BAC Information

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BAC

Clone NameB6Ng01-147G15
Chromosome9 (Build37)
Map Location 67,322,819 - 67,465,048
singlet/doubletdoublet
Overlap geneTln2, LOC100040253
Upstream geneHerc1, Fbxl22, Usp3, Car12, Aph1b, LOC623488, Aph1c, Rab8b, Rps27l, Lactb, Tpm1, LOC100041390
Downstream geneEG640799, LOC665794, 3300001A09Rik, EG244911, Vps13c, LOC100041451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147G15.bB6Ng01-147G15.g
ACCDH944305DH944306
length5361,162
definitionDH944305|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G15, 5' end.DH944306|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,464,507 - 67,465,048)(67,322,819 - 67,323,988)
sequence
ctattgttggggatgctatcaggctgtgtttttctttgcctcaggcactg
gctggagtggcctgggggtgcataggacaatggagacctctgtcctggaa
gtgacaggatgtttgttttcaaagttgggaaccgactgataggctgtttc
caaggtccacaggtacaggtgggtattaggctttaaacattaaaatgcag
gagctggggctgccggctcagttggtaaagtgcttgtctcgtgtggatca
agccctgagtttgatccctagtatcgtataagcagggtatggtggtgcgt
gtctactcagaagctacaccagggggttggaggctagcgaggtccacatg
tgactcaaggatacctaggaaatctgaacttgagagggattcttttagct
tgagtaggggatctgaaggctcccagtggaagtctggagaatgcgacctt
ttctgttattaaatgccagttatgtatgtaaactgttgttgtgttttgta
aaaagataagggagatgtttggtggaggtgaggtat
gaattcccctcccacaccagcaaggccaacagtgagcaaggaaaggacac
agccttaaatgatctgtaggaaatatgacctctggtctggtctgttcaca
ggtggaatacacatacatgcttgaggctactagaaaacatttgataccac
tgattaaaaagtctcctctaaagagtggagagcaaaaagcagcacactaa
ggccaggagaagagccctcaggctactgcgggcacctaacagttgaccat
tttcctcaagaaaagattgtgccttgtacaaagccagcgtatccagaagg
aaccccgtgggagaataagtggaaatctgggacccagaaggacccatcca
gcgcagcaccttcacctgttagcacgtgagaggcaaggagactaaaagct
gactctgggtatccctcttccctagagccttggaccagatgaagtggtaa
gacaggctgaggcctaacgggcaaacactatgtaatggtggttacactga
agaaaagagcctcagtcttctggacccattcactgaaacacagagggaat
gctgtgctacagagcctcgacttcaaaatcctcacccgagggtagggtct
agatcaaacaggagggtcaagctcggacactcactgaagaatacatgggg
attattacgtagtctatttgaaatttccaatggaaagctaacagccggca
agcaaagaggagaacagacggagggaaatggttctatttttcagttgtat
gtatgtgtaaatttgtgtacatgtgggtgcatgtctgtgctggcgtgctt
gcacgagtgtgcctgtatatgtggaggccagaggttgatgtctggtcatt
ctctctaataacacttcattatgtttctgaagcagagtctctcactgaag
ctggagtccaccgatcctgccagtctaactgcccagcttgccctgaggat
cctgcctctgcctcccaagcgcttggcttacagtgggagccacctcaccc
actagcttatttatgtgggtggcccaggtctgaaattcgtttccttatac
gtggcattggcaaggtgctttacccctgaccatcttcctagggcagaata
cttcatttagattgggccatagaacattttctgtaacactctaactctca
aagtgtgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_67464507_67465048
seq2: B6Ng01-147G15.b_45_586 (reverse)

seq1  ATACCTCACCTCCACCAAACATCTCCCTTATCTTTTTACAAAACACAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCACCTCCACCAAACATCTCCCTTATCTTTTTACAAAACACAACA  50

seq1  ACAGTTTACATACATAACTGGCATTTAATAACAGAAAAGGTCGCATTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTACATACATAACTGGCATTTAATAACAGAAAAGGTCGCATTCTC  100

