BAC Information

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BAC

Clone NameB6Ng01-153P10
Chromosome9 (Build37)
Map Location 109,105,991 - 109,106,890
singlet/doubletsinglet
Overlap genenone
Upstream geneDag1, Nicn1, EG434437, Tcta, Rhoa, Gpx1, Usp4, LOC623859, 1700102P08Rik, Ccdc36, BC048562, Klhdc8b, LOC100042228, Ccdc71, Lamb2, Usp19, Qars, Qrich1, Impdh2, 4733401H18Rik, Dalrd3, Wdr6, 4933406E20Rik, Arih2, ENSMUSG00000074075, Slc25a20, Prkar2a, Ihpk2, Nckipsd, Celsr3, Slc26a6, LOC100038959, Tmem89, Uqcrc1, Col7a1, Pfkfb4, Scotin, Trex1, 6620401K05Rik, Ccdc72, Ccdc51, EG665413, Plxnb1, E330009P21Rik, Fbxw13
Downstream geneFbxw12, Fbxw14, LOC668758, EG382156, Fbxw16, Fbxw19, LOC635668, Fbxw15, EG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153P10.bB6Ng01-153P10.g
ACCDH949131DH949132
length1,176908
definitionDH949131|Mus musculus domesticus DNA, BAC clone: B6Ng01-153P10, 5' end.DH949132|Mus musculus domesticus DNA, BAC clone: B6Ng01-153P10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcttagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatataatttcctaaacacaagaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatctaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccaaatgtagctgtctattgtgagactatgcccgggacctagcaaa
cacagaagtggattctcacagtcagctaatggatggatcacagggctcca
aatggaggactagagaagtactcaaggagctaaagggatctgcaacccta
tagggggaacacataatgaactatcagtacctcgaagctcttgatctagc
tgctatgtatctaaagatggtcctagtcggcatcattgatagagaaagcc
attggcctccaaactttattgctccatatacgataaatttctcagtgtca
aaaggtggaatgggtgcgatagcgat
gaattcttgtgctcatcaatgaattgggaaacatagtgagctctttctta
aatgaacactcctacaaaaccatccacaaaccatatcaaaccaaccaaag
aaacaaaatccaggtacacatgcaaatgaagtaactttttgtgcttgtta
gtcatgcagtgggggctgcccatcagtaacctgcaacaaggcaagacaag
cactttcaggtgcctttaaatgcaattttgtgcttcagctaaaactagaa
aaaaaataggctgaagtattttttttaatctatgtttataccttaggaac
atgtgttctttgaactcacccagggatactgacccaagtgtgcagtccat
gactcctggagtaggactttaaattgagcatgctcaggaggtgcctgacc
cttaagtgccttcccatatgaatgtgtacaggatcccagagtaaatcctc
ccagtccctttctttcctgagggcacttctcttccatgcccttttgtttt
ttctttgcactcaccaggacatgacccagctgtgttcattcacgctgact
gatactctgtgacagtttgtcccagaaggcaggcagccactaagacactg
gtgaatgggtagtgtatagagtgggcatatgttggacacaactgtgattc
atgcccaggattcccatcagggggaaggggggaatatttcttcaaactgc
tcagagtgatgtggggtggagggctaatgttcaaggtcaacctgactgca
tttgtgacccggataggagacccatcttggggactcctttatgatggatt
gtctcctcttacaccagtgagcagaaataaactgctccttaagtttcctt
tttatcagatactttaattggcacaacaatgagaaaaagccccctgtgta
atatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_109105991_109106890
seq2: B6Ng01-153P10.g_69_976

seq1  GAATTCTTGTGCTCATCAATGAATTGGGAAACATAGTGAGCTCTTTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGCTCATCAATGAATTGGGAAACATAGTGAGCTCTTTCTTA  50

seq1  AATGAACACTCCTACAAAACCATCCACAAACCATATCAAACCAACCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACACTCCTACAAAACCATCCACAAACCATATCAAACCAACCAAAG  100

