BAC Information

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BAC

Clone NameB6Ng01-146K17
Chromosome9 (Build37)
Map Location 112,984,133 - 112,985,185
singlet/doubletsinglet
Overlap genenone
Upstream geneArpp21, LOC100039341, LOC620760, LOC100043800, EG622110, LOC100039391
Downstream geneLOC100043801, LOC100043802, LOC636680, Pdcd6ip, Clasp2, Ubp1, Fbxl2, Susd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146K17.bB6Ng01-146K17.g
ACCDH943747DH943748
length1,0481,175
definitionDH943747|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K17, 5' end.DH943748|Mus musculus domesticus DNA, BAC clone: B6Ng01-146K17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctttccctgtctccagcttgcctataaggtactcactttgt
tctctgtgttcaatctctctttgtatttcccatgagtctcaacttgtctt
ctgcaatgtgtttgcttaaataaaaggacaaacagatgttgacttccata
ttgtaaagcatacagaaaaggaacaattaatatatatccatgatagatct
acctgtctccagcattgatagctcttggaaacctgtattccatgtccact
ccacaaggcattgtcttcatttagatgcataggagagcttaattcagagc
tatattcaaatccactcagtgggagtcttcaattattctaagagatgaaa
ccaatgaatatttccatttaaaacatttgaaaagagtttccccaaatgta
ttcatacttttgcatttttaaaaacttttaatccagtctattgtcatcta
cttaaacagaggtaaatgtagttataaatggtttctgattatagttatta
tgcctagtcttaagctaagtatatatagaagataatgatggtgtagtgtg
tttttcctggattaagtagccacttaatgggaaatagatatcatgattta
agtgctcttagaattatccaatgttagacatgtatgcctaccacagcaca
cacacacacacatgcacacacacttcttatctgtctgcttgtatttcata
ggttcttttcttagcatatctctgccactgggagctcatcctggtcttgt
atggttttcacactagtgtaacatagtctgaatcccttggacagataaac
attgtccccatgtctcgtggatatgtagtgagcatctagtgcccaggcag
tgaccatgtgatcaggactgaaccttccctttgagaagcattttagacaa
ctaccctgatgtgttcactctagaatgttctgttggatgaagactcttat
cttatgttcctaagattgggatttgatcttgtaagcagtgtctttctgtt
ccacttggttcccatgactaattctggaagctccgatgctgtgacaac
gaattctcacctttaggaataccgaatggcagagaagcacctgaaaaaat
gttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagaagccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaaactggaaagaacccaga
tgcccctcaacagaggaatggatacaaaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagagcatcatcctgagtgaggtaacacaatcacaa
aggaactcacacaatatgtactcactgataagtggatactagcccaaaac
ctaggatacccacgatataagatacaatttcctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggga
acaaaacacccatggaaggagttacagaaacaaagtatggagctgagatg
aaaggatggaccatgtggagactgccatatccaagggatccaccccataa
tcagcttccaaatgctgacaccattgcatacactagcaagattttactga
aaggacccagatgtagctgtctcttgtgagactatgccggggcctagcaa
acacagaagtggatgctcacagtcagctaatggaatgatcacagggctcc
catggaggagctagaagaagtacccaggagctaaagggatctcaacccta
tagtggacaacattatgaacttaccagtacccctggagcttttgacttta
gcttgcatatgattcaaagatgggctagtcggccataatgggaagatgag
cccattgtacctcagaactttgttgggctcgttactaggtaaacccaggg
ccaatgtatggtagtgcgctacacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_112984133_112985185
seq2: B6Ng01-146K17.b_49_1096 (reverse)

seq1  GTTGTTCACAGCATACGGAGCTTGTCAGAATTAGTCATGGGAA-CAAGTG  49
      |||| ||||||||| ||||||||  |||||||||||||||||| ||||| 
seq2  GTTG-TCACAGCAT-CGGAGCTT-CCAGAATTAGTCATGGGAACCAAGT-  46

seq1  GGAACAGAAAGACACTTGCTTACAAGGATCAAATCACAATC-TAGGAACA  98
      ||||||||||||||| ||||||||| ||||||||| ||||| ||||||||
seq2  GGAACAGAAAGACAC-TGCTTACAA-GATCAAATCCCAATCTTAGGAACA  94