seq1  CAGACTTCCACTGGGAGCCTTCAGATCCCCTACTCAAGCTAAAAGAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTCCACTGGGAGCCTTCAGATCCCCTACTCAAGCTAAAAGAATCC  150

seq1  CTCTCAAGTTCAGATTTCCTAGGTATCCTTGAGTCACATGTGGACCTCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGTTCAGATTTCCTAGGTATCCTTGAGTCACATGTGGACCTCGC  200

seq1  TAGCCTCCAACCCCCTGGTGTAGCTTCTGAGTAGACACGCACCACCATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCCAACCCCCTGGTGTAGCTTCTGAGTAGACACGCACCACCATAC  250

seq1  CCTGCTTATACGATACTAGGGATCAAACTCAGGGCTTGATCCACACGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTATACGATACTAGGGATCAAACTCAGGGCTTGATCCACACGAGA  300

seq1  CAAGCACTTTACCAACTGAGCCGGCAGCCCCAGCTCCTGCATTTTAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTTTACCAACTGAGCCGGCAGCCCCAGCTCCTGCATTTTAATGT  350

seq1  TTAAAGCCTAATACCCACCTGTACCTGTGGACCTTGGAAACAGCCTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCCTAATACCCACCTGTACCTGTGGACCTTGGAAACAGCCTATCA  400

seq1  GTCGGTTCCCAACTTTGAAAACAAACATCCTGTCACTTCCAGGACAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGTTCCCAACTTTGAAAACAAACATCCTGTCACTTCCAGGACAGAGG  450

seq1  TCTCCATTGTCCTATGCACCCCCAGGCCACTCCAGCCAGTGCCTGAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTGTCCTATGCACCCCCAGGCCACTCCAGCCAGTGCCTGAGGCA  500

seq1  AAGAAAAACACAGCCTGATAGCATCCCCAACAATAGGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACACAGCCTGATAGCATCCCCAACAATAGGAATTC  542

seq1: chr9_67322819_67323988
seq2: B6Ng01-147G15.g_68_1229

seq1  GAATTCCCCTCCCACACCAGCAAGGCCAACAGTGAGCAAGGAAAGGACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTCCCACACCAGCAAGGCCAACAGTGAGCAAGGAAAGGACAC  50

seq1  AGCCTTAAATGATCTGTAGGAAATATGACCTCTGGTCTGGTCTGTTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAAATGATCTGTAGGAAATATGACCTCTGGTCTGGTCTGTTCACA  100

seq1  GGTGGAATACACATACATGCTTGAGGCTACTAGAAAACATTTGATACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAATACACATACATGCTTGAGGCTACTAGAAAACATTTGATACCAC  150

seq1  TGATTAAAAAGTCTCCTCTAAAGAGTGGAGAGCAAAAAGCAGCACACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAAAAGTCTCCTCTAAAGAGTGGAGAGCAAAAAGCAGCACACTAA  200

seq1  GGCCAGGAGAAGAGCCCTCAGGCTACTGCGGGCACCTAACAGTTGACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGAGAAGAGCCCTCAGGCTACTGCGGGCACCTAACAGTTGACCAT  250

seq1  TTTCCTCAAGAAAAGATTGTGCCTTGTACAAAGCCAGCGTATCCAGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCAAGAAAAGATTGTGCCTTGTACAAAGCCAGCGTATCCAGAAGG  300

seq1  AACCCCGTGGGAGAATAAGTGGAAATCTGGGACCCAGAAGGACCCATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCGTGGGAGAATAAGTGGAAATCTGGGACCCAGAAGGACCCATCCA  350

seq1  GCGCAGCACCTTCACCTGTTAGCACGTGAGAGGCAAGGAGACTAAAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAGCACCTTCACCTGTTAGCACGTGAGAGGCAAGGAGACTAAAAGCT  400