seq1  AAACAAAATCCAGGTACACATGCAAATGAAGTAACTTTTTGTGCTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATCCAGGTACACATGCAAATGAAGTAACTTTTTGTGCTTGTTA  150

seq1  GTCATGCAGTGGGGGCTGCCCATCAGTAACCTGCAACAAGGCAAGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCAGTGGGGGCTGCCCATCAGTAACCTGCAACAAGGCAAGACAAG  200

seq1  CACTTTCAGGTGCCTTTAAATGCAATTTTGTGCTTCAGCTAAAACTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCAGGTGCCTTTAAATGCAATTTTGTGCTTCAGCTAAAACTAGAA  250

seq1  AAAAAATAGGCTGAAGTATTTTTTTTAATCTATGTTTATACCTTAGGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGGCTGAAGTATTTTTTTTAATCTATGTTTATACCTTAGGAAC  300

seq1  ATGTGTTCTTTGAACTCACCCAGGGATACTGACCCAAGTGTGCAGTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTCTTTGAACTCACCCAGGGATACTGACCCAAGTGTGCAGTCCAT  350

seq1  GACTCCTGGAGTAGGACTTTAAATTGAGCATGCTCAGGAGGTGCCTGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTGGAGTAGGACTTTAAATTGAGCATGCTCAGGAGGTGCCTGACC  400

seq1  CTTAAGTGCCTTCCCATATGAATGTGTACAGGATCCCAGAGTAAATCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTGCCTTCCCATATGAATGTGTACAGGATCCCAGAGTAAATCCTC  450

seq1  CCAGTCCCTTTCTTTCCTGAGGGCACTTCTCTTCCATGCCCTTTTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCCTTTCTTTCCTGAGGGCACTTCTCTTCCATGCCCTTTTGTTTT  500

seq1  TTCTTTGCACTCACCAGGACATGACCCAGCTGTGTTCATTCACGCTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCACTCACCAGGACATGACCCAGCTGTGTTCATTCACGCTGACT  550

seq1  GATACTCTGTGACAGTTTGTCCCAGAAGGCAGGCAGCCACTAAGACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCTGTGACAGTTTGTCCCAGAAGGCAGGCAGCCACTAAGACACTG  600

seq1  GTGAATGGGTAGTGTATAGAGTGGGCATATGTTGGACACAACTGTGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGGTAGTGTATAGAGTGGGCATATGTTGGACACAACTGTGATTC  650

seq1  ATGCCCAGGATTCCCATCAGGGG--AAGGGGGAATATTTCTTCAAACTGC  698
      |||||||||||||||||||||||  | |||||||||||||||||||||||
seq2  ATGCCCAGGATTCCCATCAGGGGGAAGGGGGGAATATTTCTTCAAACTGC  700

seq1  TCAGAGTGATGT-GGGTGGA-GGCTAATGTTCAAGGTCAACCTGACTGCA  746
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  TCAGAGTGATGTGGGGTGGAGGGCTAATGTTCAAGGTCAACCTGACTGCA  750

seq1  TTTGTGACCC-GATAGGAGACCCATCTTGGGGACTCCATTATGATGGACT  795
      |||||||||| |||||||||||||||||||||||||| |||||||||| |
seq2  TTTGTGACCCGGATAGGAGACCCATCTTGGGGACTCCTTTATGATGGATT  800

seq1  GTCTCCTCTTACACCAGTGAGCAGAAATAAACTGCTCCTTAAG-TTGCTT  844
      ||||||||||||||||||||||||||||||||||||||||||| || |||
seq2  GTCTCCTCTTACACCAGTGAGCAGAAATAAACTGCTCCTTAAGTTTCCTT  850

seq1  TTTATCAGATAC-TTAATTGTCACAACAATGAG-AAAAGTCACCAGTGTA  892
      |||||||||||| ||||||| |||||||||||| ||||| | || |||||
seq2  TTTATCAGATACTTTAATTGGCACAACAATGAGAAAAAGCCCCCTGTGTA  900

seq1  ATATACTT  900
      ||||| ||
seq2  ATATATTT  908