTCCCCCTTGCCCACATTGGG  750

seq1  TCAGCATCTTAGAGGCACCCTTCTAGAAGCCATCCTCTATGCCATGAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATCTTAGAGGCACCCTTCTAGAAGCCATCCTCTATGCCATGAGTC  800

seq1  ATGCACATGCAGCGAGCAGCTCCACACTACAGTGCTGATACCTCAACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGCAGCGAGCAGCTCCACACTACAGTGCTGATACCTCAACTCT  850

seq1  TCCAAAACCTTTCCTACAACATTCTAGGTTAGGTTAGAGAGAAGAGCTTC  900
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCCAAAACCTTTCCTACAACATTCTAGG-TAGGTTAGAGAGAAGAGCTTC  899

seq1  CCAGAATAAGAGAGAATAATAAGATTTGAATTGTTTCCCCTCTGAATGCT  950
      |||| ||||||||||||||||||||||||| ||||| |||||||||||||
seq2  CCAG-ATAAGAGAGAATAATAAGATTTGAA-TGTTT-CCCTCTGAATGCT  946

seq1  TAGAAAGATTATGCTAAAAAGAATCTGAGCAATTTCTTTGGTTCATTCAT  1000
      ||| |||| ||||||||||||||||||||||  |||||  | ||||||||
seq2  TAG-AAGA-TATGCTAAAAAGAATCTGAGCA--TTCTT--GGTCATTCAT  990

seq1  GGAGCTGTTAGTTATTGAATACCAATTCTTAGCAAAAAAAAAAAAAAAAA  1050
      ||||||| ||||   ||||||||||||| ||||             |  |
seq2  GGAGCTG-TAGT--ATGAATACCAATTC-TAGC------------CAGTA  1024

seq1  AAAAAATCTGGCACATAGACGAGATTGTCTTTCCTTTAGTTCTGCCTTGC  1100
      |||||||||| ||   |||||||||||||||    |||| |||||  |||
seq2  AAAAAATCTGCCA---AGACGAGATTGTCTT---CTTAG-TCTGC--TGC  1065

seq1  TTCTACTGGCAAACATAATGTCGTTTTAGAAGAATTTCTTAAAGGAGCTG  1150
      ||||||| ||  |||| ||||||||  ||||    ||||   | ||||||
seq2  TTCTACTTGC--ACAT-ATGTCGTTAGAGAA----TTCT---AAGAGCTG  1105

seq1  TATT  1154
      ||||
seq2  TATT  1109

seq1: chr9_6509328_6510431
seq2: B6Ng01-144F22.g_66_1155 (reverse)

seq1  GATCAAGCTGACAGGTTCTTATTTTTCCCACACGGGTTATATACTCATAG  50
      |||||||||||||||| |   | |||||||| |||  ||| |||||||||
seq2  GATCAAGCTGACAGGTCC---TATTTCCCACCCGG--TAT-TACTCATAG  44

seq1  GAGCAGGAAGGAGGGTGCAAGGGGATCACTTTATCTCTGGGTAATGTGCC  100
      ||||||||||   |||||||||||||||||| ||||||| ||||||||||
seq2  GAGCAGGAAG--AGGTGCAAGGGGATCACTTAATCTCTGAGTAATGTGCC  92

seq1  TGTTCCCAGGAACAGGATGCTGACTGGATAAACAGTTCAGCAGGAAGATT  150
      |||||||||  ||||||||||||||||||||||||||||||||||||| |
seq2  TGTTCCCAG--ACAGGATGCTGACTGGATAAACAGTTCAGCAGGAAGA-T  139

seq1  AGAACAGAATGGGTTATTAGACACCTATCCACAAGATTTATAGATATTTG  200
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AG-ACAGAATGGG-TATTAGACACCTATCCACAAGATTTATAGATATTTG  187

seq1  TTCTCCACTGACTTCAGGATCTATGTCTATTTGTACTCAGCTGGGCTAGT  250
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  -TCTCCACTGACTTCAGGATCTATGTCTA-TTGTACTCAGCTGGGCTAGT  235