seq1  GACTCTGGGTATCCCTCTTCCCTAGAGCCTTGGACCAGATGAAGTGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGGGTATCCCTCTTCCCTAGAGCCTTGGACCAGATGAAGTGGTAA  450

seq1  GACAGGCTGAGGCCTAACGGGCAAACACTATGTAATGGTGGTTACACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCTGAGGCCTAACGGGCAAACACTATGTAATGGTGGTTACACTGA  500

seq1  AGAAAAGAGCCTCAGTCTTCTGGACCCATTCACTGAAACACAGAGGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGCCTCAGTCTTCTGGACCCATTCACTGAAACACAGAGGGAAT  550

seq1  GCTGTGCTACAGAGCCTCGACTTCAAAATCCTCACCCGAGGGTAGGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCTACAGAGCCTCGACTTCAAAATCCTCACCCGAGGGTAGGGTCT  600

seq1  AGATCAAACAGGAGGGTCAAGCTCGGACACTCACTGAAGAATACATGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAACAGGAGGGTCAAGCTCGGACACTCACTGAAGAATACATGGGG  650

seq1  ATTATTACGTAGTCTATTTGAAATTTCCAATGGAAAGCTAACAGCCGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACGTAGTCTATTTGAAATTTCCAATGGAAAGCTAACAGCCGGCA  700

seq1  AGCAAAGAGGAGAACAGACGGAGGGAAATGGTTCTATTTTTCAGTTGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAGGAGAACAGACGGAGGGAAATGGTTCTATTTTTCAGTTGTAT  750

seq1  GTATGTGTAAATTTGTGTACATGTGGGTGCATGTCTGTGCTGGCGTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTAAATTTGTGTACATGTGGGTGCATGTCTGTGCTGGCGTGCTT  800

seq1  GCACGAGTGTGCCTGTATATGTGGAGGCCAGAGGTTGATGTCTGGTCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGAGTGTGCCTGTATATGTGGAGGCCAGAGGTTGATGTCTGGTCATT  850

seq1  CTCTCTAATAACACTTCATTATGTTTTCTGAAGCAGAGTCTCTCACTGAA  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTCTCTAATAACACTTCATTATG-TTTCTGAAGCAGAGTCTCTCACTGAA  899

seq1  GCTGGAGTCCACCGATCCTGCCAGTCTAACTGCCCAGCTTGCCCTGAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCTGGAGTCCACCGATCCTGCCAGTCTAACTGCCCAGCTTGCCCTGA-GG  948

seq1  ATCCTGCCTCTGCCTCCCAAGCGCTTGGCTTACAGTGGGAGCCACCTCAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCCTCTGCCTCCCAAGCGCTTGGCTTACAGTGGGAGCCACCTCAC  998

seq1  CCACTAGCTTATTTATGTGGGTGCCCAGGGTCTGAAATTCG-TTCCTTAT  1049
      ||||||||||||||||||||||| ||  ||||||||||||| ||||||||
seq2  CCACTAGCTTATTTATGTGGGTGGCCCAGGTCTGAAATTCGTTTCCTTAT  1048

seq1  ACGT-GCA-TGGCAA-GTGCTTTACCCACTGAACCATCTCCCTAGGCCAG  1096
      |||| ||| |||||| ||||||||||| ||| ||||||| |||||| |||
seq2  ACGTGGCATTGGCAAGGTGCTTTACCC-CTG-ACCATCTTCCTAGGGCAG  1096

seq1  AAATACTTCATTTTTAGGTAATTGTGTCAGTGAGACATTTTCTGTAACAA  1146
       |||||||||  |||||   |||| | ||  || |||||||||||||| |
seq2  -AATACTTCA--TTTAG---ATTGGGCCATAGA-ACATTTTCTGTAAC-A  1138

seq1  CTCTAAGCTC-CAAGATGTGTTTTT  1170
      |||||| ||| |||  |||||||||
seq2  CTCTAA-CTCTCAAAGTGTGTTTTT  1162