BAC Information

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BAC

Clone NameB6Ng01-149M13
Chromosome9 (Build37)
Map Location 64,412,539 - 64,412,871
singlet/doubletsinglet
Overlap geneMegf11
Upstream geneIqch, 2310007F21Rik, Smad3, LOC100040009, Smad6, 2600006L11Rik, Lctl, Zwilch, Rpl4, Snapc5, Map2k1, Uchl4, Tipin, Dis3l
Downstream geneRab11a, AI115600, F730015K02Rik, Slc24a1, 2010321M09Rik, Ptplad1, Dpp8, Nope, Punc, Parp16, Cilp, Clpx, Pdcd7, Gm514, 5430433E21Rik, Rasl12, Ostb, Mtfmt, Spg21, Ankdd1a, Plekhq1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149M13.bB6Ng01-149M13.g
ACCDH946030DH946031
length333209
definitionDH946030|Mus musculus domesticus DNA, BAC clone: B6Ng01-149M13, 5' end.DH946031|Mus musculus domesticus DNA, BAC clone: B6Ng01-149M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
catcctagggccaccttagggaattgacccttcgctcccctgccacccag
ctctgcaggtatcacccagctcctgggccatctttcaggtcttgcttgac
tgtttctttctatctggttctacgcttcctgagggcaggaactgttactc
tcttcctcagcagtacacagggctagtctgggtagacagtaatcagctgt
cccctggtccccttgactgtgatggatatccaaagaggtttagaactgag
catagactcagagtggtctgccctgttagtttttcgttgttaatcaaatt
gtattgacttgggtatgggtgtgggtgtgggtg
aaatatactttttaatatttattttattttaaaaacatttatgtatttgt
ttatatatgcatatatacttatatagatatatacacacatatacatacat
gtatgtatataaatacatgtgtgtgtgtatgtgtctgtataagtatatat
gcatatataaacaaatacataaattgctcataggacaccttgtgaaaatg
ggtactctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_64412539_64412871
seq2: B6Ng01-149M13.b_54_386 (reverse)

seq1  CACCCACACCCACACCCATACCCAAGTCAATACAATTTGATTAACAACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACACCCACACCCATACCCAAGTCAATACAATTTGATTAACAACGA  50

seq1  AAAACTAACAGGGCAGACCACTCTGAGTCTATGCTCAGTTCTAAACCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAACAGGGCAGACCACTCTGAGTCTATGCTCAGTTCTAAACCTCT  100

seq1  TTGGATATCCATCACAGTCAAGGGGACCAGGGGACAGCTGATTACTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATCCATCACAGTCAAGGGGACCAGGGGACAGCTGATTACTGTCT  150

seq1  ACCCAGACTAGCCCTGTGTACTGCTGAGGAAGAGAGTAACAGTTCCTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACTAGCCCTGTGTACTGCTGAGGAAGAGAGTAACAGTTCCTGCC  200

seq1  CTCAGGAAGCGTAGAACCAGATAGAAAGAAACAGTCAAGCAAGACCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAGCGTAGAACCAGATAGAAAGAAACAGTCAAGCAAGACCTGAA  250

seq1  AGATGGCCCAGGAGCTGGGTGATACCTGCAGAGCTGGGTGGCAGGGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCCCAGGAGCTGGGTGATACCTGCAGAGCTGGGTGGCAGGGGAGC  300

seq1  GAAGGGTCAATTCCCTAAGGTGGCCCTAGGATG  333
      |||||||||||||||||||||||||||||||||
seq2  GAAGGGTCAATTCCCTAAGGTGGCCCTAGGATG  333