seq1  ACTTT-CCCACAGAGTCCAAGACTTTATGCTAGCAAGCATTTAAGGCAGT  299
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCCACAGAGTCCAAGACTTTATGCTAGCAAGCATTTAAGGCAGT  285

seq1  TAATGTTCAAACAAGGTCACTCCCATCAAGCTCCCAACAAGGAAGGTGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCAAACAAGGTCACTCCCATCAAGCTCCCAACAAGGAAGGTGCA  335

seq1  TTTCTTCACTTTACAGTCTTTGCTTATAGTTGCTGGCTGGGGCTTTTAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCACTTTACAGTCTTTGCTTATAGTTGCTGGCTGGGGCTTTTAAA  385

seq1  AAAGTAAATAGTATTTAAATTGTGTGACAGTAATGATGTGGGATGGGCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAATAGTATTTAAATTGTGTGACAGTAATGATGTGGGATGGGCTT  435

seq1  GGTGATGACTGCTGTCTAGTCTGGTGAGCCACTCACCCATCCACTTAGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGACTGCTGTCTAGTCTGGTGAGCCACTCACCCATCCACTTAGGT  485

seq1  CCATATCCTTTGTACTCATTACAGCACCTCCTCTAGCCAGAATTCTAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCCTTTGTACTCATTACAGCACCTCCTCTAGCCAGAATTCTAGCT  535

seq1  CATCCATTTCAAACCCTTCCTTTACTGCACTGGAGATGTCCCTGTTTTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTCAAACCCTTCCTTTACTGCACTGGAGATGTCCCTGTTTTTC  585

seq1  TATCCTGCTCAGATGAGCTTTAATACTTCTGATGTGTTCTTTTTCAGAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGCTCAGATGAGCTTTAATACTTCTGATGTGTTCTTTTTCAGAAC  635

seq1  AAAAGTTGCTTGAATTTTGGCTGTTTACATACAGTTCACAGTTCTAATGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGCTTGAATTTTGGCTGTTTACATACAGTTCACAGTTCTAATGT  685

seq1  TTGAAATCCTAAAGAAGTGAGGTGTAGTAGGTAAAGGTGCAGTCAGCTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCCTAAAGAAGTGAGGTGTAGTAGGTAAAGGTGCAGTCAGCTTA  735

seq1  AGACCATTTTGTTATTACTTAGAGTTGGCCATGGGCAGCAATGCACCCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTTTGTTATTACTTAGAGTTGGCCATGGGCAGCAATGCACCCAG  785

seq1  TGTTTCCTCAGTATGTGAAATGGTGAAGAAAACAACAGAAGACACAGTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTCAGTATGTGAAATGGTGAAGAAAACAACAGAAGACACAGTCC  835

seq1  TATCTCTTTATTGATATATGATACAATATACACTGAGCATACATACATGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTTATTGATATATGATACAATATACACTGAGCATACATACATGC  885

seq1  AAATAGTCACAACAAAGCCATACTTCTATGTTCACACATATATTTGCATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTCACAACAAAGCCATACTTCTATGTTCACACATATATTTGCATA  935

seq1  TGTGTGTGTATCTGTATATACCTCAGAGAATTCATGAACTCATGCTTTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTATCTGTATATACCTCAGAGAATTCATGAACTCATGCTTTAA  985

seq1  CTGATGGTAAGATTTGCTTATCAAAGTCTTTTTACATTGATCAACAACAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGTAAGATTTGCTTATCAAAGTCTTTTTACATTGATCAACAACAG  1035

seq1  CTTAAACATTTTACAGTTTTCCAAAAACTGTAGCAGAGCTGTGAGCATGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACATTTTACAGTTTTCCAAAAACTGTAGCAGAGCTGTGAGCATGG  1085

seq1  AATTC  1104
      |||||
seq2  AATTC  1090

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information