seq1  TAAGAT-AGAGTCTTCATCCCAACAGAACATTCTAGAGTGAACACATCAG  147
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  TAAGATAAGAGTCTTCAT-CCAACAGAACATTCTAGAGTGAACACATCAG  143

seq1  GGTAGTTGTCTAAAATTGCTTCTCAGAGGGAAGGTTCAGTCCTGATCACA  197
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  GGTAGTTGTCTAAAA-TGCTTCTCAAAGGGAAGGTTCAGTCCTGATCACA  192

seq1  TGGTCACTGCCTGGGCACTAGATGCTCACTACATATCCACGAGACATGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACTGCCTGGGCACTAGATGCTCACTACATATCCACGAGACATGGG  242

seq1  GACAATGTTTATCTGTCCAAGGGATTCAGACTATGTTACACTAGTGTGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGTTTATCTGTCCAAGGGATTCAGACTATGTTACACTAGTGTGAA  292

seq1  AACCATACAAGACCAGGATGAGCTCCCAGTGGCAGAGATATGCTAAGAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACAAGACCAGGATGAGCTCCCAGTGGCAGAGATATGCTAAGAAA  342

seq1  AGAACCTATGAAATACAAGCAGACAGATAAGAAGTGTGTGTGCATGTGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTATGAAATACAAGCAGACAGATAAGAAGTGTGTGTGCATGTGTG  392

seq1  TGTGTGTGTGCTGTGGTAGGCATACATGTCTAACATTGGATAATTCTAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGCTGTGGTAGGCATACATGTCTAACATTGGATAATTCTAAG  442

seq1  AGCACTTAAATCATGATATCTATTTCCCATTAAGTGGCTACTTAATCCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTAAATCATGATATCTATTTCCCATTAAGTGGCTACTTAATCCAG  492

seq1  GAAAAACACACTACACCATCATTATCTTCTATATATACTTAGCTTAAGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACACACTACACCATCATTATCTTCTATATATACTTAGCTTAAGAC  542

seq1  TAGGCATAATAACTATAATCAGAAACCATTTATAACTACATTTACCTCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATAATAACTATAATCAGAAACCATTTATAACTACATTTACCTCTG  592

seq1  TTTAAGTAGATGACAATAGACTGGATTAAAAGTTTTTAAAAATGCAAAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTAGATGACAATAGACTGGATTAAAAGTTTTTAAAAATGCAAAAG  642

seq1  TATGAATACATTTGGGGAAACTCTTTTCAAATGTTTTAAATGGAAATATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATACATTTGGGGAAACTCTTTTCAAATGTTTTAAATGGAAATATT  692

seq1  CATTGGTTTCATCTCTTAGAATAATTGAAGACTCCCACTGAGTGGATTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTTTCATCTCTTAGAATAATTGAAGACTCCCACTGAGTGGATTTG  742

seq1  AATATAGCTCTGAATTAAGCTCTCCTATGCATCTAAATGAAGACAATGCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCTCTGAATTAAGCTCTCCTATGCATCTAAATGAAGACAATGCC  792

seq1  TTGTGGAGTGGACATGGAATACAGGTTTCCAAGAGCTATCAATGCTGGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAGTGGACATGGAATACAGGTTTCCAAGAGCTATCAATGCTGGAG  842

seq1  ACAGGTAGATCTATCATGGATATATATTAATTGTTCCTTTTCTGTATGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTAGATCTATCATGGATATATATTAATTGTTCCTTTTCTGTATGCT  892

seq1  TTACAATATGGAAGTCAACATCTGTTTGTCCTTTTATTTAAGCAAACACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATATGGAAGTCAACATCTGTTTGTCCTTTTATTTAAGCAAACACA  942

seq1  TTGCAGAAGACAAGTTGAGACTCATGGGAAATACAAAGAGAGATTGAACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAAGACAAGTTGAGACTCATGGGAAATACAAAGAGAGATTGAACA  992

seq1  CAGAGAACAAAGTGAGTACCTTATAGGCAAGCTGGAGACAGGGAAAGAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACAAAGTGAGTACCTTATAGGCAAGCTGGAGACAGGGAAAGAAA  1042

seq1  GAATTC  1053
      ||||||
seq2  GAATTC  1048